RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 ESR2Q92731 530 aa13.95□□□□□ -0.18
CPNE1-221ENST00000462352 MS4A4AQ96JQ5 239 aa13.95□□□□□ -0.18
CPNE1-221ENST00000462352 CNNM2Q9H8M5 875 aa13.95□□□□□ -0.18
CPNE1-221ENST00000462352 KANSL2Q9H9L4 492 aa13.95□□□□□ -0.18
CPNE1-221ENST00000462352 GREB1LQ9C091 1923 aaPredicted RBP13.95□□□□□ -0.18
CPNE1-221ENST00000462352 THSD7BQ9C0I4 1608 aa13.94□□□□□ -0.18
CPNE1-221ENST00000462352 MANSC4A6NHS7 340 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-221ENST00000462352 E7EWF7 191 aa13.94□□□□□ -0.18
CPNE1-221ENST00000462352 KDM4AO75164 1064 aa13.94□□□□□ -0.18
CPNE1-221ENST00000462352 TRDNQ13061 729 aa13.94□□□□□ -0.18
CPNE1-221ENST00000462352 RNF20Q5VTR2 975 aa13.94□□□□□ -0.18
CPNE1-221ENST00000462352 SIAH1Q8IUQ4 282 aa13.94□□□□□ -0.18
CPNE1-221ENST00000462352 ACER1Q8TDN7 264 aa13.94□□□□□ -0.18
CPNE1-221ENST00000462352 USP26Q9BXU7 913 aa13.94□□□□□ -0.18
CPNE1-221ENST00000462352 KRT23Q9C075 422 aa13.94□□□□□ -0.18
CPNE1-221ENST00000462352 CCL15-CCL14A0A0B4J2E2 113 aa13.93□□□□□ -0.18
CPNE1-221ENST00000462352 A0A0G2JLL6 359 aaPredicted RBP13.93□□□□□ -0.18
CPNE1-221ENST00000462352 A0A1W2PRG0 241 aa13.93□□□□□ -0.18
CPNE1-221ENST00000462352 TESPA1A2RU30 521 aaPredicted RBP13.93□□□□□ -0.18
CPNE1-221ENST00000462352 B4E1Z4 1266 aa13.93□□□□□ -0.18
CPNE1-221ENST00000462352 USP17L10C9JJH3 530 aa13.93□□□□□ -0.18
CPNE1-221ENST00000462352 EIF5BO60841 1220 aaKnown RBP13.93□□□□□ -0.18
CPNE1-221ENST00000462352 SEC24BO95487 1268 aa13.93□□□□□ -0.18
CPNE1-221ENST00000462352 CETPP11597 493 aa13.93□□□□□ -0.18
CPNE1-221ENST00000462352 EEF2P13639 858 aaKnown RBP13.93□□□□□ -0.18
CPNE1-221ENST00000462352 HSPA4P34932 840 aa13.93□□□□□ -0.18
CPNE1-221ENST00000462352 NT5C2P49902 561 aa13.93□□□□□ -0.18
CPNE1-221ENST00000462352 BACE1P56817 501 aa13.93□□□□□ -0.18
CPNE1-221ENST00000462352 SREBF2Q12772 1141 aa13.93□□□□□ -0.18
CPNE1-221ENST00000462352 MTMR2Q13614 643 aa13.93□□□□□ -0.18
CPNE1-221ENST00000462352 CCL15Q16663 113 aa13.93□□□□□ -0.18
CPNE1-221ENST00000462352 PRRT2Q7Z6L0 340 aaPredicted RBP13.93□□□□□ -0.18
CPNE1-221ENST00000462352 BRI3BPQ8WY22 251 aa13.93□□□□□ -0.18
CPNE1-221ENST00000462352 CEP95Q96GE4 821 aa13.93□□□□□ -0.18
CPNE1-221ENST00000462352 MTMR4Q9NYA4 1195 aa13.93□□□□□ -0.18
CPNE1-221ENST00000462352 CEP350Q5VT06 3117 aa13.93□□□□□ -0.18
CPNE1-221ENST00000462352 NMT2O60551 498 aa13.92□□□□□ -0.18
CPNE1-221ENST00000462352 ZKSCAN1P17029 563 aaPredicted RBP13.92□□□□□ -0.18
CPNE1-221ENST00000462352 TM4SF4P48230 202 aa13.92□□□□□ -0.18
CPNE1-221ENST00000462352 HMGCS2P54868 508 aa13.92□□□□□ -0.18
CPNE1-221ENST00000462352 INHBEP58166 350 aa13.92□□□□□ -0.18
CPNE1-221ENST00000462352 ATP2B2Q01814 1243 aa13.92□□□□□ -0.18
CPNE1-221ENST00000462352 DGKZQ13574 1117 aa13.92□□□□□ -0.18
CPNE1-221ENST00000462352 MOGSQ13724 837 aa13.92□□□□□ -0.18
CPNE1-221ENST00000462352 TSGA10IPQ3SY00 556 aa13.92□□□□□ -0.18
CPNE1-221ENST00000462352 SH3D19Q5HYK7 790 aa13.92□□□□□ -0.18
CPNE1-221ENST00000462352 RALYLQ86SE5 291 aaKnown RBP13.92□□□□□ -0.18
CPNE1-221ENST00000462352 REM2Q8IYK8 340 aaPredicted RBP13.92□□□□□ -0.18
CPNE1-221ENST00000462352 RASEFQ8IZ41 740 aa13.92□□□□□ -0.18
CPNE1-221ENST00000462352 NCOA7Q8NI08 942 aa13.92□□□□□ -0.18
CPNE1-221ENST00000462352 KCNB2Q92953 911 aa13.92□□□□□ -0.18
CPNE1-221ENST00000462352 FEZ1Q99689 392 aa13.92□□□□□ -0.18
CPNE1-221ENST00000462352 KIAA1683Q9H0B3 1180 aa13.92□□□□□ -0.18
CPNE1-221ENST00000462352 ARHGEF10LQ9HCE6 1279 aa13.92□□□□□ -0.18
CPNE1-221ENST00000462352 IL17RBQ9NRM6 502 aa13.92□□□□□ -0.18
CPNE1-221ENST00000462352 TCP11L1Q9NUJ3 509 aa13.92□□□□□ -0.18
CPNE1-221ENST00000462352 NYAP2Q9P242 653 aa13.92□□□□□ -0.18
CPNE1-221ENST00000462352 C19orf81C9J6K1 198 aa13.91□□□□□ -0.18
CPNE1-221ENST00000462352 ZYXQ15942 572 aaKnown RBP13.91□□□□□ -0.18
CPNE1-221ENST00000462352 PPP4R3BQ5MIZ7 849 aa13.91□□□□□ -0.18
CPNE1-221ENST00000462352 GADL1Q6ZQY3 521 aa13.91□□□□□ -0.18
CPNE1-221ENST00000462352 CYB5R4Q7L1T6 521 aa13.91□□□□□ -0.18
CPNE1-221ENST00000462352 PTPN18Q99952 460 aa13.91□□□□□ -0.18
CPNE1-221ENST00000462352 ZKSCAN3Q9BRR0 538 aa13.91□□□□□ -0.18
CPNE1-221ENST00000462352 SH2D4AQ9H788 454 aa13.91□□□□□ -0.18
CPNE1-221ENST00000462352 ZSWIM5Q9P217 1185 aa13.91□□□□□ -0.18
CPNE1-221ENST00000462352 CLIP2Q9UDT6 1046 aa13.91□□□□□ -0.18
CPNE1-221ENST00000462352 STX8Q9UNK0 236 aa13.91□□□□□ -0.18
CPNE1-221ENST00000462352 TMX2Q9Y320 296 aa13.91□□□□□ -0.18
CPNE1-221ENST00000462352 PTPRFP10586 1907 aa13.9□□□□□ -0.18
CPNE1-221ENST00000462352 BTBD19C9JJ37 291 aa13.9□□□□□ -0.18
CPNE1-221ENST00000462352 IGF2BP3O00425 579 aaKnown RBP eCLIP13.9□□□□□ -0.182e-7■■■■□ 20.3
CPNE1-221ENST00000462352 TTLL1O95922 423 aa13.9□□□□□ -0.18
CPNE1-221ENST00000462352 MCCP23508 829 aa13.9□□□□□ -0.18
CPNE1-221ENST00000462352 NOVP48745 357 aa13.9□□□□□ -0.18
CPNE1-221ENST00000462352 USP14P54578 494 aa13.9□□□□□ -0.18
CPNE1-221ENST00000462352 KRT32Q14532 448 aa13.9□□□□□ -0.18
CPNE1-221ENST00000462352 USP17L2Q6R6M4 530 aa13.9□□□□□ -0.18
CPNE1-221ENST00000462352 FASTKD5Q7L8L6 764 aaKnown RBP13.9□□□□□ -0.18
CPNE1-221ENST00000462352 IQCA1Q86XH1 822 aa13.9□□□□□ -0.18
CPNE1-221ENST00000462352 IFNL1Q8IU54 200 aa13.9□□□□□ -0.18
CPNE1-221ENST00000462352 MB21D2Q8IYB1 491 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-221ENST00000462352 JMYQ8N9B5 988 aa13.9□□□□□ -0.18
CPNE1-221ENST00000462352 PROCA1Q8NCQ7 364 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-221ENST00000462352 MKL1Q969V6 931 aa13.9□□□□□ -0.18
CPNE1-221ENST00000462352 EMILIN3Q9NT22 766 aa13.9□□□□□ -0.18
CPNE1-221ENST00000462352 TMOD4Q9NZQ9 345 aa13.9□□□□□ -0.18
CPNE1-221ENST00000462352 SNX14Q9Y5W7 946 aa13.9□□□□□ -0.18
CPNE1-221ENST00000462352 COL9A3Q14050 684 aaPredicted RBP13.89□□□□□ -0.19
CPNE1-221ENST00000462352 ADCK5Q3MIX3 580 aa13.89□□□□□ -0.19
CPNE1-221ENST00000462352 CCDC178Q5BJE1 867 aa13.89□□□□□ -0.19
CPNE1-221ENST00000462352 RCSD1Q6JBY9 416 aa13.89□□□□□ -0.19
CPNE1-221ENST00000462352 GPAT2Q6NUI2 795 aa13.89□□□□□ -0.19
CPNE1-221ENST00000462352 ANKRD23Q86SG2 305 aa13.89□□□□□ -0.19
CPNE1-221ENST00000462352 LRRC47Q8N1G4 583 aaKnown RBP13.89□□□□□ -0.19
CPNE1-221ENST00000462352 FAM43AQ8N2R8 423 aa13.89□□□□□ -0.19
CPNE1-221ENST00000462352 C12orf42Q96LP6 360 aa13.89□□□□□ -0.19
CPNE1-221ENST00000462352 NEK1Q96PY6 1258 aa13.89□□□□□ -0.19
CPNE1-221ENST00000462352 ZSCAN10Q96SZ4 725 aaPredicted RBP13.89□□□□□ -0.19
CPNE1-221ENST00000462352 VCPKMTQ9H867 229 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms