RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 TBC1D12O60347 775 aa14.17□□□□□ -0.14
VPS16-206ENST00000466415 GDF11O95390 407 aa14.17□□□□□ -0.14
VPS16-206ENST00000466415 RXRAP19793 462 aa14.17□□□□□ -0.14
VPS16-206ENST00000466415 GJB2P29033 226 aa14.17□□□□□ -0.14
VPS16-206ENST00000466415 HMGN5P82970 282 aaKnown RBP14.17□□□□□ -0.14
VPS16-206ENST00000466415 ABCB5Q2M3G0 1257 aa14.17□□□□□ -0.14
VPS16-206ENST00000466415 DCAF15Q66K64 600 aa14.17□□□□□ -0.14
VPS16-206ENST00000466415 TATDN1Q6P1N9 297 aa14.17□□□□□ -0.14
VPS16-206ENST00000466415 TMEM179Q6ZVK1 233 aa14.17□□□□□ -0.14
VPS16-206ENST00000466415 FAM184AQ8NB25 1140 aa14.17□□□□□ -0.14
VPS16-206ENST00000466415 CTCFLQ8NI51 663 aaPredicted RBP14.17□□□□□ -0.14
VPS16-206ENST00000466415 CEP95Q96GE4 821 aa14.17□□□□□ -0.14
VPS16-206ENST00000466415 IL17RBQ9NRM6 502 aa14.17□□□□□ -0.14
VPS16-206ENST00000466415 NID2Q14112 1375 aa14.17□□□□□ -0.14
VPS16-206ENST00000466415 PTPDC1A2A3K4 754 aa14.16□□□□□ -0.14
VPS16-206ENST00000466415 SLURP2P0DP57 97 aa14.16□□□□□ -0.14
VPS16-206ENST00000466415 TOP1P11387 765 aaKnown RBP14.16□□□□□ -0.14
VPS16-206ENST00000466415 HIRAP54198 1017 aaPredicted RBP14.16□□□□□ -0.14
VPS16-206ENST00000466415 ATP2B2Q01814 1243 aa14.16□□□□□ -0.14
VPS16-206ENST00000466415 MIGA2Q7L4E1 593 aa14.16□□□□□ -0.14
VPS16-206ENST00000466415 SULF1Q8IWU6 871 aa14.16□□□□□ -0.14
VPS16-206ENST00000466415 PNMA1Q8ND90 353 aa14.16□□□□□ -0.14
VPS16-206ENST00000466415 ANKS1AQ92625 1134 aa14.16□□□□□ -0.14
VPS16-206ENST00000466415 RBM28Q9NW13 759 aaKnown RBP14.16□□□□□ -0.14
VPS16-206ENST00000466415 HPS5Q9UPZ3 1129 aa14.16□□□□□ -0.14
VPS16-206ENST00000466415 TTLL1O95922 423 aa14.15□□□□□ -0.14
VPS16-206ENST00000466415 KIF5BP33176 963 aa14.15□□□□□ -0.14
VPS16-206ENST00000466415 NUCB2P80303 420 aa14.15□□□□□ -0.14
VPS16-206ENST00000466415 ICA1Q05084 483 aa14.15□□□□□ -0.14
VPS16-206ENST00000466415 PPP2R5BQ15173 497 aa14.15□□□□□ -0.14
VPS16-206ENST00000466415 EAPPQ56P03 285 aaPredicted RBP14.15□□□□□ -0.14
VPS16-206ENST00000466415 RCSD1Q6JBY9 416 aa14.15□□□□□ -0.14
VPS16-206ENST00000466415 CDAN1Q8IWY9 1227 aa14.15□□□□□ -0.14
VPS16-206ENST00000466415 TMEM47Q9BQJ4 181 aa14.15□□□□□ -0.14
VPS16-206ENST00000466415 MTMR4Q9NYA4 1195 aa14.15□□□□□ -0.14
VPS16-206ENST00000466415 WDR90Q96KV7 1748 aa14.15□□□□□ -0.14
VPS16-206ENST00000466415 SCN4AP35499 1836 aa14.14□□□□□ -0.15
VPS16-206ENST00000466415 IGKV6D-41A0A0C4DH26 115 aa14.14□□□□□ -0.15
VPS16-206ENST00000466415 JAK2O60674 1132 aa14.14□□□□□ -0.15
VPS16-206ENST00000466415 GH2P01242 217 aa14.14□□□□□ -0.15
VPS16-206ENST00000466415 PDCP20941 246 aa14.14□□□□□ -0.15
VPS16-206ENST00000466415 RAB3GAP1Q15042 981 aa14.14□□□□□ -0.15
VPS16-206ENST00000466415 PNMA8AQ86V59 439 aaPredicted RBP14.14□□□□□ -0.15
VPS16-206ENST00000466415 FANCBQ8NB91 859 aa14.14□□□□□ -0.15
VPS16-206ENST00000466415 NSUN7Q8NE18 718 aaKnown RBP14.14□□□□□ -0.15
VPS16-206ENST00000466415 DDX11Q96FC9 970 aa14.14□□□□□ -0.15
VPS16-206ENST00000466415 TEPSINQ96N21 525 aa14.14□□□□□ -0.15
VPS16-206ENST00000466415 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.14□□□□□ -0.15
VPS16-206ENST00000466415 ZNF341Q9BYN7 854 aa14.14□□□□□ -0.15
VPS16-206ENST00000466415 TAF1DQ9H5J8 278 aaPredicted RBP14.14□□□□□ -0.15
VPS16-206ENST00000466415 KANSL2Q9H9L4 492 aa14.14□□□□□ -0.15
VPS16-206ENST00000466415 CLIP2Q9UDT6 1046 aa14.14□□□□□ -0.15
VPS16-206ENST00000466415 PGAP2Q9UHJ9 254 aa14.14□□□□□ -0.15
VPS16-206ENST00000466415 MTMR7Q9Y216 660 aa14.14□□□□□ -0.15
VPS16-206ENST00000466415 ADD1P35611 737 aaKnown RBP14.13□□□□□ -0.15
VPS16-206ENST00000466415 DDIT3P35638 169 aa14.13□□□□□ -0.15
VPS16-206ENST00000466415 SEPT2Q15019 361 aa14.13□□□□□ -0.15
VPS16-206ENST00000466415 SUPT20HL1Q3ZLR7 823 aa14.13□□□□□ -0.15
VPS16-206ENST00000466415 NBPF12Q5TAG4 269 aaPredicted RBP14.13□□□□□ -0.15
VPS16-206ENST00000466415 CLEC10AQ8IUN9 316 aa14.13□□□□□ -0.15
VPS16-206ENST00000466415 TRIM22Q8IYM9 498 aa14.13□□□□□ -0.15
VPS16-206ENST00000466415 LRRC47Q8N1G4 583 aaKnown RBP14.13□□□□□ -0.15
VPS16-206ENST00000466415 SMARCC2Q8TAQ2 1214 aa14.13□□□□□ -0.15
VPS16-206ENST00000466415 ZC3H15Q8WU90 426 aaKnown RBP14.13□□□□□ -0.15
VPS16-206ENST00000466415 ZBTB21Q9ULJ3 1066 aa14.13□□□□□ -0.15
VPS16-206ENST00000466415 GREB1LQ9C091 1923 aaPredicted RBP14.13□□□□□ -0.15
VPS16-206ENST00000466415 CDC27P30260 824 aa14.12□□□□□ -0.15
VPS16-206ENST00000466415 GNAQP50148 359 aa14.12□□□□□ -0.15
VPS16-206ENST00000466415 AKAP17AQ02040 695 aaKnown RBP14.12□□□□□ -0.15
VPS16-206ENST00000466415 SSRP1Q08945 709 aaKnown RBP14.12□□□□□ -0.15
VPS16-206ENST00000466415 TROAPQ12815 778 aa14.12□□□□□ -0.15
VPS16-206ENST00000466415 KRT26Q7Z3Y9 468 aa14.12□□□□□ -0.15
VPS16-206ENST00000466415 MAP3K14Q99558 947 aa14.12□□□□□ -0.15
VPS16-206ENST00000466415 SLC26A6Q9BXS9 759 aa14.12□□□□□ -0.15
VPS16-206ENST00000466415 ARHGEF10LQ9HCE6 1279 aa14.12□□□□□ -0.15
VPS16-206ENST00000466415 NYAP2Q9P242 653 aa14.12□□□□□ -0.15
VPS16-206ENST00000466415 ORC3Q9UBD5 711 aaPredicted RBP14.12□□□□□ -0.15
VPS16-206ENST00000466415 ISY1Q9ULR0 285 aaKnown RBP14.12□□□□□ -0.15
VPS16-206ENST00000466415 CLEC11AQ9Y240 323 aa14.12□□□□□ -0.15
VPS16-206ENST00000466415 VPS37CA5D8V6 355 aaPredicted RBP14.11□□□□□ -0.15
VPS16-206ENST00000466415 ADM5C9JUS6 153 aa14.11□□□□□ -0.15
VPS16-206ENST00000466415 RAD21O60216 631 aa14.11□□□□□ -0.15
VPS16-206ENST00000466415 DTNBO60941 627 aa14.11□□□□□ -0.15
VPS16-206ENST00000466415 CTDNEP1O95476 244 aa14.11□□□□□ -0.15
VPS16-206ENST00000466415 ASNSP08243 561 aa14.11□□□□□ -0.15
VPS16-206ENST00000466415 PARP1P09874 1014 aaKnown RBP14.11□□□□□ -0.15
VPS16-206ENST00000466415 EEF2P13639 858 aaKnown RBP14.11□□□□□ -0.15
VPS16-206ENST00000466415 PDIA4P13667 645 aaKnown RBP14.11□□□□□ -0.15
VPS16-206ENST00000466415 IFNAR1P17181 557 aa14.11□□□□□ -0.15
VPS16-206ENST00000466415 NF2P35240 595 aa14.11□□□□□ -0.15
VPS16-206ENST00000466415 CAP2P40123 477 aa14.11□□□□□ -0.15
VPS16-206ENST00000466415 NOVP48745 357 aa14.11□□□□□ -0.15
VPS16-206ENST00000466415 MAP3K10Q02779 954 aa14.11□□□□□ -0.15
VPS16-206ENST00000466415 GRM4Q14833 912 aa14.11□□□□□ -0.15
VPS16-206ENST00000466415 SHROOM1Q2M3G4 852 aaPredicted RBP14.11□□□□□ -0.15
VPS16-206ENST00000466415 PRAMEF18Q5VWM3 479 aa14.11□□□□□ -0.15
VPS16-206ENST00000466415 LARP1BQ659C4 914 aaKnown RBP14.11□□□□□ -0.15
VPS16-206ENST00000466415 USP48Q86UV5 1035 aa14.11□□□□□ -0.15
VPS16-206ENST00000466415 WASF1Q92558 559 aa14.11□□□□□ -0.15
VPS16-206ENST00000466415 SH2D4AQ9H788 454 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms