RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 AGTPBP1Q9UPW5 1226 aa21.12■□□□□ 0.97
VPS52-214ENST00000463486 ZMYM6O95789 1325 aa21.11■□□□□ 0.97
VPS52-214ENST00000463486 C19orf81C9J6K1 198 aa21.11■□□□□ 0.97
VPS52-214ENST00000463486 TLR2O60603 784 aa21.11■□□□□ 0.97
VPS52-214ENST00000463486 CHMLP26374 656 aa21.11■□□□□ 0.97
VPS52-214ENST00000463486 PPARAQ07869 468 aa21.11■□□□□ 0.97
VPS52-214ENST00000463486 TMEM179Q6ZVK1 233 aa21.11■□□□□ 0.97
VPS52-214ENST00000463486 ZFYVE28Q9HCC9 887 aa21.11■□□□□ 0.97
VPS52-214ENST00000463486 FGRP09769 529 aa21.1■□□□□ 0.97
VPS52-214ENST00000463486 CYP2C8P10632 490 aa21.1■□□□□ 0.97
VPS52-214ENST00000463486 C17orf99Q6UX52 265 aa21.1■□□□□ 0.97
VPS52-214ENST00000463486 CLEC10AQ8IUN9 316 aa21.1■□□□□ 0.97
VPS52-214ENST00000463486 STK11IPQ8N1F8 1099 aa21.1■□□□□ 0.97
VPS52-214ENST00000463486 KIAA1683Q9H0B3 1180 aa21.1■□□□□ 0.97
VPS52-214ENST00000463486 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.1■□□□□ 0.97
VPS52-214ENST00000463486 GREB1LQ9C091 1923 aaPredicted RBP21.1■□□□□ 0.97
VPS52-214ENST00000463486 MPHOSPH10O00566 681 aaKnown RBP21.09■□□□□ 0.97
VPS52-214ENST00000463486 FKTNO75072 461 aa21.09■□□□□ 0.97
VPS52-214ENST00000463486 PRDM1O75626 825 aa21.09■□□□□ 0.97
VPS52-214ENST00000463486 C12orf42Q96LP6 360 aa21.09■□□□□ 0.97
VPS52-214ENST00000463486 NBPF3Q9H094 633 aa21.09■□□□□ 0.97
VPS52-214ENST00000463486 INCENPQ9NQS7 918 aa21.09■□□□□ 0.97
VPS52-214ENST00000463486 PPP4R2Q9NY27 417 aa21.09■□□□□ 0.97
VPS52-214ENST00000463486 IGKV6D-41A0A0C4DH26 115 aa21.08■□□□□ 0.97
VPS52-214ENST00000463486 HOXA7P31268 230 aaPredicted RBP21.08■□□□□ 0.97
VPS52-214ENST00000463486 CTDSPL2Q05D32 466 aa21.08■□□□□ 0.97
VPS52-214ENST00000463486 MYH8P13535 1937 aa21.08■□□□□ 0.96
VPS52-214ENST00000463486 MFAP1P55081 439 aaKnown RBP21.07■□□□□ 0.96
VPS52-214ENST00000463486 KIAA1755Q5JYT7 1200 aa21.07■□□□□ 0.96
VPS52-214ENST00000463486 USP17L2Q6R6M4 530 aa21.07■□□□□ 0.96
VPS52-214ENST00000463486 MKNK2Q9HBH9 465 aa21.07■□□□□ 0.96
VPS52-214ENST00000463486 HTTP42858 3142 aa21.06■□□□□ 0.96
VPS52-214ENST00000463486 BCRP11274 1271 aa21.06■□□□□ 0.96
VPS52-214ENST00000463486 SP3Q02447 781 aa21.06■□□□□ 0.96
VPS52-214ENST00000463486 BMP2KLQ5H9B9 411 aa21.06■□□□□ 0.96
VPS52-214ENST00000463486 POTEEQ6S8J3 1075 aa21.06■□□□□ 0.96
VPS52-214ENST00000463486 PARK7Q99497 189 aaKnown RBP21.06■□□□□ 0.96
VPS52-214ENST00000463486 KANSL2Q9H9L4 492 aa21.06■□□□□ 0.96
VPS52-214ENST00000463486 NKX2-3Q8TAU0 364 aa21.05■□□□□ 0.96
VPS52-214ENST00000463486 DSCC1Q9BVC3 393 aa21.05■□□□□ 0.96
VPS52-214ENST00000463486 ASCC2Q9H1I8 757 aaPredicted RBP21.05■□□□□ 0.96
VPS52-214ENST00000463486 TMOD4Q9NZQ9 345 aa21.05■□□□□ 0.96
VPS52-214ENST00000463486 CPA4Q9UI42 421 aa21.05■□□□□ 0.96
VPS52-214ENST00000463486 TMX2Q9Y320 296 aa21.05■□□□□ 0.96
VPS52-214ENST00000463486 RAD50Q92878 1312 aa21.04■□□□□ 0.96
VPS52-214ENST00000463486 SGSM2O43147 1006 aa21.04■□□□□ 0.96
VPS52-214ENST00000463486 EEF2P13639 858 aaKnown RBP21.04■□□□□ 0.96
VPS52-214ENST00000463486 USP14P54578 494 aa21.04■□□□□ 0.96
VPS52-214ENST00000463486 ICA1Q05084 483 aa21.04■□□□□ 0.96
VPS52-214ENST00000463486 PDE4BQ07343 736 aa21.04■□□□□ 0.96
VPS52-214ENST00000463486 ZYXQ15942 572 aaKnown RBP21.04■□□□□ 0.96
VPS52-214ENST00000463486 NEDD1Q8NHV4 660 aa21.04■□□□□ 0.96
VPS52-214ENST00000463486 ZNF287Q9HBT7 754 aa21.04■□□□□ 0.96
VPS52-214ENST00000463486 PLIN4Q96Q06 1357 aa21.04■□□□□ 0.96
VPS52-214ENST00000463486 ORC4O43929 436 aa21.03■□□□□ 0.96
VPS52-214ENST00000463486 VCAM1P19320 739 aa21.03■□□□□ 0.96
VPS52-214ENST00000463486 CTGFP29279 349 aa21.03■□□□□ 0.96
VPS52-214ENST00000463486 CTU1Q7Z7A3 348 aaKnown RBP21.03■□□□□ 0.96
VPS52-214ENST00000463486 ZNF444Q8N0Y2 327 aaPredicted RBP21.03■□□□□ 0.96
VPS52-214ENST00000463486 CD99L2Q8TCZ2 262 aa21.03■□□□□ 0.96
VPS52-214ENST00000463486 P2RX7Q99572 595 aaKnown RBP21.03■□□□□ 0.96
VPS52-214ENST00000463486 SLC3A2P08195 630 aaKnown RBP21.02■□□□□ 0.96
VPS52-214ENST00000463486 HAND2P61296 217 aa21.02■□□□□ 0.96
VPS52-214ENST00000463486 PABPC4Q13310 644 aaKnown RBP eCLIP21.02■□□□□ 0.96
VPS52-214ENST00000463486 FAM47AQ5JRC9 791 aa21.02■□□□□ 0.96
VPS52-214ENST00000463486 TBC1D10CQ8IV04 446 aa21.02■□□□□ 0.96
VPS52-214ENST00000463486 FEZ1Q99689 392 aa21.02■□□□□ 0.96
VPS52-214ENST00000463486 ARHGAP39Q9C0H5 1083 aa21.02■□□□□ 0.96
VPS52-214ENST00000463486 MCOLN1Q9GZU1 580 aa21.02■□□□□ 0.96
VPS52-214ENST00000463486 NYAP2Q9P242 653 aa21.02■□□□□ 0.96
VPS52-214ENST00000463486 LACTBP83111 547 aaPredicted RBP21.01■□□□□ 0.95
VPS52-214ENST00000463486 TFAP4Q01664 338 aa21.01■□□□□ 0.95
VPS52-214ENST00000463486 PTH1RQ03431 593 aa21.01■□□□□ 0.95
VPS52-214ENST00000463486 CATSPERGQ6ZRH7 1159 aa21.01■□□□□ 0.95
VPS52-214ENST00000463486 TNS4Q8IZW8 715 aa21.01■□□□□ 0.95
VPS52-214ENST00000463486 MKL1Q969V6 931 aa21.01■□□□□ 0.95
VPS52-214ENST00000463486 CEP95Q96GE4 821 aa21.01■□□□□ 0.95
VPS52-214ENST00000463486 VCPKMTQ9H867 229 aa21.01■□□□□ 0.95
VPS52-214ENST00000463486 IL17RBQ9NRM6 502 aa21.01■□□□□ 0.95
VPS52-214ENST00000463486 MTMR4Q9NYA4 1195 aa21.01■□□□□ 0.95
VPS52-214ENST00000463486 PNMA3Q9UL41 463 aa21.01■□□□□ 0.95
VPS52-214ENST00000463486 NOVP48745 357 aa21■□□□□ 0.95
VPS52-214ENST00000463486 OTOP1Q7RTM1 612 aa21■□□□□ 0.95
VPS52-214ENST00000463486 RUFY2Q8WXA3 655 aa21■□□□□ 0.95
VPS52-214ENST00000463486 ERO1AQ96HE7 468 aa21■□□□□ 0.95
VPS52-214ENST00000463486 ARHGEF10LQ9HCE6 1279 aa21■□□□□ 0.95
VPS52-214ENST00000463486 USP17L15C9J2P7 530 aa20.99■□□□□ 0.95
VPS52-214ENST00000463486 USP17L13C9JLJ4 530 aa20.99■□□□□ 0.95
VPS52-214ENST00000463486 USP17L11C9JVI0 530 aa20.99■□□□□ 0.95
VPS52-214ENST00000463486 USP17L18D6R9N7 530 aa20.99■□□□□ 0.95
VPS52-214ENST00000463486 USP17L22D6RA61 530 aa20.99■□□□□ 0.95
VPS52-214ENST00000463486 USP17L17D6RBQ6 530 aa20.99■□□□□ 0.95
VPS52-214ENST00000463486 USP17L19D6RCP7 530 aa20.99■□□□□ 0.95
VPS52-214ENST00000463486 USP17L20D6RJB6 530 aa20.99■□□□□ 0.95
VPS52-214ENST00000463486 OSBPP22059 807 aa20.99■□□□□ 0.95
VPS52-214ENST00000463486 HERVK_113P62684 666 aa20.99■□□□□ 0.95
VPS52-214ENST00000463486 USP17L24Q0WX57 530 aa20.99■□□□□ 0.95
VPS52-214ENST00000463486 AKNAD1Q5T1N1 836 aa20.99■□□□□ 0.95
VPS52-214ENST00000463486 STAG1Q8WVM7 1258 aa20.99■□□□□ 0.95
VPS52-214ENST00000463486 RPAP3Q9H6T3 665 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms