RNA–Protein interactions for RNA: ENST00000461612.1

PRPF4B-202, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-202ENST00000461612 CNNM2Q9H8M5 875 aa6.98□□□□□ -1.29
PRPF4B-202ENST00000461612 KLHL3Q9UH77 587 aa6.98□□□□□ -1.29
PRPF4B-202ENST00000461612 GTF2IRD1Q9UHL9 959 aa6.98□□□□□ -1.29
PRPF4B-202ENST00000461612 LEMD3Q9Y2U8 911 aa6.98□□□□□ -1.29
PRPF4B-202ENST00000461612 IGF2BP3O00425 579 aaKnown RBP eCLIP6.97□□□□□ -1.29
PRPF4B-202ENST00000461612 SLITRK5O94991 958 aa6.97□□□□□ -1.29
PRPF4B-202ENST00000461612 CYP7A1P22680 504 aa6.97□□□□□ -1.29
PRPF4B-202ENST00000461612 CCNFP41002 786 aa6.97□□□□□ -1.29
PRPF4B-202ENST00000461612 LETMD1Q6P1Q0 360 aa6.97□□□□□ -1.29
PRPF4B-202ENST00000461612 ZNF765Q7L2R6 523 aa6.97□□□□□ -1.29
PRPF4B-202ENST00000461612 FAM214BQ7L5A3 538 aa6.97□□□□□ -1.29
PRPF4B-202ENST00000461612 TAB3Q8N5C8 712 aaPredicted RBP6.97□□□□□ -1.29
PRPF4B-202ENST00000461612 ATG4CQ96DT6 458 aa6.97□□□□□ -1.29
PRPF4B-202ENST00000461612 MKNK2Q9HBH9 465 aa6.97□□□□□ -1.29
PRPF4B-202ENST00000461612 PIM2Q9P1W9 311 aa6.97□□□□□ -1.29
PRPF4B-202ENST00000461612 RNF112Q9ULX5 631 aa6.97□□□□□ -1.29
PRPF4B-202ENST00000461612 CEP131Q9UPN4 1083 aa6.97□□□□□ -1.29
PRPF4B-202ENST00000461612 PRR19A6NJB7 356 aa6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 TNFRSF10CO14798 259 aa6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 RGS13O14921 159 aa6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 DNAJA2O60884 412 aa6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 LEFTY1O75610 366 aa6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 EOMESO95936 686 aa6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 NME1P15531 152 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 RAG1P15918 1043 aa6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 ETV3P41162 512 aa6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 GIPRP48546 466 aa6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 EIF6P56537 245 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 ARSHQ5FYA8 562 aa6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 OVOS1Q6IE37 1185 aa6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 INTS5Q6P9B9 1019 aaKnown RBP6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 NLRC3Q7RTR2 1065 aa6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 SHISA5Q8N114 240 aa6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 CPLX3Q8WVH0 158 aa6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 TM9SF2Q99805 663 aa6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 PPT2Q9UMR5 302 aa6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 MAPK8IP1Q9UQF2 711 aa6.96□□□□□ -1.3
PRPF4B-202ENST00000461612 ITGB7P26010 798 aa6.95□□□□□ -1.3
PRPF4B-202ENST00000461612 GBP1P32455 592 aa6.95□□□□□ -1.3
PRPF4B-202ENST00000461612 GRIK1P39086 918 aa6.95□□□□□ -1.3
PRPF4B-202ENST00000461612 FBXW10Q5XX13 1052 aa6.95□□□□□ -1.3
PRPF4B-202ENST00000461612 PHACTR4Q8IZ21 702 aa6.95□□□□□ -1.3
PRPF4B-202ENST00000461612 XAGE3Q8WTP9 111 aa6.95□□□□□ -1.3
PRPF4B-202ENST00000461612 DPH2Q9BQC3 489 aaPredicted RBP6.95□□□□□ -1.3
PRPF4B-202ENST00000461612 KIF21AQ7Z4S6 1674 aa6.95□□□□□ -1.3
PRPF4B-202ENST00000461612 CYP26A1O43174 497 aa6.94□□□□□ -1.3
PRPF4B-202ENST00000461612 SSBP05455 408 aaKnown RBP eCLIP6.94□□□□□ -1.3
PRPF4B-202ENST00000461612 FOSL1P15407 271 aa6.94□□□□□ -1.3
PRPF4B-202ENST00000461612 SFRP5Q5T4F7 317 aa6.94□□□□□ -1.3
PRPF4B-202ENST00000461612 C22orf34Q6ZV56 151 aa6.94□□□□□ -1.3
PRPF4B-202ENST00000461612 DNAJB8Q8NHS0 232 aa6.94□□□□□ -1.3
PRPF4B-202ENST00000461612 PPP1R13LQ8WUF5 828 aa6.94□□□□□ -1.3
PRPF4B-202ENST00000461612 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.94□□□□□ -1.38e-12■□□□□ 9.9
PRPF4B-202ENST00000461612 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.94□□□□□ -1.3
PRPF4B-202ENST00000461612 PRDM5Q9NQX1 630 aaPredicted RBP6.94□□□□□ -1.3
PRPF4B-202ENST00000461612 TPX2Q9ULW0 747 aaKnown RBP6.94□□□□□ -1.3
PRPF4B-202ENST00000461612 ABCC8Q09428 1581 aa6.94□□□□□ -1.3
PRPF4B-202ENST00000461612 WIZO95785 1651 aa6.93□□□□□ -1.3
PRPF4B-202ENST00000461612 IFT140Q96RY7 1462 aa6.93□□□□□ -1.3
PRPF4B-202ENST00000461612 COBLO75128 1261 aa6.93□□□□□ -1.3
PRPF4B-202ENST00000461612 FGRP09769 529 aa6.93□□□□□ -1.3
PRPF4B-202ENST00000461612 DNAJA1P31689 397 aaKnown RBP6.93□□□□□ -1.3
PRPF4B-202ENST00000461612 KIR3DL1P43629 444 aa6.93□□□□□ -1.3
PRPF4B-202ENST00000461612 CDH24Q86UP0 819 aa6.93□□□□□ -1.3
PRPF4B-202ENST00000461612 C19orf47Q8N9M1 422 aaKnown RBP6.93□□□□□ -1.3
PRPF4B-202ENST00000461612 RIN3Q8TB24 985 aa6.93□□□□□ -1.3
PRPF4B-202ENST00000461612 SHDQ96IW2 340 aa6.93□□□□□ -1.3
PRPF4B-202ENST00000461612 HEXIM2Q96MH2 286 aaKnown RBP6.93□□□□□ -1.3
PRPF4B-202ENST00000461612 KIF2CQ99661 725 aa6.93□□□□□ -1.3
PRPF4B-202ENST00000461612 ANTXR1Q9H6X2 564 aa6.93□□□□□ -1.3
PRPF4B-202ENST00000461612 SLC12A7Q9Y666 1083 aa6.93□□□□□ -1.3
PRPF4B-202ENST00000461612 TOP2AP11388 1531 aaKnown RBP6.92□□□□□ -1.3
PRPF4B-202ENST00000461612 TGFB1P01137 390 aa6.92□□□□□ -1.3
PRPF4B-202ENST00000461612 GUCY2CP25092 1073 aa6.92□□□□□ -1.3
PRPF4B-202ENST00000461612 CHMP4BP1P59074 171 aa6.92□□□□□ -1.3
PRPF4B-202ENST00000461612 CCDC81Q6ZN84 652 aa6.92□□□□□ -1.3
PRPF4B-202ENST00000461612 LSRQ86X29 649 aaPredicted RBP6.92□□□□□ -1.3
PRPF4B-202ENST00000461612 BAHD1Q8TBE0 780 aaPredicted RBP6.92□□□□□ -1.3
PRPF4B-202ENST00000461612 URB2Q14146 1524 aaKnown RBP6.91□□□□□ -1.3
PRPF4B-202ENST00000461612 GNAT3A8MTJ3 354 aa6.91□□□□□ -1.3
PRPF4B-202ENST00000461612 ZNF865P0CJ78 1059 aaPredicted RBP6.91□□□□□ -1.3
PRPF4B-202ENST00000461612 CASP7P55210 303 aa6.91□□□□□ -1.3
PRPF4B-202ENST00000461612 OXCT1P55809 520 aa6.91□□□□□ -1.3
PRPF4B-202ENST00000461612 CYB5RLQ6IPT4 315 aa6.91□□□□□ -1.3
PRPF4B-202ENST00000461612 ARHGAP27Q6ZUM4 889 aa6.91□□□□□ -1.3
PRPF4B-202ENST00000461612 MCF2L2Q86YR7 1114 aa6.91□□□□□ -1.3
PRPF4B-202ENST00000461612 RNF141Q8WVD5 230 aa6.91□□□□□ -1.3
PRPF4B-202ENST00000461612 DHRS1Q96LJ7 313 aa6.91□□□□□ -1.3
PRPF4B-202ENST00000461612 FBXL18Q96ME1 805 aa6.91□□□□□ -1.3
PRPF4B-202ENST00000461612 ASPNQ9BXN1 380 aa6.91□□□□□ -1.3
PRPF4B-202ENST00000461612 UBOX5O94941 541 aa6.9□□□□□ -1.3
PRPF4B-202ENST00000461612 RNF4P78317 190 aa6.9□□□□□ -1.3
PRPF4B-202ENST00000461612 SF3A1Q15459 793 aaKnown RBP6.9□□□□□ -1.3
PRPF4B-202ENST00000461612 TNNI3KQ59H18 835 aa6.9□□□□□ -1.3
PRPF4B-202ENST00000461612 NETO1Q8TDF5 533 aa6.9□□□□□ -1.3
PRPF4B-202ENST00000461612 KREMEN1Q96MU8 473 aa6.9□□□□□ -1.3
PRPF4B-202ENST00000461612 SLC9A7Q96T83 725 aa6.9□□□□□ -1.3
PRPF4B-202ENST00000461612 LRRC4CQ9HCJ2 640 aa6.9□□□□□ -1.3
PRPF4B-202ENST00000461612 SNX11Q9Y5W9 270 aa6.9□□□□□ -1.3
PRPF4B-202ENST00000461612 ACRP10323 421 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms