RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 LTBP2Q14767 1821 aa11.89□□□□□ -0.51
APP-213ENST00000464867 TRIM75PA6NK02 468 aa11.89□□□□□ -0.51
APP-213ENST00000464867 CACNB2Q08289 660 aaPredicted RBP11.89□□□□□ -0.51
APP-213ENST00000464867 CAVIN4Q5BKX8 364 aa11.89□□□□□ -0.51
APP-213ENST00000464867 CCAR1Q8IX12 1150 aaKnown RBP11.89□□□□□ -0.51
APP-213ENST00000464867 SOCS4Q8WXH5 440 aa11.89□□□□□ -0.51
APP-213ENST00000464867 STK31Q9BXU1 1019 aa11.89□□□□□ -0.51
APP-213ENST00000464867 SUGT1Q9Y2Z0 365 aa11.89□□□□□ -0.51
APP-213ENST00000464867 MUC6Q6W4X9 2439 aa11.88□□□□□ -0.51
APP-213ENST00000464867 RTP1P59025 263 aa11.88□□□□□ -0.51
APP-213ENST00000464867 TRIM26Q12899 539 aaPredicted RBP11.88□□□□□ -0.51
APP-213ENST00000464867 GRIK5Q16478 980 aa11.88□□□□□ -0.51
APP-213ENST00000464867 ALYREFQ86V81 257 aaKnown RBP11.88□□□□□ -0.51
APP-213ENST00000464867 BADQ92934 168 aa11.88□□□□□ -0.51
APP-213ENST00000464867 RNPC3Q96LT9 517 aaKnown RBP11.88□□□□□ -0.51
APP-213ENST00000464867 IQSEC3Q9UPP2 1182 aaPredicted RBP11.88□□□□□ -0.51
APP-213ENST00000464867 ATP11BQ9Y2G3 1177 aa11.88□□□□□ -0.51
APP-213ENST00000464867 CCND3P30281 292 aaPredicted RBP11.87□□□□□ -0.51
APP-213ENST00000464867 AKNAD1Q5T1N1 836 aa11.87□□□□□ -0.51
APP-213ENST00000464867 PROCA1Q8NCQ7 364 aaPredicted RBP11.87□□□□□ -0.51
APP-213ENST00000464867 ZNF576Q9H609 170 aa11.87□□□□□ -0.51
APP-213ENST00000464867 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.86□□□□□ -0.51
APP-213ENST00000464867 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.86□□□□□ -0.51
APP-213ENST00000464867 MSCO60682 206 aa11.86□□□□□ -0.51
APP-213ENST00000464867 ZEB1P37275 1124 aaPredicted RBP11.86□□□□□ -0.51
APP-213ENST00000464867 RGS2P41220 211 aa11.86□□□□□ -0.51
APP-213ENST00000464867 CALD1Q05682 793 aaKnown RBP11.86□□□□□ -0.51
APP-213ENST00000464867 TMEM31Q5JXX7 168 aa11.86□□□□□ -0.51
APP-213ENST00000464867 TREML2Q5T2D2 321 aa11.86□□□□□ -0.51
APP-213ENST00000464867 ZSCAN29Q8IWY8 852 aaPredicted RBP11.86□□□□□ -0.51
APP-213ENST00000464867 CCDC146Q8IYE0 955 aa11.86□□□□□ -0.51
APP-213ENST00000464867 LRFN3Q9BTN0 628 aa11.86□□□□□ -0.51
APP-213ENST00000464867 DAXXQ9UER7 740 aaPredicted RBP11.86□□□□□ -0.51
APP-213ENST00000464867 TCF20Q9UGU0 1960 aaKnown RBP11.86□□□□□ -0.51
APP-213ENST00000464867 PLXNB2O15031 1838 aa11.86□□□□□ -0.51
APP-213ENST00000464867 PHF20L1A8MW92 1017 aa11.85□□□□□ -0.51
APP-213ENST00000464867 DNM1LO00429 736 aa11.85□□□□□ -0.51
APP-213ENST00000464867 CTNND1O60716 968 aaKnown RBP11.85□□□□□ -0.51
APP-213ENST00000464867 CASP7P55210 303 aa11.85□□□□□ -0.51
APP-213ENST00000464867 GNAI1P63096 354 aa11.85□□□□□ -0.51
APP-213ENST00000464867 RUNDC1Q96C34 613 aa11.85□□□□□ -0.51
APP-213ENST00000464867 ZNF594Q96JF6 807 aaPredicted RBP11.85□□□□□ -0.51
APP-213ENST00000464867 CWC22Q9HCG8 908 aaKnown RBP11.85□□□□□ -0.51
APP-213ENST00000464867 FRMPD3Q5JV73 1810 aa11.85□□□□□ -0.51
APP-213ENST00000464867 DOCK1Q14185 1865 aa11.85□□□□□ -0.51
APP-213ENST00000464867 DOCK2Q92608 1830 aa11.84□□□□□ -0.51
APP-213ENST00000464867 CNGA1P29973 690 aa11.84□□□□□ -0.51
APP-213ENST00000464867 MAPK4P31152 587 aa11.84□□□□□ -0.51
APP-213ENST00000464867 CCDC85BQ15834 202 aaPredicted RBP11.84□□□□□ -0.51
APP-213ENST00000464867 AAK1Q2M2I8 961 aa11.84□□□□□ -0.51
APP-213ENST00000464867 MFSD14CQ5VZR4 134 aa11.84□□□□□ -0.51
APP-213ENST00000464867 CDC42EP5Q6NZY7 148 aa11.84□□□□□ -0.51
APP-213ENST00000464867 LMBR1LQ6UX01 489 aa11.84□□□□□ -0.51
APP-213ENST00000464867 FBXO33Q7Z6M2 555 aa11.84□□□□□ -0.51
APP-213ENST00000464867 GPRC5AQ8NFJ5 357 aa11.84□□□□□ -0.51
APP-213ENST00000464867 LPAR1Q92633 364 aa11.84□□□□□ -0.51
APP-213ENST00000464867 TIFAQ96CG3 184 aa11.84□□□□□ -0.51
APP-213ENST00000464867 USP40Q9NVE5 1235 aa11.84□□□□□ -0.51
APP-213ENST00000464867 IFT57Q9NWB7 429 aa11.84□□□□□ -0.51
APP-213ENST00000464867 V9GY48 417 aaPredicted RBP11.84□□□□□ -0.51
APP-213ENST00000464867 PHIPQ8WWQ0 1821 aa11.83□□□□□ -0.51
APP-213ENST00000464867 RNF223E7ERA6 249 aa11.83□□□□□ -0.52
APP-213ENST00000464867 GGCXP38435 758 aa11.83□□□□□ -0.52
APP-213ENST00000464867 IRX3P78415 501 aaPredicted RBP11.83□□□□□ -0.52
APP-213ENST00000464867 FOXO4P98177 505 aa11.83□□□□□ -0.52
APP-213ENST00000464867 NFIAQ12857 509 aa11.83□□□□□ -0.52
APP-213ENST00000464867 PUS10Q3MIT2 529 aaKnown RBP11.83□□□□□ -0.52
APP-213ENST00000464867 C8orf58Q8NAV2 365 aa11.83□□□□□ -0.52
APP-213ENST00000464867 ARRDC4Q8NCT1 418 aa11.83□□□□□ -0.52
APP-213ENST00000464867 LINS1Q8NG48 757 aa11.83□□□□□ -0.52
APP-213ENST00000464867 P2RX7Q99572 595 aaKnown RBP11.83□□□□□ -0.52
APP-213ENST00000464867 TMUB1Q9BVT8 246 aa11.83□□□□□ -0.52
APP-213ENST00000464867 ASCC2Q9H1I8 757 aaPredicted RBP11.83□□□□□ -0.52
APP-213ENST00000464867 MORF4L1Q9UBU8 362 aa11.83□□□□□ -0.52
APP-213ENST00000464867 DDX20Q9UHI6 824 aaKnown RBP11.83□□□□□ -0.52
APP-213ENST00000464867 MROH5Q6ZUA9 1318 aa11.83□□□□□ -0.52
APP-213ENST00000464867 KBTBD13C9JR72 458 aa11.82□□□□□ -0.52
APP-213ENST00000464867 ZNF853P0CG23 659 aa11.82□□□□□ -0.52
APP-213ENST00000464867 IGFBP4P22692 258 aa11.82□□□□□ -0.52
APP-213ENST00000464867 SPP2Q13103 211 aa11.82□□□□□ -0.52
APP-213ENST00000464867 SLC39A5Q6ZMH5 540 aa11.82□□□□□ -0.52
APP-213ENST00000464867 NECAB3Q96P71 396 aaPredicted RBP11.82□□□□□ -0.52
APP-213ENST00000464867 APBA2Q99767 749 aa11.82□□□□□ -0.52
APP-213ENST00000464867 TBC1D2Q9BYX2 928 aa11.82□□□□□ -0.52
APP-213ENST00000464867 MYBBP1AQ9BQG0 1328 aaKnown RBP11.82□□□□□ -0.52
APP-213ENST00000464867 DDX11L8A8MPP1 907 aa11.81□□□□□ -0.52
APP-213ENST00000464867 GLRX3O76003 335 aaKnown RBP11.81□□□□□ -0.52
APP-213ENST00000464867 HMGCS2P54868 508 aa11.81□□□□□ -0.52
APP-213ENST00000464867 CCL14Q16627 93 aa11.81□□□□□ -0.52
APP-213ENST00000464867 CCDC129Q6ZRS4 1044 aa11.81□□□□□ -0.52
APP-213ENST00000464867 RDH13Q8NBN7 331 aa11.81□□□□□ -0.52
APP-213ENST00000464867 ZNF280CQ8ND82 737 aa11.81□□□□□ -0.52
APP-213ENST00000464867 WDR66Q8TBY9 1149 aa11.81□□□□□ -0.52
APP-213ENST00000464867 DNAAF4Q8WXU2 420 aa11.81□□□□□ -0.52
APP-213ENST00000464867 EMID1Q96A84 441 aaPredicted RBP11.81□□□□□ -0.52
APP-213ENST00000464867 PRDM12Q9H4Q4 367 aa11.81□□□□□ -0.52
APP-213ENST00000464867 DAGLAQ9Y4D2 1042 aa11.81□□□□□ -0.52
APP-213ENST00000464867 TACC3Q9Y6A5 838 aa11.81□□□□□ -0.52
APP-213ENST00000464867 RLFQ13129 1914 aa11.81□□□□□ -0.52
APP-213ENST00000464867 ENTPD3O75355 529 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms