RNA–Protein interactions for RNA: ENST00000465730.1

MMP11-207, Transcript of matrix metallopeptidase 11, humanhuman

TSL 4

Gene MMP11, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-207ENST00000465730 USP17L24Q0WX57 530 aa25.28■■□□□ 1.64
MMP11-207ENST00000465730 UBE2Q1Q7Z7E8 422 aa25.28■■□□□ 1.64
MMP11-207ENST00000465730 KIAA1683Q9H0B3 1180 aa25.28■■□□□ 1.64
MMP11-207ENST00000465730 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.28■■□□□ 1.64
MMP11-207ENST00000465730 BOLA2Q9H3K6 86 aa25.28■■□□□ 1.64
MMP11-207ENST00000465730 TXNRD2Q9NNW7 524 aa25.28■■□□□ 1.64
MMP11-207ENST00000465730 ATP5JP18859 108 aa25.27■■□□□ 1.64
MMP11-207ENST00000465730 SHMT1P34896 483 aa25.27■■□□□ 1.64
MMP11-207ENST00000465730 LRRCC1Q9C099 1032 aa25.27■■□□□ 1.64
MMP11-207ENST00000465730 HMX1Q9NP08 348 aaPredicted RBP25.27■■□□□ 1.64
MMP11-207ENST00000465730 RBPJLQ9UBG7 517 aa25.27■■□□□ 1.64
MMP11-207ENST00000465730 NR2E3Q9Y5X4 410 aa25.27■■□□□ 1.64
MMP11-207ENST00000465730 TCRBV5S4A2TA0A5A2 114 aa25.26■■□□□ 1.63
MMP11-207ENST00000465730 MPHOSPH10O00566 681 aaKnown RBP25.26■■□□□ 1.63
MMP11-207ENST00000465730 CYP2B6P20813 491 aa25.26■■□□□ 1.63
MMP11-207ENST00000465730 LCORLQ8N3X6 602 aa25.26■■□□□ 1.63
MMP11-207ENST00000465730 SDR42E1Q8WUS8 393 aa25.26■■□□□ 1.63
MMP11-207ENST00000465730 EDC3Q96F86 508 aaKnown RBP25.26■■□□□ 1.63
MMP11-207ENST00000465730 RPTORQ8N122 1335 aa25.26■■□□□ 1.63
MMP11-207ENST00000465730 CCNA1P78396 465 aa25.25■■□□□ 1.63
MMP11-207ENST00000465730 AMOTL1Q8IY63 956 aa25.25■■□□□ 1.63
MMP11-207ENST00000465730 TRMT44Q8IYL2 757 aaKnown RBP25.25■■□□□ 1.63
MMP11-207ENST00000465730 DDRGK1Q96HY6 314 aa25.25■■□□□ 1.63
MMP11-207ENST00000465730 HAUS7Q99871 368 aa25.25■■□□□ 1.63
MMP11-207ENST00000465730 DCP1AQ9NPI6 582 aaPredicted RBP25.25■■□□□ 1.63
MMP11-207ENST00000465730 COLQQ9Y215 455 aaPredicted RBP25.25■■□□□ 1.63
MMP11-207ENST00000465730 RABGAP1Q9Y3P9 1069 aa25.25■■□□□ 1.63
MMP11-207ENST00000465730 XRCC5P13010 732 aaKnown RBP25.24■■□□□ 1.63
MMP11-207ENST00000465730 VCAM1P19320 739 aa25.24■■□□□ 1.63
MMP11-207ENST00000465730 ADD2P35612 726 aa25.24■■□□□ 1.63
MMP11-207ENST00000465730 GABPAQ06546 454 aa25.24■■□□□ 1.63
MMP11-207ENST00000465730 ARMT1Q9H993 441 aa25.24■■□□□ 1.63
MMP11-207ENST00000465730 SWAP70Q9UH65 585 aa25.24■■□□□ 1.63
MMP11-207ENST00000465730 PEX10O60683 326 aa25.23■■□□□ 1.63
MMP11-207ENST00000465730 GLRX3O76003 335 aaKnown RBP25.23■■□□□ 1.63
MMP11-207ENST00000465730 MBD4O95243 580 aa25.23■■□□□ 1.63
MMP11-207ENST00000465730 ZSCAN25Q6NSZ9 544 aa25.23■■□□□ 1.63
MMP11-207ENST00000465730 CATSPERGQ6ZRH7 1159 aa25.23■■□□□ 1.63
MMP11-207ENST00000465730 GPR142Q7Z601 462 aa25.23■■□□□ 1.63
MMP11-207ENST00000465730 PLEKHH3Q7Z736 793 aa25.23■■□□□ 1.63
MMP11-207ENST00000465730 ACER1Q8TDN7 264 aa25.23■■□□□ 1.63
MMP11-207ENST00000465730 TRIB2Q92519 343 aa25.23■■□□□ 1.63
MMP11-207ENST00000465730 CRISPLD2Q9H0B8 497 aa25.23■■□□□ 1.63
MMP11-207ENST00000465730 ATP8A2Q9NTI2 1148 aa25.23■■□□□ 1.63
MMP11-207ENST00000465730 CEP290O15078 2479 aa25.23■■□□□ 1.63
MMP11-207ENST00000465730 PLXNB2O15031 1838 aa25.22■■□□□ 1.63
MMP11-207ENST00000465730 ZKSCAN1P17029 563 aaPredicted RBP25.22■■□□□ 1.63
MMP11-207ENST00000465730 RGS2P41220 211 aa25.22■■□□□ 1.63
MMP11-207ENST00000465730 SEPT2Q15019 361 aa25.22■■□□□ 1.63
MMP11-207ENST00000465730 Q3C1V9 767 aa25.22■■□□□ 1.63
MMP11-207ENST00000465730 C20orf194Q5TEA3 1177 aa25.22■■□□□ 1.63
MMP11-207ENST00000465730 ANKLE1Q8NAG6 615 aa25.22■■□□□ 1.63
MMP11-207ENST00000465730 EVI5O60447 810 aa25.21■■□□□ 1.63
MMP11-207ENST00000465730 WDR78Q5VTH9 848 aa25.21■■□□□ 1.63
MMP11-207ENST00000465730 NECAB2Q7Z6G3 386 aa25.21■■□□□ 1.63
MMP11-207ENST00000465730 PORCNQ9H237 461 aa25.21■■□□□ 1.63
MMP11-207ENST00000465730 RPAP3Q9H6T3 665 aaPredicted RBP25.21■■□□□ 1.63
MMP11-207ENST00000465730 TRIM32Q13049 653 aa25.2■■□□□ 1.62
MMP11-207ENST00000465730 UBE3CQ15386 1083 aa25.2■■□□□ 1.62
MMP11-207ENST00000465730 CHRDL2Q6WN34 429 aa25.2■■□□□ 1.62
MMP11-207ENST00000465730 TMEM179Q6ZVK1 233 aa25.2■■□□□ 1.62
MMP11-207ENST00000465730 GPATCH3Q96I76 525 aa25.2■■□□□ 1.62
MMP11-207ENST00000465730 MYH8P13535 1937 aa25.2■■□□□ 1.62
MMP11-207ENST00000465730 PRKAR2AP13861 404 aaKnown RBP25.19■■□□□ 1.62
MMP11-207ENST00000465730 GUCY1A2P33402 732 aa25.19■■□□□ 1.62
MMP11-207ENST00000465730 LBX2Q6XYB7 198 aa25.19■■□□□ 1.62
MMP11-207ENST00000465730 PAWRQ96IZ0 340 aaKnown RBP25.19■■□□□ 1.62
MMP11-207ENST00000465730 APBA2Q99767 749 aa25.19■■□□□ 1.62
MMP11-207ENST00000465730 IVNS1ABPQ9Y6Y0 642 aa25.19■■□□□ 1.62
MMP11-207ENST00000465730 MYH7P12883 1935 aa25.19■■□□□ 1.62
MMP11-207ENST00000465730 CYP2D6P10635 497 aa25.18■■□□□ 1.62
MMP11-207ENST00000465730 SH2D4AQ9H788 454 aa25.18■■□□□ 1.62
MMP11-207ENST00000465730 PRKAB2O43741 272 aa25.17■■□□□ 1.62
MMP11-207ENST00000465730 SMARCA5O60264 1052 aaPredicted RBP25.17■■□□□ 1.62
MMP11-207ENST00000465730 EVX2Q03828 476 aa25.17■■□□□ 1.62
MMP11-207ENST00000465730 MORN1Q5T089 497 aa25.17■■□□□ 1.62
MMP11-207ENST00000465730 SLC44A5Q8NCS7 719 aa25.17■■□□□ 1.62
MMP11-207ENST00000465730 TANGO6Q9C0B7 1094 aa25.17■■□□□ 1.62
MMP11-207ENST00000465730 ARHGEF10LQ9HCE6 1279 aa25.17■■□□□ 1.62
MMP11-207ENST00000465730 ECHDC1Q9NTX5 307 aa25.17■■□□□ 1.62
MMP11-207ENST00000465730 CNMDO75829 334 aa25.16■■□□□ 1.62
MMP11-207ENST00000465730 FXR1P51114 621 aaKnown RBP eCLIP25.16■■□□□ 1.62
MMP11-207ENST00000465730 MAP2K5Q13163 448 aa25.16■■□□□ 1.62
MMP11-207ENST00000465730 SLFNL1Q499Z3 407 aa25.16■■□□□ 1.62
MMP11-207ENST00000465730 MAP3K21Q5TCX8 1036 aa25.16■■□□□ 1.62
MMP11-207ENST00000465730 POTEEQ6S8J3 1075 aa25.16■■□□□ 1.62
MMP11-207ENST00000465730 USP6NLQ92738 828 aa25.16■■□□□ 1.62
MMP11-207ENST00000465730 DYNLL2Q96FJ2 89 aa25.16■■□□□ 1.62
MMP11-207ENST00000465730 CCDC17Q96LX7 622 aa25.16■■□□□ 1.62
MMP11-207ENST00000465730 NBPF3Q9H094 633 aa25.16■■□□□ 1.62
MMP11-207ENST00000465730 HOXC10Q9NYD6 342 aa25.16■■□□□ 1.62
MMP11-207ENST00000465730 SLC4A4Q9Y6R1 1079 aa25.16■■□□□ 1.62
MMP11-207ENST00000465730 BAZ2AQ9UIF9 1905 aaKnown RBP25.16■■□□□ 1.62
MMP11-207ENST00000465730 SPDYE16A6NNV3 312 aaPredicted RBP25.15■■□□□ 1.62
MMP11-207ENST00000465730 ICA1Q05084 483 aa25.15■■□□□ 1.62
MMP11-207ENST00000465730 COG2Q14746 738 aa25.15■■□□□ 1.62
MMP11-207ENST00000465730 A0A1W2PRG0 241 aa25.14■■□□□ 1.62
MMP11-207ENST00000465730 SLC15A5A6NIM6 579 aa25.14■■□□□ 1.62
MMP11-207ENST00000465730 USP17L12C9JPN9 530 aa25.14■■□□□ 1.62
MMP11-207ENST00000465730 USP17L21D6R901 530 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms