RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 ATF5Q9Y2D1 282 aaPredicted RBP9.69□□□□□ -0.86
HPS4-209ENST00000466781 ATP2B4P23634 1241 aa9.69□□□□□ -0.86
HPS4-209ENST00000466781 ADCY7P51828 1080 aa9.69□□□□□ -0.86
HPS4-209ENST00000466781 SEPT6Q14141 434 aa9.69□□□□□ -0.86
HPS4-209ENST00000466781 GCKRQ14397 625 aa9.69□□□□□ -0.86
HPS4-209ENST00000466781 USH1GQ495M9 461 aa9.69□□□□□ -0.86
HPS4-209ENST00000466781 ZNF365Q70YC5 407 aa9.69□□□□□ -0.86
HPS4-209ENST00000466781 ZNF496Q96IT1 587 aaPredicted RBP9.69□□□□□ -0.86
HPS4-209ENST00000466781 ANO3Q9BYT9 981 aa9.69□□□□□ -0.86
HPS4-209ENST00000466781 NDUFB9Q9Y6M9 179 aa9.69□□□□□ -0.86
HPS4-209ENST00000466781 SPATA31A3Q5VYP0 1347 aa9.69□□□□□ -0.86
HPS4-209ENST00000466781 DEXIO95424 95 aa9.69□□□□□ -0.86
HPS4-209ENST00000466781 OATP04181 439 aa9.69□□□□□ -0.86
HPS4-209ENST00000466781 CTSWP56202 376 aa9.69□□□□□ -0.86
HPS4-209ENST00000466781 PIK3AP1Q6ZUJ8 805 aa9.69□□□□□ -0.86
HPS4-209ENST00000466781 ARHGEF25Q86VW2 580 aa9.69□□□□□ -0.86
HPS4-209ENST00000466781 CLSTN2Q9H4D0 955 aa9.69□□□□□ -0.86
HPS4-209ENST00000466781 ARMT1Q9H993 441 aa9.69□□□□□ -0.86
HPS4-209ENST00000466781 UTP11Q9Y3A2 253 aaKnown RBP9.69□□□□□ -0.86
HPS4-209ENST00000466781 CSADQ9Y600 493 aa9.69□□□□□ -0.86
HPS4-209ENST00000466781 TTC36A6NLP5 189 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 IRX5P78411 483 aaPredicted RBP9.68□□□□□ -0.86
HPS4-209ENST00000466781 TRIM14Q14142 442 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 FAM47CQ5HY64 1035 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 ARFGAP2Q8N6H7 521 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 PALM3A6NDB9 673 aaPredicted RBP9.68□□□□□ -0.86
HPS4-209ENST00000466781 KIF11P52732 1056 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 YWHAEP62258 255 aaKnown RBP9.68□□□□□ -0.86
HPS4-209ENST00000466781 CEP85LQ5SZL2 805 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 MRRFQ96E11 262 aaKnown RBP9.68□□□□□ -0.86
HPS4-209ENST00000466781 KCNQ3O43525 872 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 BLMP54132 1417 aaPredicted RBP9.68□□□□□ -0.86
HPS4-209ENST00000466781 TNS3Q68CZ2 1445 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 JCADQ9P266 1359 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 GOLGA6CA6NDK9 693 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 GOLGA6BA6NDN3 693 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 AKR1B15C9JRZ8 316 aaPredicted RBP9.68□□□□□ -0.86
HPS4-209ENST00000466781 GOLGA6DP0CG33 693 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 SARNPP82979 210 aaKnown RBP9.68□□□□□ -0.86
HPS4-209ENST00000466781 TYRO3Q06418 890 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 CCDC122Q5T0U0 273 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 TBC1D32Q96NH3 1257 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 CCDC94Q9BW85 323 aaPredicted RBP9.68□□□□□ -0.86
HPS4-209ENST00000466781 GOLGA6AQ9NYA3 693 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 USTQ9Y2C2 406 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 TTLL3Q9Y4R7 772 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 ALKQ9UM73 1620 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 VIMP08670 466 aaKnown RBP9.68□□□□□ -0.86
HPS4-209ENST00000466781 DCUN1D2Q6PH85 259 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 CCDC89Q8N998 374 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 PPFIBP2Q8ND30 876 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 XAGE2Q96GT9 111 aa9.68□□□□□ -0.86
HPS4-209ENST00000466781 RHOXF2BP0C7M4 288 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 TXKP42681 527 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 NBPF11Q86T75 865 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 CPXCR1Q8N123 301 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 MYCT1Q8N699 235 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 FAM193BQ96PV7 902 aaPredicted RBP9.67□□□□□ -0.86
HPS4-209ENST00000466781 RHOXF2Q9BQY4 288 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 IFNKQ9P0W0 207 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 AK2P54819 239 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 TIMM10P62072 90 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 LACTBP83111 547 aaPredicted RBP9.67□□□□□ -0.86
HPS4-209ENST00000466781 LPIN2Q92539 896 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 GTF3C6Q969F1 213 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 RAB3IPQ96QF0 476 aaPredicted RBP9.67□□□□□ -0.86
HPS4-209ENST00000466781 AATFQ9NY61 560 aaKnown RBP eCLIP9.67□□□□□ -0.86
HPS4-209ENST00000466781 UNC13BO14795 1591 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 A0A1B0GUL7 405 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 B4E1Z4 1266 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 ZEB2O60315 1214 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 SLC1A4P43007 532 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 NLRX1Q86UT6 975 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 TMEM87BQ96K49 555 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.67□□□□□ -0.862e-7■□□□□ 11.1
HPS4-209ENST00000466781 CETN3O15182 167 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 ACTN4O43707 911 aaKnown RBP9.67□□□□□ -0.86
HPS4-209ENST00000466781 NSMFQ6X4W1 530 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 TBC1D22AQ8WUA7 517 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 VPS18Q9P253 973 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 DNM3Q9UQ16 869 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 TCP10Q12799 353 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 GKAP1Q5VSY0 366 aaPredicted RBP9.67□□□□□ -0.86
HPS4-209ENST00000466781 CASC4Q6P4E1 433 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 OTUD6AQ7L8S5 288 aa9.67□□□□□ -0.86
HPS4-209ENST00000466781 DNAJC21Q5F1R6 531 aaKnown RBP9.66□□□□□ -0.86
HPS4-209ENST00000466781 SUCLG2Q96I99 432 aa9.66□□□□□ -0.86
HPS4-209ENST00000466781 CHL1O00533 1208 aa9.66□□□□□ -0.86
HPS4-209ENST00000466781 GCNT3O95395 438 aa9.66□□□□□ -0.86
HPS4-209ENST00000466781 PLA2R1Q13018 1463 aa9.66□□□□□ -0.86
HPS4-209ENST00000466781 TNNI3KQ59H18 835 aa9.66□□□□□ -0.86
HPS4-209ENST00000466781 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.66□□□□□ -0.865e-8■■■■■ 32.9
HPS4-209ENST00000466781 FPGT-TNNI3KV9GXZ4 949 aa9.66□□□□□ -0.86
HPS4-209ENST00000466781 AATKQ6ZMQ8 1374 aa9.66□□□□□ -0.86
HPS4-209ENST00000466781 MAP3K15Q6ZN16 1313 aa9.66□□□□□ -0.86
HPS4-209ENST00000466781 SLC12A2P55011 1212 aa9.66□□□□□ -0.86
HPS4-209ENST00000466781 PLCB4Q15147 1175 aa9.66□□□□□ -0.86
HPS4-209ENST00000466781 ATL3Q6DD88 541 aa9.66□□□□□ -0.86
HPS4-209ENST00000466781 MICALL1Q8N3F8 863 aa9.66□□□□□ -0.86
HPS4-209ENST00000466781 NCAPGQ9BPX3 1015 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms