RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 USP17L12C9JPN9 530 aa10.42□□□□□ -0.74
UBA3-208ENST00000465627 USP17L21D6R901 530 aa10.42□□□□□ -0.74
UBA3-208ENST00000465627 RAD17O75943 681 aa10.42□□□□□ -0.74
UBA3-208ENST00000465627 NUDT7P0C024 238 aa10.42□□□□□ -0.74
UBA3-208ENST00000465627 TDO2P48775 406 aa10.42□□□□□ -0.74
UBA3-208ENST00000465627 SCNN1DP51172 638 aa10.42□□□□□ -0.74
UBA3-208ENST00000465627 LSM11P83369 360 aaKnown RBP eCLIP10.42□□□□□ -0.74
UBA3-208ENST00000465627 CTDSPL2Q05D32 466 aa10.42□□□□□ -0.74
UBA3-208ENST00000465627 CDC42EP5Q6NZY7 148 aa10.42□□□□□ -0.74
UBA3-208ENST00000465627 FBXO46Q6PJ61 603 aaPredicted RBP10.42□□□□□ -0.74
UBA3-208ENST00000465627 CYB5R4Q7L1T6 521 aa10.42□□□□□ -0.74
UBA3-208ENST00000465627 KIAA0825Q8IV33 1275 aa10.42□□□□□ -0.74
UBA3-208ENST00000465627 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.42□□□□□ -0.74
UBA3-208ENST00000465627 NIM1KQ8IY84 436 aa10.42□□□□□ -0.74
UBA3-208ENST00000465627 MTMR14Q8NCE2 650 aa10.42□□□□□ -0.74
UBA3-208ENST00000465627 AGBL3Q8NEM8 1001 aa10.42□□□□□ -0.74
UBA3-208ENST00000465627 TEKT1Q969V4 418 aa10.42□□□□□ -0.74
UBA3-208ENST00000465627 TCEANC2Q96MN5 208 aa10.42□□□□□ -0.74
UBA3-208ENST00000465627 DDX4Q9NQI0 724 aaKnown RBP10.42□□□□□ -0.74
UBA3-208ENST00000465627 TPCN1Q9ULQ1 816 aa10.42□□□□□ -0.74
UBA3-208ENST00000465627 LIMCH1Q9UPQ0 1083 aa10.42□□□□□ -0.74
UBA3-208ENST00000465627 FLT1P17948 1338 aa10.42□□□□□ -0.74
UBA3-208ENST00000465627 F8W031 263 aaPredicted RBP10.41□□□□□ -0.74
UBA3-208ENST00000465627 ORC4O43929 436 aa10.41□□□□□ -0.74
UBA3-208ENST00000465627 USP17L8P0C7I0 530 aa10.41□□□□□ -0.74
UBA3-208ENST00000465627 CYP2D6P10635 497 aa10.41□□□□□ -0.74
UBA3-208ENST00000465627 PCP11498 1178 aaKnown RBP10.41□□□□□ -0.74
UBA3-208ENST00000465627 PBX2P40425 430 aa10.41□□□□□ -0.74
UBA3-208ENST00000465627 ME3Q16798 604 aa10.41□□□□□ -0.74
UBA3-208ENST00000465627 NCOA7Q8NI08 942 aa10.41□□□□□ -0.74
UBA3-208ENST00000465627 TGFBRAP1Q8WUH2 860 aa10.41□□□□□ -0.74
UBA3-208ENST00000465627 FBXW7Q969H0 707 aa10.41□□□□□ -0.74
UBA3-208ENST00000465627 INTS4Q96HW7 963 aaKnown RBP10.41□□□□□ -0.74
UBA3-208ENST00000465627 IDI2Q9BXS1 227 aa10.41□□□□□ -0.74
UBA3-208ENST00000465627 ZNF408Q9H9D4 720 aa10.41□□□□□ -0.74
UBA3-208ENST00000465627 ARPP21Q9UBL0 812 aaPredicted RBP10.41□□□□□ -0.74
UBA3-208ENST00000465627 HDAC9Q9UKV0 1011 aa10.41□□□□□ -0.74
UBA3-208ENST00000465627 COL2A1P02458 1487 aaPredicted RBP10.41□□□□□ -0.74
UBA3-208ENST00000465627 PRUNE2Q8WUY3 3088 aa10.41□□□□□ -0.74
UBA3-208ENST00000465627 GREB1LQ9C091 1923 aaPredicted RBP10.41□□□□□ -0.74
UBA3-208ENST00000465627 B4E1Z4 1266 aa10.4□□□□□ -0.74
UBA3-208ENST00000465627 MCM5P33992 734 aa10.4□□□□□ -0.74
UBA3-208ENST00000465627 ZNF280AP59817 542 aaPredicted RBP10.4□□□□□ -0.74
UBA3-208ENST00000465627 GABPAQ06546 454 aa10.4□□□□□ -0.74
UBA3-208ENST00000465627 Q6ZUG5 572 aa10.4□□□□□ -0.74
UBA3-208ENST00000465627 TEX11Q8IYF3 940 aa10.4□□□□□ -0.74
UBA3-208ENST00000465627 IGDCC4Q8TDY8 1250 aa10.4□□□□□ -0.74
UBA3-208ENST00000465627 MTA3Q9BTC8 594 aa10.4□□□□□ -0.74
UBA3-208ENST00000465627 GPHNQ9NQX3 736 aaPredicted RBP10.4□□□□□ -0.74
UBA3-208ENST00000465627 ZSWIM5Q9P217 1185 aa10.4□□□□□ -0.74
UBA3-208ENST00000465627 MUC3AQ02505 3323 aa10.4□□□□□ -0.74
UBA3-208ENST00000465627 NID2Q14112 1375 aa10.4□□□□□ -0.75
UBA3-208ENST00000465627 PRC1O43663 620 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 EPS15P42566 896 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 MMP14P50281 582 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 PLCD1P51178 756 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 NFIAQ12857 509 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 ANKRD1Q15327 319 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 MFSD6Q6ZSS7 791 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 MAPKAPK5Q8IW41 473 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 ZNF296Q8WUU4 475 aaPredicted RBP10.39□□□□□ -0.75
UBA3-208ENST00000465627 PRMT6Q96LA8 375 aaPredicted RBP10.39□□□□□ -0.75
UBA3-208ENST00000465627 ZSCAN31Q96LW9 406 aaPredicted RBP10.39□□□□□ -0.75
UBA3-208ENST00000465627 LARP6Q9BRS8 491 aaKnown RBP10.39□□□□□ -0.75
UBA3-208ENST00000465627 NOL10Q9BSC4 688 aaKnown RBP10.39□□□□□ -0.75
UBA3-208ENST00000465627 LRRC2Q9BYS8 371 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 GLIS2Q9BZE0 524 aaPredicted RBP10.39□□□□□ -0.75
UBA3-208ENST00000465627 CNNM2Q9H8M5 875 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 SH2B1Q9NRF2 756 aaPredicted RBP10.39□□□□□ -0.75
UBA3-208ENST00000465627 MCM9Q9NXL9 1143 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 FAM198AQ9UFP1 575 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 PCDHGA4Q9Y5G9 962 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 ATRNL1Q5VV63 1379 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 MINDY4BA8MYZ0 360 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 SH2B2O14492 632 aaPredicted RBP10.39□□□□□ -0.75
UBA3-208ENST00000465627 RPS12P25398 132 aaKnown RBP10.39□□□□□ -0.75
UBA3-208ENST00000465627 USP5P45974 858 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 NT5C2P49902 561 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 SEC23AQ15436 765 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 CFAP100Q494V2 611 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 C16orf86Q6ZW13 317 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 Q7L0L9 218 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 CHST3Q7LGC8 479 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 SGMS1Q86VZ5 419 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 METTL16Q86W50 562 aaKnown RBP10.39□□□□□ -0.75
UBA3-208ENST00000465627 JDP2Q8WYK2 163 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 DPF2Q92785 391 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 BRF1Q92994 677 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 TMEM87BQ96K49 555 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 KRT23Q9C075 422 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 OSBPL5Q9H0X9 879 aaPredicted RBP10.39□□□□□ -0.75
UBA3-208ENST00000465627 PRO3102Q9H379 93 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 RNF41Q9H4P4 317 aaPredicted RBP10.39□□□□□ -0.75
UBA3-208ENST00000465627 LY9Q9HBG7 655 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 SENP2Q9HC62 589 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 USP40Q9NVE5 1235 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 PGAP2Q9UHJ9 254 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 BRPF3Q9ULD4 1205 aa10.39□□□□□ -0.75
UBA3-208ENST00000465627 SHTN1A0MZ66 631 aa10.38□□□□□ -0.75
UBA3-208ENST00000465627 PFKFB2O60825 505 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms