RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 COPRSQ9NQ92 184 aa18.84■□□□□ 0.61
APP-211ENST00000462267 RAI14Q9P0K7 980 aa18.84■□□□□ 0.61
APP-211ENST00000462267 TACC3Q9Y6A5 838 aa18.84■□□□□ 0.61
APP-211ENST00000462267 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.83■□□□□ 0.6
APP-211ENST00000462267 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.83■□□□□ 0.6
APP-211ENST00000462267 GDF11O95390 407 aa18.83■□□□□ 0.6
APP-211ENST00000462267 UBTFL1P0CB47 393 aaPredicted RBP18.83■□□□□ 0.6
APP-211ENST00000462267 LBX2Q6XYB7 198 aa18.83■□□□□ 0.6
APP-211ENST00000462267 SH3RF3Q8TEJ3 882 aaPredicted RBP18.83■□□□□ 0.6
APP-211ENST00000462267 C12orf42Q96LP6 360 aa18.83■□□□□ 0.6
APP-211ENST00000462267 NOL10Q9BSC4 688 aaKnown RBP18.83■□□□□ 0.6
APP-211ENST00000462267 HMG20BQ9P0W2 317 aa18.83■□□□□ 0.6
APP-211ENST00000462267 PA2G4Q9UQ80 394 aaKnown RBP18.83■□□□□ 0.6
APP-211ENST00000462267 AKAP2Q9Y2D5 859 aa18.83■□□□□ 0.6
APP-211ENST00000462267 A0A1B0GUL7 405 aa18.82■□□□□ 0.6
APP-211ENST00000462267 SEPT4O43236 478 aa18.82■□□□□ 0.6
APP-211ENST00000462267 PLCG2P16885 1265 aa18.82■□□□□ 0.6
APP-211ENST00000462267 DNAJB2P25686 324 aa18.82■□□□□ 0.6
APP-211ENST00000462267 ADCYAP1R1P41586 468 aa18.82■□□□□ 0.6
APP-211ENST00000462267 TLE2Q04725 743 aa18.82■□□□□ 0.6
APP-211ENST00000462267 SHROOM1Q2M3G4 852 aaPredicted RBP18.82■□□□□ 0.6
APP-211ENST00000462267 OLFML2BQ68BL8 750 aa18.82■□□□□ 0.6
APP-211ENST00000462267 TBC1D9Q6ZT07 1266 aa18.82■□□□□ 0.6
APP-211ENST00000462267 SPATA5Q8NB90 893 aa18.82■□□□□ 0.6
APP-211ENST00000462267 ASB2Q96Q27 587 aa18.82■□□□□ 0.6
APP-211ENST00000462267 ZNF576Q9H609 170 aa18.82■□□□□ 0.6
APP-211ENST00000462267 BAG3O95817 575 aa18.81■□□□□ 0.6
APP-211ENST00000462267 CATSPERGQ6ZRH7 1159 aa18.81■□□□□ 0.6
APP-211ENST00000462267 DPP9Q86TI2 863 aa18.81■□□□□ 0.6
APP-211ENST00000462267 HDAC5Q9UQL6 1122 aa18.81■□□□□ 0.6
APP-211ENST00000462267 MYCNP04198 464 aaPredicted RBP18.8■□□□□ 0.6
APP-211ENST00000462267 ITGB8P26012 769 aa18.8■□□□□ 0.6
APP-211ENST00000462267 USP14P54578 494 aa18.8■□□□□ 0.6
APP-211ENST00000462267 EPHB4P54760 987 aa18.8■□□□□ 0.6
APP-211ENST00000462267 MAP3K12Q12852 859 aa18.8■□□□□ 0.6
APP-211ENST00000462267 ADAMTS19Q8TE59 1207 aa18.8■□□□□ 0.6
APP-211ENST00000462267 TGFBRAP1Q8WUH2 860 aa18.8■□□□□ 0.6
APP-211ENST00000462267 BTBD7Q9P203 1132 aa18.8■□□□□ 0.6
APP-211ENST00000462267 THEGQ9P2T0 379 aa18.8■□□□□ 0.6
APP-211ENST00000462267 SIPA1L1O43166 1804 aa18.79■□□□□ 0.6
APP-211ENST00000462267 KIAA0355O15063 1070 aa18.79■□□□□ 0.6
APP-211ENST00000462267 STRNO43815 780 aa18.79■□□□□ 0.6
APP-211ENST00000462267 CLTBP09497 229 aa18.79■□□□□ 0.6
APP-211ENST00000462267 HOXD11P31277 338 aaPredicted RBP18.79■□□□□ 0.6
APP-211ENST00000462267 LRRC41Q15345 812 aa18.79■□□□□ 0.6
APP-211ENST00000462267 AKNAD1Q5T1N1 836 aa18.79■□□□□ 0.6
APP-211ENST00000462267 ANO1Q5XXA6 986 aa18.79■□□□□ 0.6
APP-211ENST00000462267 PI16Q6UXB8 463 aa18.79■□□□□ 0.6
APP-211ENST00000462267 ATF7IPQ6VMQ6 1270 aa18.79■□□□□ 0.6
APP-211ENST00000462267 FERMT2Q96AC1 680 aa18.79■□□□□ 0.6
APP-211ENST00000462267 TIFAQ96CG3 184 aa18.79■□□□□ 0.6
APP-211ENST00000462267 GAS2L1Q99501 681 aaPredicted RBP18.79■□□□□ 0.6
APP-211ENST00000462267 FEZ1Q99689 392 aa18.79■□□□□ 0.6
APP-211ENST00000462267 LRP2BPQ9P2M1 347 aa18.79■□□□□ 0.6
APP-211ENST00000462267 BDP1A6H8Y1 2624 aa18.79■□□□□ 0.6
APP-211ENST00000462267 FLT1P17948 1338 aa18.78■□□□□ 0.6
APP-211ENST00000462267 GH2P01242 217 aa18.78■□□□□ 0.6
APP-211ENST00000462267 RAG1P15918 1043 aa18.78■□□□□ 0.6
APP-211ENST00000462267 PPP4CP60510 307 aa18.78■□□□□ 0.6
APP-211ENST00000462267 MRPS5P82675 430 aaKnown RBP18.78■□□□□ 0.6
APP-211ENST00000462267 FPGSQ05932 587 aa18.78■□□□□ 0.6
APP-211ENST00000462267 MAPKAPK5Q8IW41 473 aa18.78■□□□□ 0.6
APP-211ENST00000462267 UHRF1Q96T88 793 aaPredicted RBP18.78■□□□□ 0.6
APP-211ENST00000462267 AATFQ9NY61 560 aaKnown RBP eCLIP18.78■□□□□ 0.6
APP-211ENST00000462267 PALD1Q9ULE6 856 aa18.78■□□□□ 0.6
APP-211ENST00000462267 HLA-DOAP06340 250 aa18.77■□□□□ 0.6
APP-211ENST00000462267 ADORA2AP29274 412 aa18.77■□□□□ 0.6
APP-211ENST00000462267 TFCP2Q12800 502 aa18.77■□□□□ 0.6
APP-211ENST00000462267 ZYXQ15942 572 aaKnown RBP18.77■□□□□ 0.6
APP-211ENST00000462267 GORABQ5T7V8 394 aa18.77■□□□□ 0.6
APP-211ENST00000462267 SSH1Q8WYL5 1049 aa18.77■□□□□ 0.6
APP-211ENST00000462267 NEUROD6Q96NK8 337 aa18.77■□□□□ 0.6
APP-211ENST00000462267 KIAA1683Q9H0B3 1180 aa18.77■□□□□ 0.6
APP-211ENST00000462267 MRS2Q9HD23 443 aa18.77■□□□□ 0.6
APP-211ENST00000462267 PHF24Q9UPV7 400 aa18.77■□□□□ 0.6
APP-211ENST00000462267 SPDYE16A6NNV3 312 aaPredicted RBP18.76■□□□□ 0.59
APP-211ENST00000462267 VCAM1P19320 739 aa18.76■□□□□ 0.59
APP-211ENST00000462267 ARID4AP29374 1257 aaPredicted RBP18.76■□□□□ 0.59
APP-211ENST00000462267 NAA16Q6N069 864 aaPredicted RBP18.76■□□□□ 0.59
APP-211ENST00000462267 IL27Q8NEV9 243 aa18.76■□□□□ 0.59
APP-211ENST00000462267 PPM1EQ8WY54 764 aa18.76■□□□□ 0.59
APP-211ENST00000462267 C1QTNF1Q9BXJ1 281 aa18.76■□□□□ 0.59
APP-211ENST00000462267 SLC5A4Q9NY91 659 aa18.76■□□□□ 0.59
APP-211ENST00000462267 FAM47AQ5JRC9 791 aa18.75■□□□□ 0.59
APP-211ENST00000462267 TMEM39AQ9NV64 488 aa18.75■□□□□ 0.59
APP-211ENST00000462267 TATDN1Q6P1N9 297 aa18.74■□□□□ 0.59
APP-211ENST00000462267 SHCBP1Q8NEM2 672 aa18.74■□□□□ 0.59
APP-211ENST00000462267 MOV10L1Q9BXT6 1211 aaKnown RBP18.74■□□□□ 0.59
APP-211ENST00000462267 ARIH1Q9Y4X5 557 aaPredicted RBP18.74■□□□□ 0.59
APP-211ENST00000462267 ZNF236Q9UL36 1845 aa18.74■□□□□ 0.59
APP-211ENST00000462267 COBLO75128 1261 aa18.73■□□□□ 0.59
APP-211ENST00000462267 UQCRFS1P1P0C7P4 283 aa18.73■□□□□ 0.59
APP-211ENST00000462267 MCAMP43121 646 aa18.73■□□□□ 0.59
APP-211ENST00000462267 PRAMEF19Q5SWL8 479 aa18.73■□□□□ 0.59
APP-211ENST00000462267 RNF180Q86T96 592 aa18.73■□□□□ 0.59
APP-211ENST00000462267 RPAP3Q9H6T3 665 aaPredicted RBP18.73■□□□□ 0.59
APP-211ENST00000462267 HOXC10Q9NYD6 342 aa18.73■□□□□ 0.59
APP-211ENST00000462267 SAP30BPQ9UHR5 308 aaKnown RBP18.73■□□□□ 0.59
APP-211ENST00000462267 NRBP1Q9UHY1 535 aa18.73■□□□□ 0.59
APP-211ENST00000462267 PQBP1O60828 265 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms