RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 SEPT4O43236 478 aa18.27■□□□□ 0.52
HMGXB4-206ENST00000466438 CNMDO75829 334 aa18.27■□□□□ 0.52
HMGXB4-206ENST00000466438 BMP1P13497 986 aa18.27■□□□□ 0.52
HMGXB4-206ENST00000466438 EXOSC9Q06265 439 aaKnown RBP18.27■□□□□ 0.52
HMGXB4-206ENST00000466438 ADGRE1Q14246 886 aa18.27■□□□□ 0.52
HMGXB4-206ENST00000466438 ANO1Q5XXA6 986 aa18.27■□□□□ 0.52
HMGXB4-206ENST00000466438 ATG9AQ7Z3C6 839 aa18.27■□□□□ 0.52
HMGXB4-206ENST00000466438 CXXC1Q9P0U4 656 aaPredicted RBP18.27■□□□□ 0.52
HMGXB4-206ENST00000466438 XIRP2A4UGR9 3374 aa18.26■□□□□ 0.51
HMGXB4-206ENST00000466438 RFX5P48382 616 aaPredicted RBP18.26■□□□□ 0.51
HMGXB4-206ENST00000466438 LRRC41Q15345 812 aa18.26■□□□□ 0.51
HMGXB4-206ENST00000466438 OLFML2BQ68BL8 750 aa18.26■□□□□ 0.51
HMGXB4-206ENST00000466438 PBX4Q9BYU1 374 aa18.26■□□□□ 0.51
HMGXB4-206ENST00000466438 TSPYL2Q9H2G4 693 aaPredicted RBP18.26■□□□□ 0.51
HMGXB4-206ENST00000466438 JAG1P78504 1218 aa18.25■□□□□ 0.51
HMGXB4-206ENST00000466438 MECOMQ03112 1051 aa18.25■□□□□ 0.51
HMGXB4-206ENST00000466438 RASGRF1Q13972 1273 aa18.25■□□□□ 0.51
HMGXB4-206ENST00000466438 TMEM31Q5JXX7 168 aa18.25■□□□□ 0.51
HMGXB4-206ENST00000466438 CCDC102BQ68D86 513 aa18.25■□□□□ 0.51
HMGXB4-206ENST00000466438 EMILIN3Q9NT22 766 aa18.25■□□□□ 0.51
HMGXB4-206ENST00000466438 GINM1Q9NU53 330 aa18.25■□□□□ 0.51
HMGXB4-206ENST00000466438 PI4KBQ9UBF8 816 aa18.25■□□□□ 0.51
HMGXB4-206ENST00000466438 TCF20Q9UGU0 1960 aaKnown RBP18.24■□□□□ 0.51
HMGXB4-206ENST00000466438 IGFBP4P22692 258 aa18.24■□□□□ 0.51
HMGXB4-206ENST00000466438 PBX2P40425 430 aa18.24■□□□□ 0.51
HMGXB4-206ENST00000466438 USP17L2Q6R6M4 530 aa18.24■□□□□ 0.51
HMGXB4-206ENST00000466438 CCDC129Q6ZRS4 1044 aa18.24■□□□□ 0.51
HMGXB4-206ENST00000466438 ZNF384Q8TF68 577 aa18.24■□□□□ 0.51
HMGXB4-206ENST00000466438 SNX27Q96L92 541 aa18.24■□□□□ 0.51
HMGXB4-206ENST00000466438 EPHX3Q9H6B9 360 aa18.24■□□□□ 0.51
HMGXB4-206ENST00000466438 CEP126Q9P2H0 1117 aa18.24■□□□□ 0.51
HMGXB4-206ENST00000466438 PHF24Q9UPV7 400 aa18.24■□□□□ 0.51
HMGXB4-206ENST00000466438 SIPA1L1O43166 1804 aa18.23■□□□□ 0.51
HMGXB4-206ENST00000466438 ZNF236Q9UL36 1845 aa18.23■□□□□ 0.51
HMGXB4-206ENST00000466438 MYO9BQ13459 2157 aa18.23■□□□□ 0.51
HMGXB4-206ENST00000466438 PLXNA1Q9UIW2 1896 aa18.23■□□□□ 0.51
HMGXB4-206ENST00000466438 AAK1Q2M2I8 961 aa18.23■□□□□ 0.51
HMGXB4-206ENST00000466438 FAM47AQ5JRC9 791 aa18.23■□□□□ 0.51
HMGXB4-206ENST00000466438 ERICH6Q7L0X2 663 aa18.23■□□□□ 0.51
HMGXB4-206ENST00000466438 ALYREFQ86V81 257 aaKnown RBP18.23■□□□□ 0.51
HMGXB4-206ENST00000466438 POTEDQ86YR6 584 aa18.23■□□□□ 0.51
HMGXB4-206ENST00000466438 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.23■□□□□ 0.51
HMGXB4-206ENST00000466438 TMEM39AQ9NV64 488 aa18.23■□□□□ 0.51
HMGXB4-206ENST00000466438 FBXO3Q9UK99 471 aa18.23■□□□□ 0.51
HMGXB4-206ENST00000466438 ZBTB21Q9ULJ3 1066 aa18.23■□□□□ 0.51
HMGXB4-206ENST00000466438 USP17L15C9J2P7 530 aa18.22■□□□□ 0.51
HMGXB4-206ENST00000466438 USP17L13C9JLJ4 530 aa18.22■□□□□ 0.51
HMGXB4-206ENST00000466438 USP17L11C9JVI0 530 aa18.22■□□□□ 0.51
HMGXB4-206ENST00000466438 USP17L18D6R9N7 530 aa18.22■□□□□ 0.51
HMGXB4-206ENST00000466438 USP17L22D6RA61 530 aa18.22■□□□□ 0.51
HMGXB4-206ENST00000466438 USP17L17D6RBQ6 530 aa18.22■□□□□ 0.51
HMGXB4-206ENST00000466438 USP17L19D6RCP7 530 aa18.22■□□□□ 0.51
HMGXB4-206ENST00000466438 USP17L20D6RJB6 530 aa18.22■□□□□ 0.51
HMGXB4-206ENST00000466438 PQBP1O60828 265 aaKnown RBP18.22■□□□□ 0.51
HMGXB4-206ENST00000466438 CIAO1O76071 339 aa18.22■□□□□ 0.51
HMGXB4-206ENST00000466438 USP17L24Q0WX57 530 aa18.22■□□□□ 0.51
HMGXB4-206ENST00000466438 LBX2Q6XYB7 198 aa18.22■□□□□ 0.51
HMGXB4-206ENST00000466438 DPP9Q86TI2 863 aa18.22■□□□□ 0.51
HMGXB4-206ENST00000466438 C12orf42Q96LP6 360 aa18.22■□□□□ 0.51
HMGXB4-206ENST00000466438 DHX36Q9H2U1 1008 aaKnown RBP18.22■□□□□ 0.51
HMGXB4-206ENST00000466438 MUC6Q6W4X9 2439 aa18.22■□□□□ 0.51
HMGXB4-206ENST00000466438 GRXCR1A8MXD5 290 aa18.21■□□□□ 0.51
HMGXB4-206ENST00000466438 LDHCP07864 332 aa18.21■□□□□ 0.51
HMGXB4-206ENST00000466438 ADORA1P30542 326 aa18.21■□□□□ 0.51
HMGXB4-206ENST00000466438 GSTO1P78417 241 aa18.21■□□□□ 0.51
HMGXB4-206ENST00000466438 SHROOM1Q2M3G4 852 aaPredicted RBP18.21■□□□□ 0.51
HMGXB4-206ENST00000466438 RASIP1Q5U651 963 aa18.21■□□□□ 0.51
HMGXB4-206ENST00000466438 TEX11Q8IYF3 940 aa18.21■□□□□ 0.51
HMGXB4-206ENST00000466438 DNAJC18Q9H819 358 aa18.21■□□□□ 0.51
HMGXB4-206ENST00000466438 BTBD7Q9P203 1132 aa18.21■□□□□ 0.51
HMGXB4-206ENST00000466438 REV3LO60673 3130 aa18.2■□□□□ 0.5
HMGXB4-206ENST00000466438 GDF11O95390 407 aa18.2■□□□□ 0.5
HMGXB4-206ENST00000466438 ADORA2AP29274 412 aa18.2■□□□□ 0.5
HMGXB4-206ENST00000466438 CCDC174Q6PII3 467 aa18.2■□□□□ 0.5
HMGXB4-206ENST00000466438 METTL16Q86W50 562 aaKnown RBP18.2■□□□□ 0.5
HMGXB4-206ENST00000466438 SLC44A5Q8NCS7 719 aa18.2■□□□□ 0.5
HMGXB4-206ENST00000466438 SIL1Q9H173 461 aa18.2■□□□□ 0.5
HMGXB4-206ENST00000466438 MRS2Q9HD23 443 aa18.2■□□□□ 0.5
HMGXB4-206ENST00000466438 CHD7Q9P2D1 2997 aa18.2■□□□□ 0.5
HMGXB4-206ENST00000466438 TFF2Q03403 129 aa18.19■□□□□ 0.5
HMGXB4-206ENST00000466438 FAAP100Q0VG06 881 aa18.19■□□□□ 0.5
HMGXB4-206ENST00000466438 RAB30Q15771 203 aa18.19■□□□□ 0.5
HMGXB4-206ENST00000466438 CATSPERGQ6ZRH7 1159 aa18.19■□□□□ 0.5
HMGXB4-206ENST00000466438 ANKRD33Q7Z3H0 272 aa18.19■□□□□ 0.5
HMGXB4-206ENST00000466438 TOX2Q96NM4 488 aa18.19■□□□□ 0.5
HMGXB4-206ENST00000466438 A0A1W2PQ45 241 aaPredicted RBP18.18■□□□□ 0.5
HMGXB4-206ENST00000466438 A0A1W2PQY0 241 aa18.18■□□□□ 0.5
HMGXB4-206ENST00000466438 STRNO43815 780 aa18.18■□□□□ 0.5
HMGXB4-206ENST00000466438 GPR37L1O60883 481 aa18.18■□□□□ 0.5
HMGXB4-206ENST00000466438 TIMP1P01033 207 aa18.18■□□□□ 0.5
HMGXB4-206ENST00000466438 KCNQ1P51787 676 aa18.18■□□□□ 0.5
HMGXB4-206ENST00000466438 PPIGQ13427 754 aaKnown RBP eCLIP18.18■□□□□ 0.5
HMGXB4-206ENST00000466438 TMEM240Q5SV17 173 aa18.18■□□□□ 0.5
HMGXB4-206ENST00000466438 RNF180Q86T96 592 aa18.18■□□□□ 0.5
HMGXB4-206ENST00000466438 FOXP4Q8IVH2 680 aaPredicted RBP18.18■□□□□ 0.5
HMGXB4-206ENST00000466438 CRACR2BQ8N4Y2 399 aaPredicted RBP18.18■□□□□ 0.5
HMGXB4-206ENST00000466438 NSUN4Q96CB9 384 aaKnown RBP18.18■□□□□ 0.5
HMGXB4-206ENST00000466438 FEZ1Q99689 392 aa18.18■□□□□ 0.5
HMGXB4-206ENST00000466438 TRIM34Q9BYJ4 488 aa18.18■□□□□ 0.5
HMGXB4-206ENST00000466438 USP44Q9H0E7 712 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms