RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 CCDC84Q86UT8 332 aaPredicted RBP8.14□□□□□ -1.11
UBR4-209ENST00000465036 AMIGO3Q86WK7 504 aa8.14□□□□□ -1.11
UBR4-209ENST00000465036 XAGE3Q8WTP9 111 aa8.14□□□□□ -1.11
UBR4-209ENST00000465036 DUSP15Q9H1R2 295 aaPredicted RBP8.14□□□□□ -1.11
UBR4-209ENST00000465036 TRIT1Q9H3H1 467 aaKnown RBP8.14□□□□□ -1.11
UBR4-209ENST00000465036 NSUN3Q9H649 340 aaKnown RBP8.14□□□□□ -1.11
UBR4-209ENST00000465036 CEP131Q9UPN4 1083 aa8.14□□□□□ -1.11
UBR4-209ENST00000465036 MED14OSP0DP75 135 aa8.13□□□□□ -1.11
UBR4-209ENST00000465036 SRFP11831 508 aa8.13□□□□□ -1.11
UBR4-209ENST00000465036 Q96M66 194 aa8.13□□□□□ -1.11
UBR4-209ENST00000465036 NOC4LQ9BVI4 516 aaKnown RBP8.13□□□□□ -1.11
UBR4-209ENST00000465036 GPR62Q9BZJ7 368 aa8.13□□□□□ -1.11
UBR4-209ENST00000465036 DNAJC25-GNG10A0A024R161 153 aa8.12□□□□□ -1.11
UBR4-209ENST00000465036 TFE3P19532 575 aaPredicted RBP8.12□□□□□ -1.11
UBR4-209ENST00000465036 RALGPS1Q5JS13 557 aa8.12□□□□□ -1.11
UBR4-209ENST00000465036 LCNL1Q6ZST4 164 aa8.12□□□□□ -1.11
UBR4-209ENST00000465036 MYLIPQ8WY64 445 aa8.12□□□□□ -1.11
UBR4-209ENST00000465036 EPB41L4BQ9H329 900 aa8.12□□□□□ -1.11
UBR4-209ENST00000465036 RAPGEFL1Q9UHV5 662 aa8.12□□□□□ -1.11
UBR4-209ENST00000465036 ST13P50502 369 aaKnown RBP8.11□□□□□ -1.11
UBR4-209ENST00000465036 DIEXFQ68CQ4 756 aaKnown RBP8.11□□□□□ -1.11
UBR4-209ENST00000465036 PPP1R13LQ8WUF5 828 aa8.11□□□□□ -1.11
UBR4-209ENST00000465036 ACSF2Q96CM8 615 aaPredicted RBP8.11□□□□□ -1.11
UBR4-209ENST00000465036 DIRC2Q96SL1 478 aa8.11□□□□□ -1.11
UBR4-209ENST00000465036 CD320Q9NPF0 282 aa8.11□□□□□ -1.11
UBR4-209ENST00000465036 DCP1AQ9NPI6 582 aaPredicted RBP8.11□□□□□ -1.11
UBR4-209ENST00000465036 TMEM253P0C7T8 217 aa8.1□□□□□ -1.11
UBR4-209ENST00000465036 GLDCP23378 1020 aa8.1□□□□□ -1.11
UBR4-209ENST00000465036 TMEM201Q5SNT2 666 aa8.1□□□□□ -1.11
UBR4-209ENST00000465036 SLC26A8Q96RN1 970 aa8.1□□□□□ -1.11
UBR4-209ENST00000465036 DUSP9Q99956 384 aaKnown RBP8.1□□□□□ -1.11
UBR4-209ENST00000465036 DPH2Q9BQC3 489 aaPredicted RBP8.1□□□□□ -1.11
UBR4-209ENST00000465036 GPATCH2Q9NW75 528 aa8.1□□□□□ -1.11
UBR4-209ENST00000465036 ZSCAN22P10073 491 aaPredicted RBP8.09□□□□□ -1.11
UBR4-209ENST00000465036 TPP2P29144 1249 aaPredicted RBP8.09□□□□□ -1.11
UBR4-209ENST00000465036 CREG2Q8IUH2 290 aa8.09□□□□□ -1.11
UBR4-209ENST00000465036 LILRA2Q8N149 483 aa8.09□□□□□ -1.11
UBR4-209ENST00000465036 PDZD8Q8NEN9 1154 aa8.09□□□□□ -1.11
UBR4-209ENST00000465036 CYB5D2Q8WUJ1 264 aa8.09□□□□□ -1.11
UBR4-209ENST00000465036 ADAMTS10Q9H324 1103 aa8.09□□□□□ -1.11
UBR4-209ENST00000465036 SP110Q9HB58 689 aa8.09□□□□□ -1.11
UBR4-209ENST00000465036 KCNH3Q9ULD8 1083 aa8.09□□□□□ -1.11
UBR4-209ENST00000465036 KRTAP9-7A8MTY7 169 aa8.08□□□□□ -1.12
UBR4-209ENST00000465036 TSPYL5Q86VY4 417 aaPredicted RBP8.08□□□□□ -1.12
UBR4-209ENST00000465036 PHC3Q8NDX5 983 aa8.08□□□□□ -1.12
UBR4-209ENST00000465036 TRAIPQ9BWF2 469 aa8.08□□□□□ -1.12
UBR4-209ENST00000465036 HK2P52789 917 aa8.07□□□□□ -1.12
UBR4-209ENST00000465036 ERVFC1P60507 584 aa8.07□□□□□ -1.12
UBR4-209ENST00000465036 NR0B2Q15466 257 aa8.07□□□□□ -1.12
UBR4-209ENST00000465036 TAF1CQ15572 869 aaPredicted RBP8.07□□□□□ -1.12
UBR4-209ENST00000465036 MAP3K11Q16584 847 aa8.07□□□□□ -1.12
UBR4-209ENST00000465036 EAPPQ56P03 285 aaPredicted RBP8.07□□□□□ -1.12
UBR4-209ENST00000465036 SLFN12Q8IYM2 578 aa8.07□□□□□ -1.12
UBR4-209ENST00000465036 DTWD2Q8NBA8 298 aa8.07□□□□□ -1.12
UBR4-209ENST00000465036 USP31Q70CQ4 1352 aa8.07□□□□□ -1.12
UBR4-209ENST00000465036 PRR36Q9H6K5 1346 aa8.06□□□□□ -1.12
UBR4-209ENST00000465036 ZGLP1P0C6A0 271 aa8.06□□□□□ -1.12
UBR4-209ENST00000465036 YARSP54577 528 aaKnown RBP8.06□□□□□ -1.12
UBR4-209ENST00000465036 KCNA10Q16322 511 aa8.06□□□□□ -1.12
UBR4-209ENST00000465036 MEI1Q5TIA1 1274 aa8.06□□□□□ -1.12
UBR4-209ENST00000465036 ATG14Q6ZNE5 492 aa8.06□□□□□ -1.12
UBR4-209ENST00000465036 IRF2BP1Q8IU81 584 aa8.06□□□□□ -1.12
UBR4-209ENST00000465036 OXR1Q8N573 874 aa8.06□□□□□ -1.12
UBR4-209ENST00000465036 RNF141Q8WVD5 230 aa8.06□□□□□ -1.12
UBR4-209ENST00000465036 KRTAP4-2Q9BYR5 136 aa8.06□□□□□ -1.12
UBR4-209ENST00000465036 DUSP13Q9UII6 198 aa8.06□□□□□ -1.12
UBR4-209ENST00000465036 WASH4PA8MWX3 477 aa8.05□□□□□ -1.12
UBR4-209ENST00000465036 NPIPB6E9PJ23 425 aa8.05□□□□□ -1.12
UBR4-209ENST00000465036 CILPO75339 1184 aa8.05□□□□□ -1.12
UBR4-209ENST00000465036 DAB2P98082 770 aa8.05□□□□□ -1.12
UBR4-209ENST00000465036 TTLL10Q6ZVT0 673 aa8.05□□□□□ -1.12
UBR4-209ENST00000465036 DHX38Q92620 1227 aaKnown RBP8.05□□□□□ -1.12
UBR4-209ENST00000465036 FAM221AA4D161 298 aa8.04□□□□□ -1.12
UBR4-209ENST00000465036 FITM1A5D6W6 292 aa8.04□□□□□ -1.12
UBR4-209ENST00000465036 TCAF2A6NFQ2 919 aa8.04□□□□□ -1.12
UBR4-209ENST00000465036 ETV2O00321 342 aaPredicted RBP8.04□□□□□ -1.12
UBR4-209ENST00000465036 PLCG1P19174 1290 aa8.04□□□□□ -1.12
UBR4-209ENST00000465036 LMNB2Q03252 620 aa8.04□□□□□ -1.12
UBR4-209ENST00000465036 EGR3Q06889 387 aa8.04□□□□□ -1.12
UBR4-209ENST00000465036 JARID2Q92833 1246 aaPredicted RBP8.04□□□□□ -1.12
UBR4-209ENST00000465036 CWC22Q9HCG8 908 aaKnown RBP8.04□□□□□ -1.12
UBR4-209ENST00000465036 RNF19AQ9NV58 838 aa8.04□□□□□ -1.12
UBR4-209ENST00000465036 TLR6Q9Y2C9 796 aa8.04□□□□□ -1.12
UBR4-209ENST00000465036 ANKRD33BA6NCL7 494 aa8.03□□□□□ -1.12
UBR4-209ENST00000465036 RBAK-RBAKDNI3L0D1 243 aa8.03□□□□□ -1.12
UBR4-209ENST00000465036 SNX17Q15036 470 aa8.03□□□□□ -1.12
UBR4-209ENST00000465036 CIAPIN1Q6FI81 312 aa8.03□□□□□ -1.12
UBR4-209ENST00000465036 LILRA6Q6PI73 481 aa8.03□□□□□ -1.12
UBR4-209ENST00000465036 FAM13CQ8NE31 585 aa8.03□□□□□ -1.12
UBR4-209ENST00000465036 GATAD2BQ8WXI9 593 aa8.03□□□□□ -1.12
UBR4-209ENST00000465036 KCNN1Q92952 543 aa8.03□□□□□ -1.12
UBR4-209ENST00000465036 RNF32Q9H0A6 362 aa8.03□□□□□ -1.12
UBR4-209ENST00000465036 SLC6A17Q9H1V8 727 aa8.03□□□□□ -1.12
UBR4-209ENST00000465036 PARP2Q9UGN5 583 aa8.03□□□□□ -1.12
UBR4-209ENST00000465036 SMG5Q9UPR3 1016 aaKnown RBP8.03□□□□□ -1.12
UBR4-209ENST00000465036 CORINQ9Y5Q5 1042 aa8.03□□□□□ -1.12
UBR4-209ENST00000465036 CCDC180Q9P1Z9 1646 aa8.03□□□□□ -1.12
UBR4-209ENST00000465036 RBM47A0AV96 593 aaKnown RBP8.02□□□□□ -1.13
UBR4-209ENST00000465036 PEX10O60683 326 aa8.02□□□□□ -1.13
UBR4-209ENST00000465036 SPPL2CQ8IUH8 684 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms