RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 RABGAP1Q9Y3P9 1069 aa25.33■■□□□ 1.65
CPSF7-209ENST00000463244 DLL1O00548 723 aa25.32■■□□□ 1.64
CPSF7-209ENST00000463244 CNMDO75829 334 aa25.32■■□□□ 1.64
CPSF7-209ENST00000463244 IDH1O75874 414 aaKnown RBP25.32■■□□□ 1.64
CPSF7-209ENST00000463244 EHD4Q9H223 541 aa25.32■■□□□ 1.64
CPSF7-209ENST00000463244 SERPINB13Q9UIV8 391 aa25.32■■□□□ 1.64
CPSF7-209ENST00000463244 USP17L15C9J2P7 530 aa25.31■■□□□ 1.64
CPSF7-209ENST00000463244 USP17L13C9JLJ4 530 aa25.31■■□□□ 1.64
CPSF7-209ENST00000463244 USP17L11C9JVI0 530 aa25.31■■□□□ 1.64
CPSF7-209ENST00000463244 USP17L18D6R9N7 530 aa25.31■■□□□ 1.64
CPSF7-209ENST00000463244 USP17L22D6RA61 530 aa25.31■■□□□ 1.64
CPSF7-209ENST00000463244 USP17L17D6RBQ6 530 aa25.31■■□□□ 1.64
CPSF7-209ENST00000463244 USP17L19D6RCP7 530 aa25.31■■□□□ 1.64
CPSF7-209ENST00000463244 USP17L20D6RJB6 530 aa25.31■■□□□ 1.64
CPSF7-209ENST00000463244 USP5P45974 858 aa25.31■■□□□ 1.64
CPSF7-209ENST00000463244 USP17L24Q0WX57 530 aa25.31■■□□□ 1.64
CPSF7-209ENST00000463244 DEFB123Q8N688 67 aa25.31■■□□□ 1.64
CPSF7-209ENST00000463244 EAF2Q96CJ1 260 aaPredicted RBP25.31■■□□□ 1.64
CPSF7-209ENST00000463244 FEZ1Q99689 392 aa25.31■■□□□ 1.64
CPSF7-209ENST00000463244 CCDC8Q9H0W5 538 aaPredicted RBP25.31■■□□□ 1.64
CPSF7-209ENST00000463244 USP14P54578 494 aa25.3■■□□□ 1.64
CPSF7-209ENST00000463244 CCNA1P78396 465 aa25.3■■□□□ 1.64
CPSF7-209ENST00000463244 MAP2K5Q13163 448 aa25.3■■□□□ 1.64
CPSF7-209ENST00000463244 ZYXQ15942 572 aaKnown RBP25.3■■□□□ 1.64
CPSF7-209ENST00000463244 MAGEB6Q8N7X4 407 aa25.3■■□□□ 1.64
CPSF7-209ENST00000463244 UBE2OQ9C0C9 1292 aaKnown RBP25.3■■□□□ 1.64
CPSF7-209ENST00000463244 CWC22Q9HCG8 908 aaKnown RBP25.3■■□□□ 1.64
CPSF7-209ENST00000463244 LRRC26Q2I0M4 334 aa25.29■■□□□ 1.64
CPSF7-209ENST00000463244 CATSPERGQ6ZRH7 1159 aa25.29■■□□□ 1.64
CPSF7-209ENST00000463244 EDC3Q96F86 508 aaKnown RBP25.29■■□□□ 1.64
CPSF7-209ENST00000463244 KIAA1683Q9H0B3 1180 aa25.29■■□□□ 1.64
CPSF7-209ENST00000463244 GLRX3O76003 335 aaKnown RBP25.28■■□□□ 1.64
CPSF7-209ENST00000463244 VCAM1P19320 739 aa25.28■■□□□ 1.64
CPSF7-209ENST00000463244 RAB3GAP1Q15042 981 aa25.28■■□□□ 1.64
CPSF7-209ENST00000463244 CERKLQ49MI3 558 aaPredicted RBP25.28■■□□□ 1.64
CPSF7-209ENST00000463244 LBX2Q6XYB7 198 aa25.28■■□□□ 1.64
CPSF7-209ENST00000463244 Q7L0L9 218 aa25.28■■□□□ 1.64
CPSF7-209ENST00000463244 NDUFB9Q9Y6M9 179 aa25.28■■□□□ 1.64
CPSF7-209ENST00000463244 ABCB5Q2M3G0 1257 aa25.27■■□□□ 1.64
CPSF7-209ENST00000463244 TMED8Q6PL24 325 aaPredicted RBP25.27■■□□□ 1.64
CPSF7-209ENST00000463244 TTC6Q86TZ1 520 aa25.27■■□□□ 1.64
CPSF7-209ENST00000463244 ACER1Q8TDN7 264 aa25.27■■□□□ 1.64
CPSF7-209ENST00000463244 ANTXR1Q9H6X2 564 aa25.27■■□□□ 1.64
CPSF7-209ENST00000463244 FLRT1Q9NZU1 646 aa25.27■■□□□ 1.64
CPSF7-209ENST00000463244 SLC15A5A6NIM6 579 aa25.26■■□□□ 1.63
CPSF7-209ENST00000463244 PTPREP23469 700 aa25.26■■□□□ 1.63
CPSF7-209ENST00000463244 MAP3K12Q12852 859 aa25.26■■□□□ 1.63
CPSF7-209ENST00000463244 MFSD14CQ5VZR4 134 aa25.26■■□□□ 1.63
CPSF7-209ENST00000463244 HOXC6P09630 235 aa25.25■■□□□ 1.63
CPSF7-209ENST00000463244 SHMT1P34896 483 aa25.25■■□□□ 1.63
CPSF7-209ENST00000463244 WDR78Q5VTH9 848 aa25.25■■□□□ 1.63
CPSF7-209ENST00000463244 FTSJ3Q8IY81 847 aaKnown RBP25.25■■□□□ 1.63
CPSF7-209ENST00000463244 BTBD7Q9P203 1132 aa25.25■■□□□ 1.63
CPSF7-209ENST00000463244 NAV1Q8NEY1 1877 aa25.25■■□□□ 1.63
CPSF7-209ENST00000463244 SPDYE16A6NNV3 312 aaPredicted RBP25.24■■□□□ 1.63
CPSF7-209ENST00000463244 PLCD1P51178 756 aa25.24■■□□□ 1.63
CPSF7-209ENST00000463244 GRB14Q14449 540 aa25.24■■□□□ 1.63
CPSF7-209ENST00000463244 ITPRIPQ8IWB1 547 aa25.24■■□□□ 1.63
CPSF7-209ENST00000463244 RIOK1Q9BRS2 568 aaKnown RBP25.24■■□□□ 1.63
CPSF7-209ENST00000463244 CABP5Q9NP86 173 aa25.24■■□□□ 1.63
CPSF7-209ENST00000463244 MTMR10Q9NXD2 777 aa25.24■■□□□ 1.63
CPSF7-209ENST00000463244 STXBP5LQ9Y2K9 1186 aa25.24■■□□□ 1.63
CPSF7-209ENST00000463244 IVNS1ABPQ9Y6Y0 642 aa25.24■■□□□ 1.63
CPSF7-209ENST00000463244 RLBP1P12271 317 aa25.23■■□□□ 1.63
CPSF7-209ENST00000463244 MDM2Q00987 491 aaPredicted RBP25.23■■□□□ 1.63
CPSF7-209ENST00000463244 DDX20Q9UHI6 824 aaKnown RBP25.23■■□□□ 1.63
CPSF7-209ENST00000463244 VCANP13611 3396 aa25.23■■□□□ 1.63
CPSF7-209ENST00000463244 EYSQ5T1H1 3165 aa25.23■■□□□ 1.63
CPSF7-209ENST00000463244 MSCO60682 206 aa25.22■■□□□ 1.63
CPSF7-209ENST00000463244 GUCY1A2P33402 732 aa25.22■■□□□ 1.63
CPSF7-209ENST00000463244 SENP6Q9GZR1 1112 aaPredicted RBP25.22■■□□□ 1.63
CPSF7-209ENST00000463244 RPAP3Q9H6T3 665 aaPredicted RBP25.22■■□□□ 1.63
CPSF7-209ENST00000463244 IGHA2P01877 340 aa25.21■■□□□ 1.63
CPSF7-209ENST00000463244 ATP2B2Q01814 1243 aa25.21■■□□□ 1.63
CPSF7-209ENST00000463244 GABPAQ06546 454 aa25.21■■□□□ 1.63
CPSF7-209ENST00000463244 CEP85Q6P2H3 762 aa25.21■■□□□ 1.63
CPSF7-209ENST00000463244 NPLOC4Q8TAT6 608 aa25.21■■□□□ 1.63
CPSF7-209ENST00000463244 LPAR1Q92633 364 aa25.21■■□□□ 1.63
CPSF7-209ENST00000463244 RLFQ13129 1914 aa25.2■■□□□ 1.62
CPSF7-209ENST00000463244 CDH23Q9H251 3354 aa25.2■■□□□ 1.62
CPSF7-209ENST00000463244 AACSQ86V21 672 aa25.2■■□□□ 1.62
CPSF7-209ENST00000463244 ZNF236Q9UL36 1845 aa25.2■■□□□ 1.62
CPSF7-209ENST00000463244 POLR3DP05423 398 aaPredicted RBP25.19■■□□□ 1.62
CPSF7-209ENST00000463244 CNGA1P29973 690 aa25.19■■□□□ 1.62
CPSF7-209ENST00000463244 CYP2C19P33261 490 aa25.19■■□□□ 1.62
CPSF7-209ENST00000463244 SEPT2Q15019 361 aa25.19■■□□□ 1.62
CPSF7-209ENST00000463244 ERC1Q8IUD2 1116 aa25.19■■□□□ 1.62
CPSF7-209ENST00000463244 EXOC6BQ9Y2D4 811 aa25.19■■□□□ 1.62
CPSF7-209ENST00000463244 A0A0G2JMZ2 1700 aa25.18■■□□□ 1.62
CPSF7-209ENST00000463244 MAGEB6P1A0A0J9YX57 407 aa25.18■■□□□ 1.62
CPSF7-209ENST00000463244 DNM1LO00429 736 aa25.18■■□□□ 1.62
CPSF7-209ENST00000463244 TRPV1Q8NER1 839 aa25.18■■□□□ 1.62
CPSF7-209ENST00000463244 A0A1W2PRG0 241 aa25.17■■□□□ 1.62
CPSF7-209ENST00000463244 CYBAP13498 195 aa25.17■■□□□ 1.62
CPSF7-209ENST00000463244 MOV10L1Q9BXT6 1211 aaKnown RBP25.17■■□□□ 1.62
CPSF7-209ENST00000463244 PDE6AP16499 860 aa25.16■■□□□ 1.62
CPSF7-209ENST00000463244 ATN1P54259 1190 aaPredicted RBP25.16■■□□□ 1.62
CPSF7-209ENST00000463244 EVX2Q03828 476 aa25.16■■□□□ 1.62
CPSF7-209ENST00000463244 COG2Q14746 738 aa25.16■■□□□ 1.62
CPSF7-209ENST00000463244 TTF1Q15361 905 aaPredicted RBP25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms