RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 STK26Q9P289 416 aa7.8□□□□□ -1.16
CD46-211ENST00000464082 PDGFAP04085 211 aa7.79□□□□□ -1.16
CD46-211ENST00000464082 FUT4P22083 530 aa7.79□□□□□ -1.16
CD46-211ENST00000464082 MAOBP27338 520 aa7.79□□□□□ -1.16
CD46-211ENST00000464082 MESP2Q0VG99 397 aa7.79□□□□□ -1.16
CD46-211ENST00000464082 ELOAQ14241 798 aaKnown RBP7.79□□□□□ -1.16
CD46-211ENST00000464082 CILP2Q8IUL8 1156 aa7.79□□□□□ -1.16
CD46-211ENST00000464082 TMEM40Q8WWA1 233 aa7.79□□□□□ -1.16
CD46-211ENST00000464082 QRICH2Q9H0J4 1663 aa7.79□□□□□ -1.16
CD46-211ENST00000464082 SPATA31A6Q5VVP1 1343 aa7.78□□□□□ -1.16
CD46-211ENST00000464082 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.78□□□□□ -1.16
CD46-211ENST00000464082 RPLP1P05386 114 aaKnown RBP7.78□□□□□ -1.16
CD46-211ENST00000464082 AKAP4Q5JQC9 854 aa7.78□□□□□ -1.16
CD46-211ENST00000464082 PLD6Q8N2A8 252 aaKnown RBP7.78□□□□□ -1.16
CD46-211ENST00000464082 LRRN4CLQ8ND94 238 aa7.78□□□□□ -1.16
CD46-211ENST00000464082 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.77□□□□□ -1.17
CD46-211ENST00000464082 ECEL1O95672 775 aa7.77□□□□□ -1.17
CD46-211ENST00000464082 PEAR1Q5VY43 1037 aaPredicted RBP7.77□□□□□ -1.17
CD46-211ENST00000464082 FAM181AQ8N9Y4 354 aa7.77□□□□□ -1.17
CD46-211ENST00000464082 SLC38A3Q99624 504 aa7.77□□□□□ -1.17
CD46-211ENST00000464082 DAGLAQ9Y4D2 1042 aa7.77□□□□□ -1.17
CD46-211ENST00000464082 U3KQE9 123 aa7.77□□□□□ -1.17
CD46-211ENST00000464082 TULP4Q9NRJ4 1543 aa7.77□□□□□ -1.17
CD46-211ENST00000464082 PLCH1Q4KWH8 1693 aa7.76□□□□□ -1.17
CD46-211ENST00000464082 ASPAP45381 313 aa7.76□□□□□ -1.17
CD46-211ENST00000464082 TMEM164Q5U3C3 297 aa7.76□□□□□ -1.17
CD46-211ENST00000464082 PRAM1Q96QH2 718 aa7.76□□□□□ -1.17
CD46-211ENST00000464082 AP4E1Q9UPM8 1137 aa7.76□□□□□ -1.17
CD46-211ENST00000464082 PRR36Q9H6K5 1346 aa7.76□□□□□ -1.17
CD46-211ENST00000464082 ATP7BP35670 1465 aa7.75□□□□□ -1.17
CD46-211ENST00000464082 TNFRSF21O75509 655 aa7.75□□□□□ -1.17
CD46-211ENST00000464082 EDN3P14138 238 aa7.75□□□□□ -1.17
CD46-211ENST00000464082 ZNF423Q2M1K9 1284 aa7.75□□□□□ -1.17
CD46-211ENST00000464082 KRTAP19-4Q3LI73 84 aa7.75□□□□□ -1.17
CD46-211ENST00000464082 LRRC59Q96AG4 307 aaKnown RBP7.75□□□□□ -1.17
CD46-211ENST00000464082 MISP3Q96FF7 219 aa7.75□□□□□ -1.17
CD46-211ENST00000464082 SIN3AQ96ST3 1273 aa7.75□□□□□ -1.17
CD46-211ENST00000464082 GSX1Q9H4S2 264 aaPredicted RBP7.75□□□□□ -1.17
CD46-211ENST00000464082 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.75□□□□□ -1.17
CD46-211ENST00000464082 TRAK1Q9UPV9 953 aa7.75□□□□□ -1.17
CD46-211ENST00000464082 ANKARQ7Z5J8 1434 aa7.75□□□□□ -1.17
CD46-211ENST00000464082 BRWD3Q6RI45 1802 aa7.75□□□□□ -1.17
CD46-211ENST00000464082 NRAPQ86VF7 1730 aa7.75□□□□□ -1.17
CD46-211ENST00000464082 NWD2Q9ULI1 1742 aa7.75□□□□□ -1.17
CD46-211ENST00000464082 PHACTR2O75167 634 aa7.74□□□□□ -1.17
CD46-211ENST00000464082 PCSK2P16519 638 aa7.74□□□□□ -1.17
CD46-211ENST00000464082 SAFB2Q14151 953 aaKnown RBP eCLIP7.74□□□□□ -1.171e-6■■□□□ 13.1
CD46-211ENST00000464082 PI4K2BQ8TCG2 481 aa7.74□□□□□ -1.17
CD46-211ENST00000464082 NETO1Q8TDF5 533 aa7.74□□□□□ -1.17
CD46-211ENST00000464082 RAD18Q9NS91 495 aa7.74□□□□□ -1.17
CD46-211ENST00000464082 FOXD3Q9UJU5 478 aaPredicted RBP7.74□□□□□ -1.17
CD46-211ENST00000464082 NPHP3Q7Z494 1330 aa7.74□□□□□ -1.17
CD46-211ENST00000464082 PHRF1Q9P1Y6 1649 aaKnown RBP7.74□□□□□ -1.17
CD46-211ENST00000464082 AKAP12Q02952 1782 aa7.74□□□□□ -1.17
CD46-211ENST00000464082 XPCQ01831 940 aaPredicted RBP7.73□□□□□ -1.17
CD46-211ENST00000464082 POU4F3Q15319 338 aa7.73□□□□□ -1.17
CD46-211ENST00000464082 TTC16Q8NEE8 873 aa7.73□□□□□ -1.17
CD46-211ENST00000464082 CLP1Q92989 425 aaKnown RBP7.73□□□□□ -1.17
CD46-211ENST00000464082 FAM84AQ96KN4 292 aa7.73□□□□□ -1.17
CD46-211ENST00000464082 TNS3Q68CZ2 1445 aa7.72□□□□□ -1.17
CD46-211ENST00000464082 LRRC10BA6NIK2 292 aa7.72□□□□□ -1.17
CD46-211ENST00000464082 CYP11A1P05108 521 aa7.72□□□□□ -1.17
CD46-211ENST00000464082 CFPP27918 469 aa7.72□□□□□ -1.17
CD46-211ENST00000464082 MZF1P28698 734 aaPredicted RBP7.72□□□□□ -1.17
CD46-211ENST00000464082 PCDH1Q08174 1060 aa7.72□□□□□ -1.17
CD46-211ENST00000464082 CDK5R2Q13319 367 aa7.72□□□□□ -1.17
CD46-211ENST00000464082 CYP27C1Q4G0S4 372 aa7.72□□□□□ -1.17
CD46-211ENST00000464082 NOM1Q5C9Z4 860 aaKnown RBP7.72□□□□□ -1.17
CD46-211ENST00000464082 HIRIP3Q9BW71 556 aaPredicted RBP7.72□□□□□ -1.17
CD46-211ENST00000464082 AFF2P51816 1311 aa7.72□□□□□ -1.17
CD46-211ENST00000464082 SPATA31A3Q5VYP0 1347 aa7.72□□□□□ -1.17
CD46-211ENST00000464082 GLI3P10071 1580 aa7.71□□□□□ -1.17
CD46-211ENST00000464082 BCL9LQ86UU0 1499 aa7.71□□□□□ -1.18
CD46-211ENST00000464082 CDK12Q9NYV4 1490 aaPredicted RBP7.71□□□□□ -1.18
CD46-211ENST00000464082 FAM87AP0C7U9 286 aa7.71□□□□□ -1.18
CD46-211ENST00000464082 SRPK2P78362 688 aaKnown RBP7.71□□□□□ -1.18
CD46-211ENST00000464082 LILRA6Q6PI73 481 aa7.71□□□□□ -1.18
CD46-211ENST00000464082 LCNL1Q6ZST4 164 aa7.71□□□□□ -1.18
CD46-211ENST00000464082 C1QL4Q86Z23 238 aa7.71□□□□□ -1.18
CD46-211ENST00000464082 TRIM56Q9BRZ2 755 aaKnown RBP7.71□□□□□ -1.18
CD46-211ENST00000464082 KRTAP17-1Q9BYP8 105 aa7.71□□□□□ -1.18
CD46-211ENST00000464082 VAV3Q9UKW4 847 aa7.71□□□□□ -1.18
CD46-211ENST00000464082 POLIQ9UNA4 740 aa7.71□□□□□ -1.18
CD46-211ENST00000464082 SBNO1A3KN83 1393 aa7.71□□□□□ -1.18
CD46-211ENST00000464082 RGS12O14924 1447 aa7.7□□□□□ -1.18
CD46-211ENST00000464082 ATRNO75882 1429 aa7.7□□□□□ -1.18
CD46-211ENST00000464082 EP400Q96L91 3159 aa7.7□□□□□ -1.18
CD46-211ENST00000464082 SLIT2O94813 1529 aa7.7□□□□□ -1.18
CD46-211ENST00000464082 EIF1AXP47813 144 aaKnown RBP7.7□□□□□ -1.18
CD46-211ENST00000464082 PRKCQQ04759 706 aa7.7□□□□□ -1.18
CD46-211ENST00000464082 SPRED3Q2MJR0 410 aa7.7□□□□□ -1.18
CD46-211ENST00000464082 NBPF8Q3BBV2 869 aa7.7□□□□□ -1.18
CD46-211ENST00000464082 HELQQ8TDG4 1101 aa7.7□□□□□ -1.18
CD46-211ENST00000464082 POGKQ9P215 609 aa7.7□□□□□ -1.18
CD46-211ENST00000464082 PPP1R9AQ9ULJ8 1098 aa7.7□□□□□ -1.18
CD46-211ENST00000464082 NRKQ7Z2Y5 1582 aa7.7□□□□□ -1.18
CD46-211ENST00000464082 MON2Q7Z3U7 1717 aa7.69□□□□□ -1.18
CD46-211ENST00000464082 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.69□□□□□ -1.18
CD46-211ENST00000464082 A0A096LPE4 126 aa7.69□□□□□ -1.18
CD46-211ENST00000464082 A0A1W2PPZ6 126 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms