RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 ZEB2O60315 1214 aa7.02□□□□□ -1.29
CXXC4-202ENST00000466963 TIMP1P01033 207 aa7.02□□□□□ -1.29
CXXC4-202ENST00000466963 DSG3P32926 999 aa7.02□□□□□ -1.29
CXXC4-202ENST00000466963 NT5C2P49902 561 aa7.02□□□□□ -1.29
CXXC4-202ENST00000466963 PTPN11Q06124 597 aaPredicted RBP7.02□□□□□ -1.29
CXXC4-202ENST00000466963 MFSD5Q6N075 450 aa7.02□□□□□ -1.29
CXXC4-202ENST00000466963 CATSPERGQ6ZRH7 1159 aa7.02□□□□□ -1.29
CXXC4-202ENST00000466963 ARHGAP45Q92619 1136 aa7.02□□□□□ -1.29
CXXC4-202ENST00000466963 TIFAQ96CG3 184 aa7.02□□□□□ -1.29
CXXC4-202ENST00000466963 PRKRIP1Q9H875 184 aaPredicted RBP7.02□□□□□ -1.29
CXXC4-202ENST00000466963 CABP5Q9NP86 173 aa7.02□□□□□ -1.29
CXXC4-202ENST00000466963 DIS3LQ8TF46 1054 aaKnown RBP7.01□□□□□ -1.29
CXXC4-202ENST00000466963 BORCS6Q96GS4 357 aa7.01□□□□□ -1.29
CXXC4-202ENST00000466963 API5Q9BZZ5 524 aaKnown RBP7.01□□□□□ -1.29
CXXC4-202ENST00000466963 UPF3AQ9H1J1 476 aaKnown RBP7.01□□□□□ -1.29
CXXC4-202ENST00000466963 FSD2A1L4K1 749 aa7.01□□□□□ -1.29
CXXC4-202ENST00000466963 RARBP10826 455 aa7.01□□□□□ -1.29
CXXC4-202ENST00000466963 BTDP43251 543 aa7.01□□□□□ -1.29
CXXC4-202ENST00000466963 SPP2Q13103 211 aa7.01□□□□□ -1.29
CXXC4-202ENST00000466963 NEUROD2Q15784 382 aa7.01□□□□□ -1.29
CXXC4-202ENST00000466963 SUCLG2Q96I99 432 aa7.01□□□□□ -1.29
CXXC4-202ENST00000466963 CCDC17Q96LX7 622 aa7.01□□□□□ -1.29
CXXC4-202ENST00000466963 SAMD11Q96NU1 681 aa7.01□□□□□ -1.29
CXXC4-202ENST00000466963 KPNA6O60684 536 aa7.01□□□□□ -1.29
CXXC4-202ENST00000466963 GNAI3P08754 354 aa7.01□□□□□ -1.29
CXXC4-202ENST00000466963 AKR1A1P14550 325 aa7.01□□□□□ -1.29
CXXC4-202ENST00000466963 RFX5P48382 616 aaPredicted RBP7.01□□□□□ -1.29
CXXC4-202ENST00000466963 RHBDL3P58872 404 aa7.01□□□□□ -1.29
CXXC4-202ENST00000466963 TMEM31Q5JXX7 168 aa7.01□□□□□ -1.29
CXXC4-202ENST00000466963 MIGA2Q7L4E1 593 aa7.01□□□□□ -1.29
CXXC4-202ENST00000466963 UHRF1Q96T88 793 aaPredicted RBP7.01□□□□□ -1.29
CXXC4-202ENST00000466963 RBPJLQ9UBG7 517 aa7.01□□□□□ -1.29
CXXC4-202ENST00000466963 FBXO40Q9UH90 709 aa7.01□□□□□ -1.29
CXXC4-202ENST00000466963 PCDHAC2Q9Y5I4 1007 aa7.01□□□□□ -1.29
CXXC4-202ENST00000466963 AOX1Q06278 1338 aa7□□□□□ -1.29
CXXC4-202ENST00000466963 PRR33A8MZF0 331 aa7□□□□□ -1.29
CXXC4-202ENST00000466963 GTPBP6O43824 516 aaPredicted RBP7□□□□□ -1.29
CXXC4-202ENST00000466963 ALADP13716 330 aa7□□□□□ -1.29
CXXC4-202ENST00000466963 MAP3K12Q12852 859 aa7□□□□□ -1.29
CXXC4-202ENST00000466963 CCDC146Q8IYE0 955 aa7□□□□□ -1.29
CXXC4-202ENST00000466963 ZNF576Q9H609 170 aa7□□□□□ -1.29
CXXC4-202ENST00000466963 PRKAG3Q9UGI9 489 aa7□□□□□ -1.29
CXXC4-202ENST00000466963 A0A0U1RQG5 324 aaPredicted RBP7□□□□□ -1.29
CXXC4-202ENST00000466963 TRIM75PA6NK02 468 aa7□□□□□ -1.29
CXXC4-202ENST00000466963 PLIN1O60240 522 aa7□□□□□ -1.29
CXXC4-202ENST00000466963 ACTN1P12814 892 aa7□□□□□ -1.29
CXXC4-202ENST00000466963 OAZ1P54368 228 aa7□□□□□ -1.29
CXXC4-202ENST00000466963 TKFCQ3LXA3 575 aa7□□□□□ -1.29
CXXC4-202ENST00000466963 G2E3Q7L622 706 aa7□□□□□ -1.29
CXXC4-202ENST00000466963 SENP6Q9GZR1 1112 aaPredicted RBP7□□□□□ -1.29
CXXC4-202ENST00000466963 BICC1Q9H694 974 aaKnown RBP7□□□□□ -1.29
CXXC4-202ENST00000466963 IL23AQ9NPF7 189 aa7□□□□□ -1.29
CXXC4-202ENST00000466963 ZBTB21Q9ULJ3 1066 aa7□□□□□ -1.29
CXXC4-202ENST00000466963 FZD1Q9UP38 647 aa7□□□□□ -1.29
CXXC4-202ENST00000466963 ATP2A1O14983 1001 aa6.99□□□□□ -1.29
CXXC4-202ENST00000466963 RAG1P15918 1043 aa6.99□□□□□ -1.29
CXXC4-202ENST00000466963 CYP2B6P20813 491 aa6.99□□□□□ -1.29
CXXC4-202ENST00000466963 COG2Q14746 738 aa6.99□□□□□ -1.29
CXXC4-202ENST00000466963 SHHQ15465 462 aa6.99□□□□□ -1.29
CXXC4-202ENST00000466963 MAMDC4Q6UXC1 1216 aa6.99□□□□□ -1.29
CXXC4-202ENST00000466963 TSPYL6Q8N831 410 aa6.99□□□□□ -1.29
CXXC4-202ENST00000466963 ADAMTS19Q8TE59 1207 aa6.99□□□□□ -1.29
CXXC4-202ENST00000466963 SLC9A7Q96T83 725 aa6.99□□□□□ -1.29
CXXC4-202ENST00000466963 SCAF8Q9UPN6 1271 aaKnown RBP6.99□□□□□ -1.29
CXXC4-202ENST00000466963 BAIAP3O94812 1187 aa6.99□□□□□ -1.29
CXXC4-202ENST00000466963 HMGCS2P54868 508 aa6.99□□□□□ -1.29
CXXC4-202ENST00000466963 TREML2Q5T2D2 321 aa6.99□□□□□ -1.29
CXXC4-202ENST00000466963 Q7L0L9 218 aa6.99□□□□□ -1.29
CXXC4-202ENST00000466963 FAM184BQ9ULE4 1060 aa6.99□□□□□ -1.29
CXXC4-202ENST00000466963 WDR46O15213 610 aaKnown RBP6.98□□□□□ -1.29
CXXC4-202ENST00000466963 DUSP11O75319 330 aaKnown RBP6.98□□□□□ -1.29
CXXC4-202ENST00000466963 SUPT20HL2P0C7V6 817 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 NFIAQ12857 509 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 LRRC41Q15345 812 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 EPHA10Q5JZY3 1008 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 SH3BP5LQ7L8J4 393 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 TEX11Q8IYF3 940 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 CRACR2BQ8N4Y2 399 aaPredicted RBP6.98□□□□□ -1.29
CXXC4-202ENST00000466963 CCDC155Q8N6L0 562 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 UPF3BQ9BZI7 483 aaKnown RBP6.98□□□□□ -1.29
CXXC4-202ENST00000466963 CTNNA3Q9UI47 895 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 PI4K2BG5E9Z4 385 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 FCER1AP12319 257 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 DNAJB2P25686 324 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 CCDC102BQ68D86 513 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 ATG9AQ7Z3C6 839 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 DPP9Q86TI2 863 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 RIOX2Q8IUF8 465 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 SLC44A5Q8NCS7 719 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.98□□□□□ -1.29
CXXC4-202ENST00000466963 NSUN4Q96CB9 384 aaKnown RBP6.98□□□□□ -1.29
CXXC4-202ENST00000466963 TBX21Q9UL17 535 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 LRRFIP1Q32MZ4 808 aaKnown RBP6.98□□□□□ -1.29
CXXC4-202ENST00000466963 CDAN1Q8IWY9 1227 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 SLC43A3Q8NBI5 491 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 KLHDC9Q8NEP7 349 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 MYLIPQ8WY64 445 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 KAZALD1Q96I82 304 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 TTYH1Q9H313 450 aaPredicted RBP6.98□□□□□ -1.29
CXXC4-202ENST00000466963 ARHGEF10LQ9HCE6 1279 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms