RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 SRCIN1Q9C0H9 1055 aa8.16□□□□□ -1.1
TPM3-214ENST00000466010 OSBPL2Q9H1P3 480 aa8.16□□□□□ -1.1
TPM3-214ENST00000466010 FAM8A1Q9UBU6 413 aa8.16□□□□□ -1.1
TPM3-214ENST00000466010 HRH3Q9Y5N1 445 aa8.16□□□□□ -1.1
TPM3-214ENST00000466010 ABCC4O15439 1325 aa8.15□□□□□ -1.1
TPM3-214ENST00000466010 DDNO94850 711 aaPredicted RBP8.15□□□□□ -1.1
TPM3-214ENST00000466010 CENPCQ03188 943 aa8.15□□□□□ -1.1
TPM3-214ENST00000466010 NEXNQ0ZGT2 675 aa8.15□□□□□ -1.1
TPM3-214ENST00000466010 GRAPQ13588 217 aa8.15□□□□□ -1.1
TPM3-214ENST00000466010 SF3B3Q15393 1217 aaKnown RBP8.15□□□□□ -1.1
TPM3-214ENST00000466010 TAF1CQ15572 869 aaPredicted RBP8.15□□□□□ -1.1
TPM3-214ENST00000466010 SDE2Q6IQ49 451 aa8.15□□□□□ -1.1
TPM3-214ENST00000466010 TMEM214Q6NUQ4 689 aaKnown RBP8.15□□□□□ -1.1
TPM3-214ENST00000466010 PPP1R18Q6NYC8 613 aa8.15□□□□□ -1.1
TPM3-214ENST00000466010 DPP8Q6V1X1 898 aaPredicted RBP8.15□□□□□ -1.1
TPM3-214ENST00000466010 NIM1KQ8IY84 436 aa8.15□□□□□ -1.1
TPM3-214ENST00000466010 GRAPLQ8TC17 118 aaPredicted RBP8.15□□□□□ -1.1
TPM3-214ENST00000466010 ZSCAN10Q96SZ4 725 aaPredicted RBP8.15□□□□□ -1.1
TPM3-214ENST00000466010 RTFDC1Q9BY42 306 aaPredicted RBP8.15□□□□□ -1.1
TPM3-214ENST00000466010 HACL1Q9UJ83 578 aa8.15□□□□□ -1.1
TPM3-214ENST00000466010 FNDC3AQ9Y2H6 1198 aaKnown RBP8.15□□□□□ -1.1
TPM3-214ENST00000466010 SCN4AP35499 1836 aa8.15□□□□□ -1.11
TPM3-214ENST00000466010 CDHR2Q9BYE9 1310 aa8.14□□□□□ -1.11
TPM3-214ENST00000466010 POTECB2RU33 542 aa8.14□□□□□ -1.11
TPM3-214ENST00000466010 MEN1O00255 615 aa8.14□□□□□ -1.11
TPM3-214ENST00000466010 IRS4O14654 1257 aaPredicted RBP8.14□□□□□ -1.11
TPM3-214ENST00000466010 CLSTN1O94985 981 aa8.14□□□□□ -1.11
TPM3-214ENST00000466010 HCLS1P14317 486 aaPredicted RBP8.14□□□□□ -1.11
TPM3-214ENST00000466010 GJA8P48165 433 aa8.14□□□□□ -1.11
TPM3-214ENST00000466010 ST13P50502 369 aaKnown RBP8.14□□□□□ -1.11
TPM3-214ENST00000466010 TWISTNBQ3B726 338 aaPredicted RBP8.14□□□□□ -1.11
TPM3-214ENST00000466010 CCDC152Q4G0S7 254 aa8.14□□□□□ -1.11
TPM3-214ENST00000466010 PLA2G2CQ5R387 149 aa8.14□□□□□ -1.11
TPM3-214ENST00000466010 C8orf58Q8NAV2 365 aa8.14□□□□□ -1.11
TPM3-214ENST00000466010 SNX29Q8TEQ0 813 aa8.14□□□□□ -1.11
TPM3-214ENST00000466010 TAF1DQ9H5J8 278 aaPredicted RBP8.14□□□□□ -1.11
TPM3-214ENST00000466010 MYH16Q9H6N6 1097 aa8.14□□□□□ -1.11
TPM3-214ENST00000466010 SRA1Q9HD15 236 aaKnown RBP8.14□□□□□ -1.11
TPM3-214ENST00000466010 CWC25Q9NXE8 425 aaPredicted RBP8.14□□□□□ -1.11
TPM3-214ENST00000466010 CACNA1SQ13698 1873 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 CCDC88AQ3V6T2 1871 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 TGFBR3LH3BV60 316 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 ELL2O00472 640 aaPredicted RBP8.13□□□□□ -1.11
TPM3-214ENST00000466010 PPIP5K2O43314 1243 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 PCCAP05165 728 aaPredicted RBP8.13□□□□□ -1.11
TPM3-214ENST00000466010 FGRP09769 529 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 EPHX2P34913 555 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 KCNC4Q03721 635 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 KIAA2012Q0VF49 1180 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 TNIP1Q15025 636 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 KSR2Q6VAB6 950 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 MCF2L2Q86YR7 1114 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 CKAP2LQ8IYA6 745 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 DNAJC5GQ8N7S2 189 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 RHPN1Q8TCX5 695 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 RHBDD1Q8TEB9 315 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 CCDC74AQ96AQ1 378 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 KLRG1Q96E93 195 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 FAM89AQ96GI7 184 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 EYA3Q99504 573 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 METTL22Q9BUU2 404 aaPredicted RBP8.13□□□□□ -1.11
TPM3-214ENST00000466010 ZNRF3Q9ULT6 936 aa8.13□□□□□ -1.11
TPM3-214ENST00000466010 ZNF541Q9H0D2 1346 aa8.12□□□□□ -1.11
TPM3-214ENST00000466010 POTEMA6NI47 508 aa8.12□□□□□ -1.11
TPM3-214ENST00000466010 SIAH2O43255 324 aa8.12□□□□□ -1.11
TPM3-214ENST00000466010 PDE8AO60658 829 aa8.12□□□□□ -1.11
TPM3-214ENST00000466010 MICAL2O94851 1124 aa8.12□□□□□ -1.11
TPM3-214ENST00000466010 NR3C2P08235 984 aa8.12□□□□□ -1.11
TPM3-214ENST00000466010 PTGIRP43119 386 aa8.12□□□□□ -1.11
TPM3-214ENST00000466010 RPS8P62241 208 aaKnown RBP8.12□□□□□ -1.11
TPM3-214ENST00000466010 GNASQ5JWF2 1037 aa8.12□□□□□ -1.11
TPM3-214ENST00000466010 LHX8Q68G74 356 aa8.12□□□□□ -1.11
TPM3-214ENST00000466010 OLFM4Q6UX06 510 aa8.12□□□□□ -1.11
TPM3-214ENST00000466010 USP50Q70EL3 339 aaPredicted RBP8.12□□□□□ -1.11
TPM3-214ENST00000466010 ZNF295-AS1Q8N0V1 137 aa8.12□□□□□ -1.11
TPM3-214ENST00000466010 GPRASP2Q96D09 838 aa8.12□□□□□ -1.11
TPM3-214ENST00000466010 FANCIQ9NVI1 1328 aa8.11□□□□□ -1.11
TPM3-214ENST00000466010 PI4KAP2A4QPH2 592 aa8.11□□□□□ -1.11
TPM3-214ENST00000466010 A6NHS1 94 aa8.11□□□□□ -1.11
TPM3-214ENST00000466010 TNFRSF21O75509 655 aa8.11□□□□□ -1.11
TPM3-214ENST00000466010 USP17L7P0C7H9 530 aa8.11□□□□□ -1.11
TPM3-214ENST00000466010 ATF4P18848 351 aaPredicted RBP8.11□□□□□ -1.11
TPM3-214ENST00000466010 PAK2Q13177 524 aa8.11□□□□□ -1.11
TPM3-214ENST00000466010 CCDC184Q52MB2 194 aa8.11□□□□□ -1.11
TPM3-214ENST00000466010 IER5Q5VY09 327 aa8.11□□□□□ -1.11
TPM3-214ENST00000466010 PDE12Q6L8Q7 609 aaKnown RBP8.11□□□□□ -1.11
TPM3-214ENST00000466010 ZNF438Q7Z4V0 828 aa8.11□□□□□ -1.11
TPM3-214ENST00000466010 PI4KAP1Q8N8J0 262 aa8.11□□□□□ -1.11
TPM3-214ENST00000466010 JMYQ8N9B5 988 aa8.11□□□□□ -1.11
TPM3-214ENST00000466010 TSR2Q969E8 191 aaKnown RBP8.11□□□□□ -1.11
TPM3-214ENST00000466010 CDC5LQ99459 802 aaKnown RBP8.11□□□□□ -1.11
TPM3-214ENST00000466010 MYD88Q99836 296 aa8.11□□□□□ -1.11
TPM3-214ENST00000466010 PHAXQ9H814 394 aaKnown RBP8.11□□□□□ -1.11
TPM3-214ENST00000466010 MAP3K2Q9Y2U5 619 aa8.11□□□□□ -1.11
TPM3-214ENST00000466010 GPC6Q9Y625 555 aaPredicted RBP8.11□□□□□ -1.11
TPM3-214ENST00000466010 GJA3Q9Y6H8 435 aa8.11□□□□□ -1.11
TPM3-214ENST00000466010 TCERG1O14776 1098 aaKnown RBP8.1□□□□□ -1.11
TPM3-214ENST00000466010 PHACTR2O75167 634 aa8.1□□□□□ -1.11
TPM3-214ENST00000466010 AOC3Q16853 763 aa8.1□□□□□ -1.11
TPM3-214ENST00000466010 MEI1Q5TIA1 1274 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms