RNA–Protein interactions for RNA: ENST00000464552.1

PRKD3-206, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-206ENST00000464552 BRMS1Q9HCU9 246 aa7.38□□□□□ -1.23
PRKD3-206ENST00000464552 PLCL1Q15111 1095 aa7.37□□□□□ -1.23
PRKD3-206ENST00000464552 USP48Q86UV5 1035 aa7.37□□□□□ -1.23
PRKD3-206ENST00000464552 KIAA0825Q8IV33 1275 aa7.37□□□□□ -1.23
PRKD3-206ENST00000464552 REXO1Q8N1G1 1221 aaKnown RBP7.37□□□□□ -1.23
PRKD3-206ENST00000464552 PIWIL2Q8TC59 973 aaKnown RBP7.37□□□□□ -1.23
PRKD3-206ENST00000464552 SPON2Q9BUD6 331 aa7.37□□□□□ -1.23
PRKD3-206ENST00000464552 EHMT1Q9H9B1 1298 aa7.37□□□□□ -1.23
PRKD3-206ENST00000464552 SEMA3GQ9NS98 782 aa7.37□□□□□ -1.23
PRKD3-206ENST00000464552 UBP1Q9NZI7 540 aa7.37□□□□□ -1.23
PRKD3-206ENST00000464552 PCDHB14Q9Y5E9 798 aa7.37□□□□□ -1.23
PRKD3-206ENST00000464552 ST14Q9Y5Y6 855 aa7.37□□□□□ -1.23
PRKD3-206ENST00000464552 CHURC1-FNTBB4DL54 471 aa7.36□□□□□ -1.23
PRKD3-206ENST00000464552 CBX7O95931 251 aa7.36□□□□□ -1.23
PRKD3-206ENST00000464552 TAL1P17542 331 aaPredicted RBP7.36□□□□□ -1.23
PRKD3-206ENST00000464552 CD96P40200 585 aa7.36□□□□□ -1.23
PRKD3-206ENST00000464552 APOBRQ0VD83 1088 aa7.36□□□□□ -1.23
PRKD3-206ENST00000464552 THAP5Q7Z6K1 395 aa7.36□□□□□ -1.23
PRKD3-206ENST00000464552 SLITRK4Q8IW52 837 aa7.36□□□□□ -1.23
PRKD3-206ENST00000464552 MRRFQ96E11 262 aaKnown RBP7.36□□□□□ -1.23
PRKD3-206ENST00000464552 CCDC74BQ96LY2 380 aa7.36□□□□□ -1.23
PRKD3-206ENST00000464552 HSPA12BQ96MM6 686 aa7.36□□□□□ -1.23
PRKD3-206ENST00000464552 KLHL3Q9UH77 587 aa7.36□□□□□ -1.23
PRKD3-206ENST00000464552 CCDC9Q9Y3X0 531 aaKnown RBP7.36□□□□□ -1.23
PRKD3-206ENST00000464552 SLC22A31A6NKX4 558 aa7.35□□□□□ -1.23
PRKD3-206ENST00000464552 DNAJA2O60884 412 aa7.35□□□□□ -1.23
PRKD3-206ENST00000464552 TNK2Q07912 1038 aa7.35□□□□□ -1.23
PRKD3-206ENST00000464552 ZNF792Q3KQV3 632 aa7.35□□□□□ -1.23
PRKD3-206ENST00000464552 SEZ6Q53EL9 994 aa7.35□□□□□ -1.23
PRKD3-206ENST00000464552 NKD1Q969G9 470 aa7.35□□□□□ -1.23
PRKD3-206ENST00000464552 EAF1Q96JC9 268 aaPredicted RBP7.35□□□□□ -1.23
PRKD3-206ENST00000464552 LMCD1Q9NZU5 365 aa7.35□□□□□ -1.23
PRKD3-206ENST00000464552 GMIPQ9P107 970 aa7.35□□□□□ -1.23
PRKD3-206ENST00000464552 ZNF165P49910 485 aa7.34□□□□□ -1.23
PRKD3-206ENST00000464552 IKZF1Q13422 519 aa7.34□□□□□ -1.23
PRKD3-206ENST00000464552 CDKAL1Q5VV42 579 aa7.34□□□□□ -1.23
PRKD3-206ENST00000464552 SLC23A3Q6PIS1 610 aa7.34□□□□□ -1.23
PRKD3-206ENST00000464552 PI4K2BQ8TCG2 481 aa7.34□□□□□ -1.23
PRKD3-206ENST00000464552 RNF141Q8WVD5 230 aa7.34□□□□□ -1.23
PRKD3-206ENST00000464552 DDX41Q9UJV9 622 aaKnown RBP7.34□□□□□ -1.23
PRKD3-206ENST00000464552 RGS13O14921 159 aa7.33□□□□□ -1.24
PRKD3-206ENST00000464552 ZNF394Q53GI3 561 aa7.33□□□□□ -1.24
PRKD3-206ENST00000464552 PHACTR4Q8IZ21 702 aa7.33□□□□□ -1.24
PRKD3-206ENST00000464552 Q96M66 194 aa7.33□□□□□ -1.24
PRKD3-206ENST00000464552 KIAA1522Q9P206 1035 aaPredicted RBP7.33□□□□□ -1.24
PRKD3-206ENST00000464552 H3BS24 57 aa7.32□□□□□ -1.24
PRKD3-206ENST00000464552 RNASE1P07998 156 aaKnown RBP7.32□□□□□ -1.24
PRKD3-206ENST00000464552 JUNBP17275 347 aaPredicted RBP7.32□□□□□ -1.24
PRKD3-206ENST00000464552 MCM4P33991 863 aa7.32□□□□□ -1.24
PRKD3-206ENST00000464552 TNNI2P48788 182 aa7.32□□□□□ -1.24
PRKD3-206ENST00000464552 RACK1P63244 317 aaKnown RBP7.32□□□□□ -1.24
PRKD3-206ENST00000464552 CLCQ05315 142 aa7.32□□□□□ -1.24
PRKD3-206ENST00000464552 ZP2Q05996 745 aa7.32□□□□□ -1.24
PRKD3-206ENST00000464552 LRRFIP1Q32MZ4 808 aaKnown RBP7.32□□□□□ -1.24
PRKD3-206ENST00000464552 CDCP2Q5VXM1 449 aa7.32□□□□□ -1.24
PRKD3-206ENST00000464552 METTL16Q86W50 562 aaKnown RBP7.32□□□□□ -1.24
PRKD3-206ENST00000464552 BAHD1Q8TBE0 780 aaPredicted RBP7.32□□□□□ -1.24
PRKD3-206ENST00000464552 KIF2CQ99661 725 aa7.32□□□□□ -1.24
PRKD3-206ENST00000464552 ASPNQ9BXN1 380 aa7.32□□□□□ -1.24
PRKD3-206ENST00000464552 ATP13A1Q9HD20 1204 aa7.32□□□□□ -1.24
PRKD3-206ENST00000464552 MBNL3Q9NUK0 354 aaKnown RBP7.32□□□□□ -1.24
PRKD3-206ENST00000464552 ADAMTS6Q9UKP5 1117 aa7.32□□□□□ -1.24
PRKD3-206ENST00000464552 KCNH3Q9ULD8 1083 aa7.32□□□□□ -1.24
PRKD3-206ENST00000464552 PCDHGB7Q9Y5F8 929 aa7.32□□□□□ -1.24
PRKD3-206ENST00000464552 UNCXA6NJT0 531 aa7.31□□□□□ -1.24
PRKD3-206ENST00000464552 ITGB5P18084 799 aa7.31□□□□□ -1.24
PRKD3-206ENST00000464552 GBP1P32455 592 aa7.31□□□□□ -1.24
PRKD3-206ENST00000464552 ARSHQ5FYA8 562 aa7.31□□□□□ -1.24
PRKD3-206ENST00000464552 GK5Q6ZS86 529 aa7.31□□□□□ -1.24
PRKD3-206ENST00000464552 UBE2FQ969M7 185 aa7.31□□□□□ -1.24
PRKD3-206ENST00000464552 KREMEN1Q96MU8 473 aa7.31□□□□□ -1.24
PRKD3-206ENST00000464552 CNNM2Q9H8M5 875 aa7.31□□□□□ -1.24
PRKD3-206ENST00000464552 MEIS3P2A8K0S8 358 aa7.3□□□□□ -1.24
PRKD3-206ENST00000464552 PAX4O43316 350 aa7.3□□□□□ -1.24
PRKD3-206ENST00000464552 SRFP11831 508 aa7.3□□□□□ -1.24
PRKD3-206ENST00000464552 RAG1P15918 1043 aa7.3□□□□□ -1.24
PRKD3-206ENST00000464552 CCNFP41002 786 aa7.3□□□□□ -1.24
PRKD3-206ENST00000464552 OVOS1Q6IE37 1185 aa7.3□□□□□ -1.24
PRKD3-206ENST00000464552 TMPRSS7Q7RTY8 843 aa7.3□□□□□ -1.24
PRKD3-206ENST00000464552 ATG4DQ86TL0 474 aaPredicted RBP7.3□□□□□ -1.24
PRKD3-206ENST00000464552 ZNF654Q8IZM8 581 aa7.3□□□□□ -1.24
PRKD3-206ENST00000464552 DTWD2Q8NBA8 298 aa7.3□□□□□ -1.24
PRKD3-206ENST00000464552 TMEM40Q8WWA1 233 aa7.3□□□□□ -1.24
PRKD3-206ENST00000464552 VWCEQ96DN2 955 aa7.3□□□□□ -1.24
PRKD3-206ENST00000464552 ATG4CQ96DT6 458 aa7.3□□□□□ -1.24
PRKD3-206ENST00000464552 GPR62Q9BZJ7 368 aa7.3□□□□□ -1.24
PRKD3-206ENST00000464552 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.3□□□□□ -1.24
PRKD3-206ENST00000464552 DUSP15Q9H1R2 295 aaPredicted RBP7.3□□□□□ -1.24
PRKD3-206ENST00000464552 TRIT1Q9H3H1 467 aaKnown RBP7.3□□□□□ -1.24
PRKD3-206ENST00000464552 RC3H2Q9HBD1 1191 aaKnown RBP7.3□□□□□ -1.24
PRKD3-206ENST00000464552 ZSWIM5Q9P217 1185 aa7.3□□□□□ -1.24
PRKD3-206ENST00000464552 BIN1O00499 593 aa7.29□□□□□ -1.24
PRKD3-206ENST00000464552 NLRC3Q7RTR2 1065 aa7.29□□□□□ -1.24
PRKD3-206ENST00000464552 UBOX5O94941 541 aa7.28□□□□□ -1.24
PRKD3-206ENST00000464552 IMPDH2P12268 514 aa7.28□□□□□ -1.24
PRKD3-206ENST00000464552 CHMP4BP1P59074 171 aa7.28□□□□□ -1.24
PRKD3-206ENST00000464552 HDLBPQ00341 1268 aaKnown RBP7.28□□□□□ -1.24
PRKD3-206ENST00000464552 RAD51AP2Q09MP3 1159 aa7.28□□□□□ -1.24
PRKD3-206ENST00000464552 LRRN4CLQ8ND94 238 aa7.28□□□□□ -1.24
PRKD3-206ENST00000464552 SPATA32Q96LK8 384 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms