RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 SH3TC1Q8TE82 1336 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 CFAP69A5D8W1 941 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 SCAMP3O14828 347 aaKnown RBP9.94□□□□□ -0.82
SHQ1-203ENST00000463369 CLGNO14967 610 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 SRGAP3O43295 1099 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 NRDCO43847 1150 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 STK10O94804 968 aaKnown RBP9.94□□□□□ -0.82
SHQ1-203ENST00000463369 SFPQP23246 707 aaKnown RBP eCLIP9.94□□□□□ -0.82
SHQ1-203ENST00000463369 TM4SF1P30408 202 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 PTH1RQ03431 593 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 NFIXQ14938 502 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 PRPF40BQ6NWY9 871 aaKnown RBP9.94□□□□□ -0.82
SHQ1-203ENST00000463369 LEKR1Q6ZMV7 388 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 BICDL1Q6ZP65 573 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 SYNE4Q8N205 404 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 SCYL1Q96KG9 808 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 NYXQ9GZU5 481 aa9.94□□□□□ -0.82
SHQ1-203ENST00000463369 MAFBQ9Y5Q3 323 aaPredicted RBP9.94□□□□□ -0.82
SHQ1-203ENST00000463369 CARMIL3Q8ND23 1372 aa9.93□□□□□ -0.82
SHQ1-203ENST00000463369 IRS4O14654 1257 aaPredicted RBP9.93□□□□□ -0.82
SHQ1-203ENST00000463369 PDE8AO60658 829 aa9.93□□□□□ -0.82
SHQ1-203ENST00000463369 RPS6KA5O75582 802 aa9.93□□□□□ -0.82
SHQ1-203ENST00000463369 URI1O94763 535 aaPredicted RBP9.93□□□□□ -0.82
SHQ1-203ENST00000463369 NECTIN1Q15223 517 aa9.93□□□□□ -0.82
SHQ1-203ENST00000463369 TSGA10IPQ3SY00 556 aa9.93□□□□□ -0.82
SHQ1-203ENST00000463369 AXDND1Q5T1B0 1012 aaPredicted RBP9.93□□□□□ -0.82
SHQ1-203ENST00000463369 ZNF280DQ6N043 979 aa9.93□□□□□ -0.82
SHQ1-203ENST00000463369 JDP2Q8WYK2 163 aa9.93□□□□□ -0.82
SHQ1-203ENST00000463369 PHOX2BQ99453 314 aa9.93□□□□□ -0.82
SHQ1-203ENST00000463369 NAT10Q9H0A0 1025 aaKnown RBP9.93□□□□□ -0.82
SHQ1-203ENST00000463369 CAPN10Q9HC96 672 aa9.93□□□□□ -0.82
SHQ1-203ENST00000463369 ARHGEF10LQ9HCE6 1279 aa9.93□□□□□ -0.82
SHQ1-203ENST00000463369 GPCPD1Q9NPB8 672 aa9.93□□□□□ -0.82
SHQ1-203ENST00000463369 CSF1RP07333 972 aa9.92□□□□□ -0.82
SHQ1-203ENST00000463369 VAC14Q08AM6 782 aa9.92□□□□□ -0.82
SHQ1-203ENST00000463369 LMBR1LQ6UX01 489 aa9.92□□□□□ -0.82
SHQ1-203ENST00000463369 METTL16Q86W50 562 aaKnown RBP9.92□□□□□ -0.82
SHQ1-203ENST00000463369 CEP57L1Q8IYX8 460 aa9.92□□□□□ -0.82
SHQ1-203ENST00000463369 AOPEPQ8N6M6 819 aa9.92□□□□□ -0.82
SHQ1-203ENST00000463369 RUFY2Q8WXA3 655 aa9.92□□□□□ -0.82
SHQ1-203ENST00000463369 EPC1Q9H2F5 836 aa9.92□□□□□ -0.82
SHQ1-203ENST00000463369 MAP3K20Q9NYL2 800 aaKnown RBP9.92□□□□□ -0.82
SHQ1-203ENST00000463369 CFAP45Q9UL16 551 aa9.92□□□□□ -0.82
SHQ1-203ENST00000463369 PARP3Q9Y6F1 533 aa9.92□□□□□ -0.82
SHQ1-203ENST00000463369 EIF3CLB5ME19 914 aaKnown RBP9.92□□□□□ -0.82
SHQ1-203ENST00000463369 FANCGO15287 622 aa9.92□□□□□ -0.82
SHQ1-203ENST00000463369 ZKSCAN1P17029 563 aaPredicted RBP9.92□□□□□ -0.82
SHQ1-203ENST00000463369 RESTQ13127 1097 aa9.92□□□□□ -0.82
SHQ1-203ENST00000463369 SLC10A5Q5PT55 438 aa9.92□□□□□ -0.82
SHQ1-203ENST00000463369 TPTE2Q6XPS3 522 aa9.92□□□□□ -0.82
SHQ1-203ENST00000463369 TMC6Q7Z403 805 aa9.92□□□□□ -0.82
SHQ1-203ENST00000463369 EIF3CQ99613 913 aaKnown RBP9.92□□□□□ -0.82
SHQ1-203ENST00000463369 DEF6Q9H4E7 631 aa9.92□□□□□ -0.82
SHQ1-203ENST00000463369 TOMM22Q9NS69 142 aa9.92□□□□□ -0.82
SHQ1-203ENST00000463369 BSDC1Q9NW68 430 aaPredicted RBP9.92□□□□□ -0.82
SHQ1-203ENST00000463369 LIMD1Q9UGP4 676 aa9.92□□□□□ -0.82
SHQ1-203ENST00000463369 TNRC6CQ9HCJ0 1690 aaKnown RBP9.92□□□□□ -0.82
SHQ1-203ENST00000463369 A0A1B0GUL6 1792 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 H3BQF6 201 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 MAP2K7O14733 419 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 SMC2O95347 1197 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 TNNI2P48788 182 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 ANKRD1Q15327 319 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 ERFEQ4G0M1 354 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 PPP1R18Q6NYC8 613 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 RSRC2Q7L4I2 434 aaKnown RBP9.91□□□□□ -0.82
SHQ1-203ENST00000463369 NBPF5PQ86XG9 351 aaPredicted RBP9.91□□□□□ -0.82
SHQ1-203ENST00000463369 TTLL11Q8NHH1 800 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 CXorf38Q8TB03 319 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 PPM1EQ8WY54 764 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 PARD6BQ9BYG5 372 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 XPO4Q9C0E2 1151 aaKnown RBP9.91□□□□□ -0.82
SHQ1-203ENST00000463369 ALDH8A1Q9H2A2 487 aaPredicted RBP9.91□□□□□ -0.82
SHQ1-203ENST00000463369 CACNA1SQ13698 1873 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 A0A087WWV3 80 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 PRC1O43663 620 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 IFIT2P09913 472 aaKnown RBP9.91□□□□□ -0.82
SHQ1-203ENST00000463369 PSMA5P28066 241 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 RFX5P48382 616 aaPredicted RBP9.91□□□□□ -0.82
SHQ1-203ENST00000463369 CTSWP56202 376 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 CORO7P57737 925 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 MAP3K9P80192 1104 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 JAKMIP3Q5VZ66 844 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 PPP2R2DQ66LE6 453 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 SUGP1Q8IWZ8 645 aaKnown RBP9.91□□□□□ -0.82
SHQ1-203ENST00000463369 RHPN1Q8TCX5 695 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 RABGGTAQ92696 567 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 ZSCAN16Q9H4T2 348 aaPredicted RBP9.91□□□□□ -0.82
SHQ1-203ENST00000463369 RCOR1Q9UKL0 485 aa9.91□□□□□ -0.82
SHQ1-203ENST00000463369 ZBTB12Q9Y330 459 aaPredicted RBP9.91□□□□□ -0.82
SHQ1-203ENST00000463369 POLRMTO00411 1230 aaKnown RBP9.9□□□□□ -0.82
SHQ1-203ENST00000463369 SURF6O75683 361 aaKnown RBP9.9□□□□□ -0.82
SHQ1-203ENST00000463369 APPP05067 770 aa9.9□□□□□ -0.82
SHQ1-203ENST00000463369 SERPINB2P05120 415 aa9.9□□□□□ -0.82
SHQ1-203ENST00000463369 HSD3B2P26439 372 aa9.9□□□□□ -0.82
SHQ1-203ENST00000463369 DNAJA1P31689 397 aaKnown RBP9.9□□□□□ -0.82
SHQ1-203ENST00000463369 MRPL58Q14197 206 aaKnown RBP9.9□□□□□ -0.82
SHQ1-203ENST00000463369 LONRF2Q1L5Z9 754 aa9.9□□□□□ -0.82
SHQ1-203ENST00000463369 SWT1Q5T5J6 900 aaKnown RBP9.9□□□□□ -0.82
SHQ1-203ENST00000463369 CREB3L3Q68CJ9 461 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms