RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 SNX5Q9Y5X3 404 aa6.22□□□□□ -1.41
TRA2B-207ENST00000463328 NPHP3Q7Z494 1330 aa6.22□□□□□ -1.41
TRA2B-207ENST00000463328 CAMTA1Q9Y6Y1 1673 aa6.21□□□□□ -1.41
TRA2B-207ENST00000463328 KLF4O43474 513 aa6.21□□□□□ -1.42
TRA2B-207ENST00000463328 PRPF40AO75400 957 aaKnown RBP6.21□□□□□ -1.42
TRA2B-207ENST00000463328 CCDC175P0C221 793 aa6.21□□□□□ -1.42
TRA2B-207ENST00000463328 COBLL1Q53SF7 1204 aa6.21□□□□□ -1.42
TRA2B-207ENST00000463328 ELOA2Q8IYF1 753 aaPredicted RBP6.21□□□□□ -1.42
TRA2B-207ENST00000463328 FAM174AQ8TBP5 190 aa6.21□□□□□ -1.42
TRA2B-207ENST00000463328 LRRN4Q8WUT4 740 aa6.21□□□□□ -1.42
TRA2B-207ENST00000463328 TRIM6Q9C030 488 aaPredicted RBP6.21□□□□□ -1.42
TRA2B-207ENST00000463328 VPS33BQ9H267 617 aa6.21□□□□□ -1.42
TRA2B-207ENST00000463328 TRPM3Q9HCF6 1732 aaPredicted RBP6.21□□□□□ -1.42
TRA2B-207ENST00000463328 OVOS2A0A0G2JMS6 1433 aa6.21□□□□□ -1.42
TRA2B-207ENST00000463328 RGS12O14924 1447 aa6.21□□□□□ -1.42
TRA2B-207ENST00000463328 TMEM94Q12767 1356 aa6.21□□□□□ -1.42
TRA2B-207ENST00000463328 SPTLC1O15269 473 aa6.21□□□□□ -1.42
TRA2B-207ENST00000463328 CNGA1P29973 690 aa6.21□□□□□ -1.42
TRA2B-207ENST00000463328 ROR1Q01973 937 aa6.21□□□□□ -1.42
TRA2B-207ENST00000463328 PTPN14Q15678 1187 aa6.21□□□□□ -1.42
TRA2B-207ENST00000463328 MTHFSDQ2M296 383 aaKnown RBP6.21□□□□□ -1.42
TRA2B-207ENST00000463328 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.21□□□□□ -1.42
TRA2B-207ENST00000463328 PARP10Q53GL7 1025 aa6.21□□□□□ -1.42
TRA2B-207ENST00000463328 CCDC129Q6ZRS4 1044 aa6.21□□□□□ -1.42
TRA2B-207ENST00000463328 ANKS3Q6ZW76 656 aa6.21□□□□□ -1.42
TRA2B-207ENST00000463328 KRT26Q7Z3Y9 468 aa6.21□□□□□ -1.42
TRA2B-207ENST00000463328 RPAP2Q8IXW5 612 aaPredicted RBP6.21□□□□□ -1.42
TRA2B-207ENST00000463328 HNRNPLLQ8WVV9 542 aaKnown RBP6.21□□□□□ -1.42
TRA2B-207ENST00000463328 GIMAP1Q8WWP7 306 aa6.21□□□□□ -1.42
TRA2B-207ENST00000463328 MED1Q15648 1581 aaPredicted RBP6.2□□□□□ -1.42
TRA2B-207ENST00000463328 ABCC6O95255 1503 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 USP17L5A8MUK1 530 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 TOR1BO14657 336 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 DSG2Q14126 1118 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 TUBB8Q3ZCM7 444 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 AMOTQ4VCS5 1084 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 HSP90B2PQ58FF3 399 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 C1orf122Q6ZSJ8 110 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 KIAA0825Q8IV33 1275 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 ZNF579Q8NAF0 562 aaKnown RBP6.2□□□□□ -1.42
TRA2B-207ENST00000463328 RPGRQ92834 1020 aaKnown RBP6.2□□□□□ -1.42
TRA2B-207ENST00000463328 ZNF396Q96N95 335 aaPredicted RBP6.2□□□□□ -1.42
TRA2B-207ENST00000463328 FEZ1Q99689 392 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 THUMPD2Q9BTF0 503 aaKnown RBP6.2□□□□□ -1.42
TRA2B-207ENST00000463328 AP1M1Q9BXS5 423 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 TMEM260Q9NX78 707 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 FBXO10Q9UK96 956 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 PPP1R9AQ9ULJ8 1098 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 ITM2BQ9Y287 266 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 IKBKGQ9Y6K9 419 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 LMO7Q8WWI1 1683 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 FAM83GA6ND36 823 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 RASSF10A6NK89 507 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 BBOX1O75936 387 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 GCP02774 474 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 UBASH3AP57075 661 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 DPYDQ12882 1025 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 STAG2Q8N3U4 1231 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 STON2Q8WXE9 905 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 TBC1D32Q96NH3 1257 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 GTF2IRD1Q9UHL9 959 aa6.2□□□□□ -1.42
TRA2B-207ENST00000463328 GNAT3A8MTJ3 354 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 FOXO3O43524 673 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 TRIM37O94972 964 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 HNRNPCP07910 306 aaKnown RBP eCLIP6.19□□□□□ -1.42
TRA2B-207ENST00000463328 IDEP14735 1019 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 RAC2P15153 192 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 XBP1P17861 261 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 RPL17P18621 184 aaKnown RBP6.19□□□□□ -1.42
TRA2B-207ENST00000463328 LAMC2Q13753 1193 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 DSC3Q14574 896 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 ERFEQ4G0M1 354 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 CYP26C1Q6V0L0 522 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 CHD1LQ86WJ1 897 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 VPS37DQ86XT2 251 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 ZNF594Q96JF6 807 aaPredicted RBP6.19□□□□□ -1.42
TRA2B-207ENST00000463328 ORAI2Q96SN7 254 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 SMAD5Q99717 465 aaKnown RBP6.19□□□□□ -1.42
TRA2B-207ENST00000463328 CDH19Q9H159 772 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 DCTPP1Q9H773 170 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 UPF2Q9HAU5 1272 aaKnown RBP6.19□□□□□ -1.42
TRA2B-207ENST00000463328 CYLDQ9NQC7 956 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.19□□□□□ -1.42
TRA2B-207ENST00000463328 CEP72Q9P209 647 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 CEP83Q9Y592 693 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 CEMIPQ8WUJ3 1361 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 ADAMTS7Q9UKP4 1686 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 KDM4FA0A1W2PPD8 638 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 HOXB7P09629 217 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 MZF1P28698 734 aaPredicted RBP6.19□□□□□ -1.42
TRA2B-207ENST00000463328 RBM5P52756 815 aaKnown RBP eCLIP6.19□□□□□ -1.42
TRA2B-207ENST00000463328 MLC1Q15049 377 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 PLEKHO1Q53GL0 409 aaPredicted RBP6.19□□□□□ -1.42
TRA2B-207ENST00000463328 BMP2KLQ5H9B9 411 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 EEPD1Q7L9B9 569 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 ANKMY2Q8IV38 441 aa6.19□□□□□ -1.42
TRA2B-207ENST00000463328 ENAHQ8N8S7 591 aaPredicted RBP6.19□□□□□ -1.42
TRA2B-207ENST00000463328 SYMPKQ92797 1274 aaKnown RBP6.19□□□□□ -1.42
TRA2B-207ENST00000463328 UTP6Q9NYH9 597 aaKnown RBP6.19□□□□□ -1.42
TRA2B-207ENST00000463328 ZNF232Q9UNY5 417 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms