RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 GH2P01242 217 aa17.73■□□□□ 0.43
SMC1A-204ENST00000463684 ARHGAP45Q92619 1136 aa17.73■□□□□ 0.43
SMC1A-204ENST00000463684 C12orf42Q96LP6 360 aa17.73■□□□□ 0.43
SMC1A-204ENST00000463684 IGSF3O75054 1194 aa17.72■□□□□ 0.43
SMC1A-204ENST00000463684 CNMDO75829 334 aa17.72■□□□□ 0.43
SMC1A-204ENST00000463684 GNAI2P04899 355 aa17.72■□□□□ 0.43
SMC1A-204ENST00000463684 RTP1P59025 263 aa17.72■□□□□ 0.43
SMC1A-204ENST00000463684 CATSPERGQ6ZRH7 1159 aa17.72■□□□□ 0.43
SMC1A-204ENST00000463684 TRMT2AQ8IZ69 625 aaKnown RBP17.72■□□□□ 0.43
SMC1A-204ENST00000463684 ARRDC4Q8NCT1 418 aa17.72■□□□□ 0.43
SMC1A-204ENST00000463684 ATP11BQ9Y2G3 1177 aa17.72■□□□□ 0.43
SMC1A-204ENST00000463684 HOXC6P09630 235 aa17.71■□□□□ 0.43
SMC1A-204ENST00000463684 CYP2C19P33261 490 aa17.71■□□□□ 0.43
SMC1A-204ENST00000463684 RAB3GAP1Q15042 981 aa17.71■□□□□ 0.43
SMC1A-204ENST00000463684 ADGRA1Q86SQ6 560 aa17.71■□□□□ 0.43
SMC1A-204ENST00000463684 CDX2Q99626 313 aaPredicted RBP17.71■□□□□ 0.43
SMC1A-204ENST00000463684 DNAH12Q6ZR08 3092 aa17.7■□□□□ 0.42
SMC1A-204ENST00000463684 ZNF316A6NFI3 1004 aaPredicted RBP17.7■□□□□ 0.42
SMC1A-204ENST00000463684 CYP2E1P05181 493 aaPredicted RBP17.7■□□□□ 0.42
SMC1A-204ENST00000463684 GRB14Q14449 540 aa17.7■□□□□ 0.42
SMC1A-204ENST00000463684 GJC2Q5T442 439 aaPredicted RBP17.7■□□□□ 0.42
SMC1A-204ENST00000463684 TATDN1Q6P1N9 297 aa17.7■□□□□ 0.42
SMC1A-204ENST00000463684 DPP9Q86TI2 863 aa17.7■□□□□ 0.42
SMC1A-204ENST00000463684 NPLOC4Q8TAT6 608 aa17.7■□□□□ 0.42
SMC1A-204ENST00000463684 KIAA1683Q9H0B3 1180 aa17.7■□□□□ 0.42
SMC1A-204ENST00000463684 SEMA6BQ9H3T3 888 aa17.7■□□□□ 0.42
SMC1A-204ENST00000463684 CABP5Q9NP86 173 aa17.7■□□□□ 0.42
SMC1A-204ENST00000463684 GPR108Q9NPR9 543 aa17.7■□□□□ 0.42
SMC1A-204ENST00000463684 LAMA2P24043 3122 aaKnown RBP17.7■□□□□ 0.42
SMC1A-204ENST00000463684 PNMA6EA0A0J9YXQ4 647 aa17.69■□□□□ 0.42
SMC1A-204ENST00000463684 KBTBD13C9JR72 458 aa17.69■□□□□ 0.42
SMC1A-204ENST00000463684 CYP7A1P22680 504 aa17.69■□□□□ 0.42
SMC1A-204ENST00000463684 USP5P45974 858 aa17.69■□□□□ 0.42
SMC1A-204ENST00000463684 RARSP54136 660 aaKnown RBP17.69■□□□□ 0.42
SMC1A-204ENST00000463684 DYNLL1P63167 89 aaKnown RBP17.69■□□□□ 0.42
SMC1A-204ENST00000463684 SHHQ15465 462 aa17.69■□□□□ 0.42
SMC1A-204ENST00000463684 CERKLQ49MI3 558 aaPredicted RBP17.69■□□□□ 0.42
SMC1A-204ENST00000463684 LBX2Q6XYB7 198 aa17.69■□□□□ 0.42
SMC1A-204ENST00000463684 SLC39A5Q6ZMH5 540 aa17.69■□□□□ 0.42
SMC1A-204ENST00000463684 CERS3Q8IU89 383 aa17.69■□□□□ 0.42
SMC1A-204ENST00000463684 MAFAQ8NHW3 353 aaPredicted RBP17.69■□□□□ 0.42
SMC1A-204ENST00000463684 PRDM5Q9NQX1 630 aaPredicted RBP17.69■□□□□ 0.42
SMC1A-204ENST00000463684 BTBD7Q9P203 1132 aa17.69■□□□□ 0.42
SMC1A-204ENST00000463684 SERPINB13Q9UIV8 391 aa17.69■□□□□ 0.42
SMC1A-204ENST00000463684 VCAM1P19320 739 aa17.68■□□□□ 0.42
SMC1A-204ENST00000463684 ZAP70P43403 619 aa17.68■□□□□ 0.42
SMC1A-204ENST00000463684 OS9Q13438 667 aaPredicted RBP17.68■□□□□ 0.42
SMC1A-204ENST00000463684 ABCB5Q2M3G0 1257 aa17.68■□□□□ 0.42
SMC1A-204ENST00000463684 TNNI3KQ59H18 835 aa17.68■□□□□ 0.42
SMC1A-204ENST00000463684 TTC6Q86TZ1 520 aa17.68■□□□□ 0.42
SMC1A-204ENST00000463684 DBNDD2Q9BQY9 259 aa17.68■□□□□ 0.42
SMC1A-204ENST00000463684 FPGT-TNNI3KV9GXZ4 949 aa17.68■□□□□ 0.42
SMC1A-204ENST00000463684 IPO8O15397 1037 aaKnown RBP17.67■□□□□ 0.42
SMC1A-204ENST00000463684 STRNO43815 780 aa17.67■□□□□ 0.42
SMC1A-204ENST00000463684 MYCNP04198 464 aaPredicted RBP17.67■□□□□ 0.42
SMC1A-204ENST00000463684 CYBAP13498 195 aa17.67■□□□□ 0.42
SMC1A-204ENST00000463684 TRPV1Q8NER1 839 aa17.67■□□□□ 0.42
SMC1A-204ENST00000463684 BADQ92934 168 aa17.67■□□□□ 0.42
SMC1A-204ENST00000463684 ZNF512BQ96KM6 892 aaPredicted RBP17.67■□□□□ 0.42
SMC1A-204ENST00000463684 EHD4Q9H223 541 aa17.67■□□□□ 0.42
SMC1A-204ENST00000463684 RPAP3Q9H6T3 665 aaPredicted RBP17.67■□□□□ 0.42
SMC1A-204ENST00000463684 SIPA1L1O43166 1804 aa17.67■□□□□ 0.42
SMC1A-204ENST00000463684 SPDYE16A6NNV3 312 aaPredicted RBP17.66■□□□□ 0.42
SMC1A-204ENST00000463684 SMAD3P84022 425 aaKnown RBP17.66■□□□□ 0.42
SMC1A-204ENST00000463684 C9orf50Q5SZB4 431 aa17.66■□□□□ 0.42
SMC1A-204ENST00000463684 OLFML2BQ68BL8 750 aa17.66■□□□□ 0.42
SMC1A-204ENST00000463684 MIGA1Q8NAN2 632 aa17.66■□□□□ 0.42
SMC1A-204ENST00000463684 ACER1Q8TDN7 264 aa17.66■□□□□ 0.42
SMC1A-204ENST00000463684 PIH1D3Q9NQM4 214 aaKnown RBP17.66■□□□□ 0.42
SMC1A-204ENST00000463684 SLC5A4Q9NY91 659 aa17.66■□□□□ 0.42
SMC1A-204ENST00000463684 HOXC10Q9NYD6 342 aa17.66■□□□□ 0.42
SMC1A-204ENST00000463684 IDH1O75874 414 aaKnown RBP17.65■□□□□ 0.42
SMC1A-204ENST00000463684 ADORA2AP29274 412 aa17.65■□□□□ 0.42
SMC1A-204ENST00000463684 COG2Q14746 738 aa17.65■□□□□ 0.42
SMC1A-204ENST00000463684 ANO1Q5XXA6 986 aa17.65■□□□□ 0.42
SMC1A-204ENST00000463684 MYLIPQ8WY64 445 aa17.65■□□□□ 0.42
SMC1A-204ENST00000463684 SEPT4O43236 478 aa17.64■□□□□ 0.41
SMC1A-204ENST00000463684 ADCYAP1R1P41586 468 aa17.64■□□□□ 0.41
SMC1A-204ENST00000463684 TRIM60Q495X7 471 aa17.64■□□□□ 0.41
SMC1A-204ENST00000463684 SYMPKQ92797 1274 aaKnown RBP17.64■□□□□ 0.41
SMC1A-204ENST00000463684 MOV10L1Q9BXT6 1211 aaKnown RBP17.64■□□□□ 0.41
SMC1A-204ENST00000463684 PRDM6Q9NQX0 595 aa17.64■□□□□ 0.41
SMC1A-204ENST00000463684 IGHA2P01877 340 aa17.63■□□□□ 0.41
SMC1A-204ENST00000463684 FOSL2P15408 326 aa17.63■□□□□ 0.41
SMC1A-204ENST00000463684 MAGEB6Q8N7X4 407 aa17.63■□□□□ 0.41
SMC1A-204ENST00000463684 MAST2Q6P0Q8 1798 aa17.62■□□□□ 0.41
SMC1A-204ENST00000463684 SURF6O75683 361 aaKnown RBP17.62■□□□□ 0.41
SMC1A-204ENST00000463684 POLR3DP05423 398 aaPredicted RBP17.62■□□□□ 0.41
SMC1A-204ENST00000463684 TRIM27P14373 513 aa17.62■□□□□ 0.41
SMC1A-204ENST00000463684 SNX17Q15036 470 aa17.62■□□□□ 0.41
SMC1A-204ENST00000463684 SHCBP1Q8NEM2 672 aa17.62■□□□□ 0.41
SMC1A-204ENST00000463684 FRAT1Q92837 279 aaPredicted RBP17.62■□□□□ 0.41
SMC1A-204ENST00000463684 FERMT2Q96AC1 680 aa17.62■□□□□ 0.41
SMC1A-204ENST00000463684 TANGO6Q9C0B7 1094 aa17.62■□□□□ 0.41
SMC1A-204ENST00000463684 SPATC1LQ9H0A9 340 aa17.62■□□□□ 0.41
SMC1A-204ENST00000463684 TTYH1Q9H313 450 aaPredicted RBP17.62■□□□□ 0.41
SMC1A-204ENST00000463684 PDLIM7Q9NR12 457 aa17.62■□□□□ 0.41
SMC1A-204ENST00000463684 EYSQ5T1H1 3165 aa17.61■□□□□ 0.41
SMC1A-204ENST00000463684 TRIM43BA6NCK2 446 aa17.61■□□□□ 0.41
SMC1A-204ENST00000463684 MPHOSPH10O00566 681 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms