RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 SLC30A3Q99726 388 aa7.12□□□□□ -1.27
CMTM1-207ENST00000465057 ZNF277Q9NRM2 450 aaPredicted RBP7.12□□□□□ -1.27
CMTM1-207ENST00000465057 TRPM7Q96QT4 1865 aa7.11□□□□□ -1.27
CMTM1-207ENST00000465057 KLRG2A4D1S0 409 aaPredicted RBP7.11□□□□□ -1.27
CMTM1-207ENST00000465057 ANXA1P04083 346 aa7.11□□□□□ -1.27
CMTM1-207ENST00000465057 FKBP4Q02790 459 aaKnown RBP eCLIP7.11□□□□□ -1.27
CMTM1-207ENST00000465057 SOGA3Q5TF21 947 aa7.11□□□□□ -1.27
CMTM1-207ENST00000465057 IER5Q5VY09 327 aa7.11□□□□□ -1.27
CMTM1-207ENST00000465057 LINC00114Q6XXX2 140 aa7.11□□□□□ -1.27
CMTM1-207ENST00000465057 KIF6Q6ZMV9 814 aa7.11□□□□□ -1.27
CMTM1-207ENST00000465057 BTLAQ7Z6A9 289 aa7.11□□□□□ -1.27
CMTM1-207ENST00000465057 JMYQ8N9B5 988 aa7.11□□□□□ -1.27
CMTM1-207ENST00000465057 TSPYL4Q9UJ04 414 aa7.11□□□□□ -1.27
CMTM1-207ENST00000465057 KCNH4Q9UQ05 1017 aa7.11□□□□□ -1.27
CMTM1-207ENST00000465057 RIC1Q4ADV7 1423 aa7.1□□□□□ -1.27
CMTM1-207ENST00000465057 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.1□□□□□ -1.27
CMTM1-207ENST00000465057 SIN3BO75182 1162 aa7.1□□□□□ -1.27
CMTM1-207ENST00000465057 ATG7O95352 703 aa7.1□□□□□ -1.27
CMTM1-207ENST00000465057 EIF2S2P20042 333 aaKnown RBP7.1□□□□□ -1.27
CMTM1-207ENST00000465057 SPEM2Q0P670 501 aa7.1□□□□□ -1.27
CMTM1-207ENST00000465057 LMOD3Q0VAK6 560 aa7.1□□□□□ -1.27
CMTM1-207ENST00000465057 SWI5Q1ZZU3 235 aa7.1□□□□□ -1.27
CMTM1-207ENST00000465057 PROSER3Q2NL68 480 aa7.1□□□□□ -1.27
CMTM1-207ENST00000465057 COL13A1Q5TAT6 717 aaPredicted RBP7.1□□□□□ -1.27
CMTM1-207ENST00000465057 SUSD4Q5VX71 490 aa7.1□□□□□ -1.27
CMTM1-207ENST00000465057 CHSY3Q70JA7 882 aa7.1□□□□□ -1.27
CMTM1-207ENST00000465057 CCDC146Q8IYE0 955 aa7.1□□□□□ -1.27
CMTM1-207ENST00000465057 FAM9BQ8IZU0 186 aa7.1□□□□□ -1.27
CMTM1-207ENST00000465057 MDFIQ99750 246 aa7.1□□□□□ -1.27
CMTM1-207ENST00000465057 NYXQ9GZU5 481 aa7.1□□□□□ -1.27
CMTM1-207ENST00000465057 ZMIZ1Q9ULJ6 1067 aa7.1□□□□□ -1.27
CMTM1-207ENST00000465057 LAS1LQ9Y4W2 734 aaKnown RBP7.1□□□□□ -1.27
CMTM1-207ENST00000465057 LRRC37AA6NMS7 1700 aa7.1□□□□□ -1.27
CMTM1-207ENST00000465057 COL4A1P02462 1669 aa7.09□□□□□ -1.27
CMTM1-207ENST00000465057 IBTKQ9P2D0 1353 aaPredicted RBP7.09□□□□□ -1.27
CMTM1-207ENST00000465057 RNF123Q5XPI4 1314 aa7.09□□□□□ -1.27
CMTM1-207ENST00000465057 SPEF2Q9C093 1822 aa7.09□□□□□ -1.27
CMTM1-207ENST00000465057 ELOA3CA0A087WX78 387 aaPredicted RBP7.09□□□□□ -1.27
CMTM1-207ENST00000465057 ELOA3DA6NLF2 546 aaPredicted RBP7.09□□□□□ -1.27
CMTM1-207ENST00000465057 ERVV-1B6SEH8 477 aa7.09□□□□□ -1.27
CMTM1-207ENST00000465057 TGFBR3LH3BV60 316 aa7.09□□□□□ -1.27
CMTM1-207ENST00000465057 NTSR2O95665 410 aa7.09□□□□□ -1.27
CMTM1-207ENST00000465057 HSPA1AP0DMV8 641 aaKnown RBP7.09□□□□□ -1.27
CMTM1-207ENST00000465057 HSPA1BP0DMV9 641 aaKnown RBP7.09□□□□□ -1.27
CMTM1-207ENST00000465057 IARSP41252 1262 aaKnown RBP7.09□□□□□ -1.27
CMTM1-207ENST00000465057 DGKGP49619 791 aa7.09□□□□□ -1.27
CMTM1-207ENST00000465057 RIPK4P57078 832 aa7.09□□□□□ -1.27
CMTM1-207ENST00000465057 KRT24Q2M2I5 525 aa7.09□□□□□ -1.27
CMTM1-207ENST00000465057 ELOA3BQ3SY89 546 aa7.09□□□□□ -1.27
CMTM1-207ENST00000465057 CRY2Q49AN0 593 aa7.09□□□□□ -1.27
CMTM1-207ENST00000465057 EAPPQ56P03 285 aaPredicted RBP7.09□□□□□ -1.27
CMTM1-207ENST00000465057 LRP10Q7Z4F1 713 aa7.09□□□□□ -1.27
CMTM1-207ENST00000465057 HOMEZQ8IX15 550 aa7.09□□□□□ -1.27
CMTM1-207ENST00000465057 SYNE4Q8N205 404 aa7.09□□□□□ -1.27
CMTM1-207ENST00000465057 ELOA3Q8NG57 546 aa7.09□□□□□ -1.27
CMTM1-207ENST00000465057 RPGRQ92834 1020 aaKnown RBP7.09□□□□□ -1.27
CMTM1-207ENST00000465057 ZNF428Q96B54 188 aa7.09□□□□□ -1.27
CMTM1-207ENST00000465057 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.09□□□□□ -1.27
CMTM1-207ENST00000465057 DMGDHQ9UI17 866 aaKnown RBP7.09□□□□□ -1.27
CMTM1-207ENST00000465057 ADARB2-AS1A8MUL3 147 aa7.08□□□□□ -1.28
CMTM1-207ENST00000465057 ALDH1B1P30837 517 aa7.08□□□□□ -1.28
CMTM1-207ENST00000465057 TMPOP42166 694 aaKnown RBP7.08□□□□□ -1.28
CMTM1-207ENST00000465057 ZNF34Q8IZ26 560 aa7.08□□□□□ -1.28
CMTM1-207ENST00000465057 RTKN2Q8IZC4 609 aa7.08□□□□□ -1.28
CMTM1-207ENST00000465057 TNFRSF25Q93038 417 aa7.08□□□□□ -1.28
CMTM1-207ENST00000465057 VTI1AQ96AJ9 217 aa7.08□□□□□ -1.28
CMTM1-207ENST00000465057 MYO19Q96H55 970 aa7.08□□□□□ -1.28
CMTM1-207ENST00000465057 TAF1DQ9H5J8 278 aaPredicted RBP7.08□□□□□ -1.28
CMTM1-207ENST00000465057 DUOX1Q9NRD9 1551 aa7.08□□□□□ -1.28
CMTM1-207ENST00000465057 PASKQ96RG2 1323 aa7.07□□□□□ -1.28
CMTM1-207ENST00000465057 MYBBP1AQ9BQG0 1328 aaKnown RBP7.07□□□□□ -1.28
CMTM1-207ENST00000465057 IQCA1LA6NCM1 817 aa7.07□□□□□ -1.28
CMTM1-207ENST00000465057 FZD9O00144 591 aa7.07□□□□□ -1.28
CMTM1-207ENST00000465057 PIK3R2O00459 728 aa7.07□□□□□ -1.28
CMTM1-207ENST00000465057 HSP90AA1P07900 732 aaKnown RBP7.07□□□□□ -1.28
CMTM1-207ENST00000465057 ALAS2P22557 587 aa7.07□□□□□ -1.28
CMTM1-207ENST00000465057 EPHX2P34913 555 aa7.07□□□□□ -1.28
CMTM1-207ENST00000465057 AIMP1Q12904 312 aaKnown RBP7.07□□□□□ -1.28
CMTM1-207ENST00000465057 LDHDQ86WU2 507 aa7.07□□□□□ -1.28
CMTM1-207ENST00000465057 STK32AQ8WU08 396 aa7.07□□□□□ -1.28
CMTM1-207ENST00000465057 PBXIP1Q96AQ6 731 aa7.07□□□□□ -1.28
CMTM1-207ENST00000465057 PRIMPOLQ96LW4 560 aa7.07□□□□□ -1.28
CMTM1-207ENST00000465057 PSMD1Q99460 953 aa7.07□□□□□ -1.28
CMTM1-207ENST00000465057 KLK14Q9P0G3 267 aa7.07□□□□□ -1.28
CMTM1-207ENST00000465057 HACL1Q9UJ83 578 aa7.07□□□□□ -1.28
CMTM1-207ENST00000465057 ABCC4O15439 1325 aa7.06□□□□□ -1.28
CMTM1-207ENST00000465057 THSD7BQ9C0I4 1608 aa7.06□□□□□ -1.28
CMTM1-207ENST00000465057 MYH3P11055 1940 aa7.06□□□□□ -1.28
CMTM1-207ENST00000465057 GNB5O14775 395 aa7.06□□□□□ -1.28
CMTM1-207ENST00000465057 HOXB7P09629 217 aa7.06□□□□□ -1.28
CMTM1-207ENST00000465057 CALD1Q05682 793 aaKnown RBP7.06□□□□□ -1.28
CMTM1-207ENST00000465057 FKBP5Q13451 457 aaPredicted RBP7.06□□□□□ -1.28
CMTM1-207ENST00000465057 DGKZQ13574 1117 aa7.06□□□□□ -1.28
CMTM1-207ENST00000465057 OCLNQ16625 522 aa7.06□□□□□ -1.28
CMTM1-207ENST00000465057 C11orf91Q3C1V1 193 aa7.06□□□□□ -1.28
CMTM1-207ENST00000465057 MAP1SQ66K74 1059 aaPredicted RBP7.06□□□□□ -1.28
CMTM1-207ENST00000465057 COPS6Q7L5N1 327 aa7.06□□□□□ -1.28
CMTM1-207ENST00000465057 PPP1R42Q7Z4L9 355 aa7.06□□□□□ -1.28
CMTM1-207ENST00000465057 RAB44Q7Z6P3 723 aaPredicted RBP7.06□□□□□ -1.28
CMTM1-207ENST00000465057 ALYREFQ86V81 257 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms