RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 HPSEQ9Y251 543 aa11.74□□□□□ -0.53
MSH5-211ENST00000463144 FOCADQ5VW36 1801 aa11.73□□□□□ -0.53
MSH5-211ENST00000463144 MYH1P12882 1939 aa11.73□□□□□ -0.53
MSH5-211ENST00000463144 ZNF202O95125 648 aa11.73□□□□□ -0.53
MSH5-211ENST00000463144 RASA1P20936 1047 aa11.73□□□□□ -0.53
MSH5-211ENST00000463144 AKAP17AQ02040 695 aaKnown RBP11.73□□□□□ -0.53
MSH5-211ENST00000463144 NPY5RQ15761 445 aa11.73□□□□□ -0.53
MSH5-211ENST00000463144 DOK7Q18PE1 504 aa11.73□□□□□ -0.53
MSH5-211ENST00000463144 EARS2Q5JPH6 523 aaKnown RBP11.73□□□□□ -0.53
MSH5-211ENST00000463144 C11orf57Q6ZUT1 292 aaPredicted RBP11.73□□□□□ -0.53
MSH5-211ENST00000463144 DGKHQ86XP1 1220 aa11.73□□□□□ -0.53
MSH5-211ENST00000463144 MXD3Q9BW11 206 aa11.73□□□□□ -0.53
MSH5-211ENST00000463144 ZC3H12CQ9C0D7 883 aaKnown RBP11.73□□□□□ -0.53
MSH5-211ENST00000463144 CCDC39Q9UFE4 941 aa11.73□□□□□ -0.53
MSH5-211ENST00000463144 DAGLAQ9Y4D2 1042 aa11.73□□□□□ -0.53
MSH5-211ENST00000463144 FLT1P17948 1338 aa11.73□□□□□ -0.53
MSH5-211ENST00000463144 FAM237AA0A1B0GTK4 181 aa11.72□□□□□ -0.53
MSH5-211ENST00000463144 FAM205CA6NFA0 338 aa11.72□□□□□ -0.53
MSH5-211ENST00000463144 ZNF165P49910 485 aa11.72□□□□□ -0.53
MSH5-211ENST00000463144 IQCB1Q15051 598 aa11.72□□□□□ -0.53
MSH5-211ENST00000463144 DPP8Q6V1X1 898 aaPredicted RBP11.72□□□□□ -0.53
MSH5-211ENST00000463144 CERS3Q8IU89 383 aa11.72□□□□□ -0.53
MSH5-211ENST00000463144 CTCFLQ8NI51 663 aaPredicted RBP11.72□□□□□ -0.53
MSH5-211ENST00000463144 ANO8Q9HCE9 1232 aaPredicted RBP11.72□□□□□ -0.53
MSH5-211ENST00000463144 TCP11L1Q9NUJ3 509 aa11.72□□□□□ -0.53
MSH5-211ENST00000463144 PCDHB6Q9Y5E3 794 aa11.72□□□□□ -0.53
MSH5-211ENST00000463144 RGPD3A6NKT7 1758 aaPredicted RBP11.72□□□□□ -0.53
MSH5-211ENST00000463144 RGPD4Q7Z3J3 1758 aa11.72□□□□□ -0.53
MSH5-211ENST00000463144 BAZ2BQ9UIF8 2168 aaKnown RBP11.72□□□□□ -0.53
MSH5-211ENST00000463144 CDK8P49336 464 aa11.72□□□□□ -0.53
MSH5-211ENST00000463144 PLCB2Q00722 1185 aa11.72□□□□□ -0.53
MSH5-211ENST00000463144 QSER1Q2KHR3 1735 aa11.72□□□□□ -0.53
MSH5-211ENST00000463144 C16orf86Q6ZW13 317 aa11.72□□□□□ -0.53
MSH5-211ENST00000463144 ZNF444Q8N0Y2 327 aaPredicted RBP11.72□□□□□ -0.53
MSH5-211ENST00000463144 SNED1Q8TER0 1413 aa11.72□□□□□ -0.53
MSH5-211ENST00000463144 SDF4Q9BRK5 362 aa11.72□□□□□ -0.53
MSH5-211ENST00000463144 ADAMTSL1Q8N6G6 1762 aa11.71□□□□□ -0.53
MSH5-211ENST00000463144 PLCG2P16885 1265 aa11.71□□□□□ -0.53
MSH5-211ENST00000463144 NT5C2P49902 561 aa11.71□□□□□ -0.53
MSH5-211ENST00000463144 GRIN1Q05586 938 aa11.71□□□□□ -0.53
MSH5-211ENST00000463144 NOM1Q5C9Z4 860 aaKnown RBP11.71□□□□□ -0.53
MSH5-211ENST00000463144 RILPL1Q5EBL4 403 aa11.71□□□□□ -0.53
MSH5-211ENST00000463144 RESP18Q5W5W9 173 aa11.71□□□□□ -0.53
MSH5-211ENST00000463144 SLF2Q8IX21 1173 aa11.71□□□□□ -0.53
MSH5-211ENST00000463144 AMOTL1Q8IY63 956 aa11.71□□□□□ -0.53
MSH5-211ENST00000463144 STAG2Q8N3U4 1231 aa11.71□□□□□ -0.53
MSH5-211ENST00000463144 JMYQ8N9B5 988 aa11.71□□□□□ -0.53
MSH5-211ENST00000463144 PNMA1Q8ND90 353 aa11.71□□□□□ -0.53
MSH5-211ENST00000463144 ZNF622Q969S3 477 aaKnown RBP eCLIP11.71□□□□□ -0.539e-12■□□□□ 10.4
MSH5-211ENST00000463144 KAT14Q9H8E8 782 aa11.71□□□□□ -0.53
MSH5-211ENST00000463144 CABP5Q9NP86 173 aa11.71□□□□□ -0.53
MSH5-211ENST00000463144 KIAA1468Q9P260 1216 aa11.71□□□□□ -0.53
MSH5-211ENST00000463144 F8W031 263 aaPredicted RBP11.71□□□□□ -0.54
MSH5-211ENST00000463144 ADAMTS3O15072 1205 aa11.71□□□□□ -0.54
MSH5-211ENST00000463144 CUTAO60888 179 aa11.71□□□□□ -0.54
MSH5-211ENST00000463144 TSPY3P0CV98 308 aa11.71□□□□□ -0.54
MSH5-211ENST00000463144 TSPY8P0CW00 308 aa11.71□□□□□ -0.54
MSH5-211ENST00000463144 STX1AQ16623 288 aa11.71□□□□□ -0.54
MSH5-211ENST00000463144 SLC35G1Q2M3R5 365 aa11.71□□□□□ -0.54
MSH5-211ENST00000463144 TNFRSF25Q93038 417 aa11.71□□□□□ -0.54
MSH5-211ENST00000463144 FBXW7Q969H0 707 aa11.71□□□□□ -0.54
MSH5-211ENST00000463144 FBXO2Q9UK22 296 aaPredicted RBP11.71□□□□□ -0.54
MSH5-211ENST00000463144 ZKSCAN5Q9Y2L8 839 aa11.71□□□□□ -0.54
MSH5-211ENST00000463144 SLX4Q8IY92 1834 aa11.71□□□□□ -0.54
MSH5-211ENST00000463144 XBP1P17861 261 aa11.7□□□□□ -0.54
MSH5-211ENST00000463144 KRT2P35908 639 aa11.7□□□□□ -0.54
MSH5-211ENST00000463144 EZH2Q15910 746 aaKnown RBP11.7□□□□□ -0.54
MSH5-211ENST00000463144 ILDR2Q71H61 639 aa11.7□□□□□ -0.54
MSH5-211ENST00000463144 C2CD5Q86YS7 1000 aa11.7□□□□□ -0.54
MSH5-211ENST00000463144 TMEM47Q9BQJ4 181 aa11.7□□□□□ -0.54
MSH5-211ENST00000463144 KCNQ5Q9NR82 932 aa11.7□□□□□ -0.54
MSH5-211ENST00000463144 MAD2L2Q9UI95 211 aa11.7□□□□□ -0.54
MSH5-211ENST00000463144 SUGT1Q9Y2Z0 365 aa11.7□□□□□ -0.54
MSH5-211ENST00000463144 WNT7AO00755 349 aa11.7□□□□□ -0.54
MSH5-211ENST00000463144 CAVIN2O95810 425 aa11.7□□□□□ -0.54
MSH5-211ENST00000463144 PTMAP06454 111 aaKnown RBP11.7□□□□□ -0.54
MSH5-211ENST00000463144 SCG2P13521 617 aa11.7□□□□□ -0.54
MSH5-211ENST00000463144 ATP2B1P20020 1258 aa11.7□□□□□ -0.54
MSH5-211ENST00000463144 PTPREP23469 700 aa11.7□□□□□ -0.54
MSH5-211ENST00000463144 SYKP43405 635 aa11.7□□□□□ -0.54
MSH5-211ENST00000463144 GRM4Q14833 912 aa11.7□□□□□ -0.54
MSH5-211ENST00000463144 PFKFB3Q16875 520 aaPredicted RBP11.7□□□□□ -0.54
MSH5-211ENST00000463144 SPECC1Q5M775 1068 aa11.7□□□□□ -0.54
MSH5-211ENST00000463144 KRI1Q8N9T8 703 aaKnown RBP11.7□□□□□ -0.54
MSH5-211ENST00000463144 PIBF1Q8WXW3 757 aa11.7□□□□□ -0.54
MSH5-211ENST00000463144 TIGD1Q96MW7 591 aa11.7□□□□□ -0.54
MSH5-211ENST00000463144 KIF5BP33176 963 aa11.69□□□□□ -0.54
MSH5-211ENST00000463144 CCDC178Q5BJE1 867 aa11.69□□□□□ -0.54
MSH5-211ENST00000463144 NEDD1Q8NHV4 660 aa11.69□□□□□ -0.54
MSH5-211ENST00000463144 ZNF830Q96NB3 372 aaPredicted RBP11.69□□□□□ -0.54
MSH5-211ENST00000463144 CAMKK2Q96RR4 588 aa11.69□□□□□ -0.54
MSH5-211ENST00000463144 EYA3Q99504 573 aa11.69□□□□□ -0.54
MSH5-211ENST00000463144 DDX4Q9NQI0 724 aaKnown RBP11.69□□□□□ -0.54
MSH5-211ENST00000463144 ANO10Q9NW15 660 aa11.69□□□□□ -0.54
MSH5-211ENST00000463144 TTF2Q9UNY4 1162 aaKnown RBP11.69□□□□□ -0.54
MSH5-211ENST00000463144 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.69□□□□□ -0.54
MSH5-211ENST00000463144 MSNP26038 577 aaKnown RBP11.69□□□□□ -0.54
MSH5-211ENST00000463144 CHRNA5P30532 468 aa11.69□□□□□ -0.54
MSH5-211ENST00000463144 SCNN1DP51172 638 aa11.69□□□□□ -0.54
MSH5-211ENST00000463144 EN1Q05925 392 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms