RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 KIF1BPQ96EK5 621 aa27.64■■■□□ 2.02
USP42-205ENST00000465073 PAGR1Q9BTK6 254 aa27.64■■■□□ 2.02
USP42-205ENST00000465073 CABP5Q9NP86 173 aa27.64■■■□□ 2.02
USP42-205ENST00000465073 RABGAP1Q9Y3P9 1069 aa27.64■■■□□ 2.02
USP42-205ENST00000465073 MYH1P12882 1939 aa27.64■■■□□ 2.02
USP42-205ENST00000465073 PLCD1P51178 756 aa27.64■■■□□ 2.01
USP42-205ENST00000465073 ZYXQ15942 572 aaKnown RBP27.64■■■□□ 2.01
USP42-205ENST00000465073 POTEEQ6S8J3 1075 aa27.64■■■□□ 2.01
USP42-205ENST00000465073 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.64■■■□□ 2.01
USP42-205ENST00000465073 USP6NLQ92738 828 aa27.64■■■□□ 2.01
USP42-205ENST00000465073 PORCNQ9H237 461 aa27.64■■■□□ 2.01
USP42-205ENST00000465073 RANBP2P49792 3224 aaKnown RBP27.63■■■□□ 2.01
USP42-205ENST00000465073 HMMRO75330 724 aa27.63■■■□□ 2.01
USP42-205ENST00000465073 POLR3DP05423 398 aaPredicted RBP27.63■■■□□ 2.01
USP42-205ENST00000465073 PDE6AP16499 860 aa27.63■■■□□ 2.01
USP42-205ENST00000465073 GPR142Q7Z601 462 aa27.63■■■□□ 2.01
USP42-205ENST00000465073 PLEKHH3Q7Z736 793 aa27.63■■■□□ 2.01
USP42-205ENST00000465073 CRNKL1Q9BZJ0 848 aaKnown RBP27.63■■■□□ 2.01
USP42-205ENST00000465073 NBPF3Q9H094 633 aa27.63■■■□□ 2.01
USP42-205ENST00000465073 PRKAR2AP13861 404 aaKnown RBP27.62■■■□□ 2.01
USP42-205ENST00000465073 SHMT1P34896 483 aa27.62■■■□□ 2.01
USP42-205ENST00000465073 RGS2P41220 211 aa27.62■■■□□ 2.01
USP42-205ENST00000465073 MORN1Q5T089 497 aa27.62■■■□□ 2.01
USP42-205ENST00000465073 OGDHLQ9ULD0 1010 aa27.62■■■□□ 2.01
USP42-205ENST00000465073 PLXNB2O15031 1838 aa27.62■■■□□ 2.01
USP42-205ENST00000465073 IFIT2P09913 472 aaKnown RBP27.61■■■□□ 2.01
USP42-205ENST00000465073 ZKSCAN1P17029 563 aaPredicted RBP27.61■■■□□ 2.01
USP42-205ENST00000465073 CCNA1P78396 465 aa27.61■■■□□ 2.01
USP42-205ENST00000465073 CATSPERGQ6ZRH7 1159 aa27.61■■■□□ 2.01
USP42-205ENST00000465073 DDX19BQ9UMR2 479 aa27.61■■■□□ 2.01
USP42-205ENST00000465073 APBB1O00213 710 aa27.6■■■□□ 2.01
USP42-205ENST00000465073 ACER1Q8TDN7 264 aa27.6■■■□□ 2.01
USP42-205ENST00000465073 ZBTB40Q9NUA8 1239 aa27.6■■■□□ 2.01
USP42-205ENST00000465073 A0A1W2PPC1 479 aa27.59■■■□□ 2.01
USP42-205ENST00000465073 GOLIM4O00461 696 aa27.59■■■□□ 2.01
USP42-205ENST00000465073 RAB11FIP3O75154 756 aa27.59■■■□□ 2.01
USP42-205ENST00000465073 GLRX3O76003 335 aaKnown RBP27.59■■■□□ 2.01
USP42-205ENST00000465073 VCAM1P19320 739 aa27.59■■■□□ 2.01
USP42-205ENST00000465073 MNX1P50219 401 aaPredicted RBP27.59■■■□□ 2.01
USP42-205ENST00000465073 GABPAQ06546 454 aa27.59■■■□□ 2.01
USP42-205ENST00000465073 DNAJC2Q99543 621 aaKnown RBP27.59■■■□□ 2.01
USP42-205ENST00000465073 CWC22Q9HCG8 908 aaKnown RBP27.59■■■□□ 2.01
USP42-205ENST00000465073 ZNF532Q9HCE3 1301 aa27.59■■■□□ 2.01
USP42-205ENST00000465073 CACNB2Q08289 660 aaPredicted RBP27.58■■■□□ 2.01
USP42-205ENST00000465073 SIRT2Q8IXJ6 389 aa27.58■■■□□ 2.01
USP42-205ENST00000465073 APBA2Q99767 749 aa27.58■■■□□ 2.01
USP42-205ENST00000465073 MCM9Q9NXL9 1143 aa27.58■■■□□ 2.01
USP42-205ENST00000465073 CNMDO75829 334 aa27.57■■■□□ 2
USP42-205ENST00000465073 GUCY1A2P33402 732 aa27.57■■■□□ 2
USP42-205ENST00000465073 LBX2Q6XYB7 198 aa27.57■■■□□ 2
USP42-205ENST00000465073 CHMP4BQ9H444 224 aaKnown RBP27.57■■■□□ 2
USP42-205ENST00000465073 C11orf49Q9H6J7 331 aa27.57■■■□□ 2
USP42-205ENST00000465073 TCRBV5S4A2TA0A5A2 114 aa27.57■■■□□ 2
USP42-205ENST00000465073 COG6Q9Y2V7 657 aa27.57■■■□□ 2
USP42-205ENST00000465073 MAP2K5Q13163 448 aa27.56■■■□□ 2
USP42-205ENST00000465073 SEPT2Q15019 361 aa27.56■■■□□ 2
USP42-205ENST00000465073 CCL14Q16627 93 aa27.56■■■□□ 2
USP42-205ENST00000465073 RPAP3Q9H6T3 665 aaPredicted RBP27.56■■■□□ 2
USP42-205ENST00000465073 STAP2Q9UGK3 403 aa27.56■■■□□ 2
USP42-205ENST00000465073 C7orf61Q8IZ16 206 aa27.55■■■□□ 2
USP42-205ENST00000465073 EDC3Q96F86 508 aaKnown RBP27.55■■■□□ 2
USP42-205ENST00000465073 DCP1AQ9NPI6 582 aaPredicted RBP27.55■■■□□ 2
USP42-205ENST00000465073 SLC15A5A6NIM6 579 aa27.54■■■□□ 2
USP42-205ENST00000465073 LCORLQ8N3X6 602 aa27.54■■■□□ 2
USP42-205ENST00000465073 SDR42E1Q8WUS8 393 aa27.54■■■□□ 2
USP42-205ENST00000465073 MPHOSPH10O00566 681 aaKnown RBP27.53■■■□□ 2
USP42-205ENST00000465073 PTPREP23469 700 aa27.53■■■□□ 2
USP42-205ENST00000465073 BCL11AQ9H165 835 aa27.53■■■□□ 2
USP42-205ENST00000465073 PAG1Q9NWQ8 432 aa27.53■■■□□ 2
USP42-205ENST00000465073 BTBD7Q9P203 1132 aa27.53■■■□□ 2
USP42-205ENST00000465073 SPDYE16A6NNV3 312 aaPredicted RBP27.52■■■□□ 2
USP42-205ENST00000465073 ATP5JP18859 108 aa27.52■■■□□ 2
USP42-205ENST00000465073 WDR78Q5VTH9 848 aa27.52■■■□□ 2
USP42-205ENST00000465073 IVNS1ABPQ9Y6Y0 642 aa27.52■■■□□ 2
USP42-205ENST00000465073 DDX60LQ5H9U9 1706 aaKnown RBP27.52■■■□□ 2
USP42-205ENST00000465073 CCND3P30281 292 aaPredicted RBP27.51■■■□□ 2
USP42-205ENST00000465073 EVX2Q03828 476 aa27.51■■■□□ 2
USP42-205ENST00000465073 MFSD14CQ5VZR4 134 aa27.51■■■□□ 2
USP42-205ENST00000465073 LHX8Q68G74 356 aa27.51■■■□□ 2
USP42-205ENST00000465073 HOXC10Q9NYD6 342 aa27.51■■■□□ 2
USP42-205ENST00000465073 SWAP70Q9UH65 585 aa27.51■■■□□ 2
USP42-205ENST00000465073 A0A1W2PRG0 241 aa27.51■■□□□ 1.99
USP42-205ENST00000465073 BMP8BP34820 402 aa27.51■■□□□ 1.99
USP42-205ENST00000465073 COG2Q14746 738 aa27.51■■□□□ 1.99
USP42-205ENST00000465073 TMEM179Q6ZVK1 233 aa27.51■■□□□ 1.99
USP42-205ENST00000465073 GDF15Q99988 308 aa27.51■■□□□ 1.99
USP42-205ENST00000465073 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.51■■□□□ 1.99
USP42-205ENST00000465073 BOLA2Q9H3K6 86 aa27.51■■□□□ 1.99
USP42-205ENST00000465073 ARMT1Q9H993 441 aa27.51■■□□□ 1.99
USP42-205ENST00000465073 ATP8A2Q9NTI2 1148 aa27.51■■□□□ 1.99
USP42-205ENST00000465073 ZMYND8Q9ULU4 1186 aaPredicted RBP27.51■■□□□ 1.99
USP42-205ENST00000465073 HOXC6P09630 235 aa27.5■■□□□ 1.99
USP42-205ENST00000465073 CYP2D6P10635 497 aa27.5■■□□□ 1.99
USP42-205ENST00000465073 ADD2P35612 726 aa27.5■■□□□ 1.99
USP42-205ENST00000465073 ALPK3Q96L96 1907 aa27.49■■□□□ 1.99
USP42-205ENST00000465073 NAV1Q8NEY1 1877 aa27.49■■□□□ 1.99
USP42-205ENST00000465073 COL6A1P12109 1028 aa27.49■■□□□ 1.99
USP42-205ENST00000465073 GRB14Q14449 540 aa27.49■■□□□ 1.99
USP42-205ENST00000465073 HAUS7Q99871 368 aa27.49■■□□□ 1.99
USP42-205ENST00000465073 PFASO15067 1338 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms