RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 HTR3BO95264 441 aa4.55□□□□□ -1.68
HDAC6-212ENST00000461608 ECEL1O95672 775 aa4.55□□□□□ -1.68
HDAC6-212ENST00000461608 CASP7P55210 303 aa4.55□□□□□ -1.68
HDAC6-212ENST00000461608 CYP27A1Q02318 531 aa4.55□□□□□ -1.68
HDAC6-212ENST00000461608 CCDC144BQ3MJ40 725 aa4.55□□□□□ -1.68
HDAC6-212ENST00000461608 TMEM201Q5SNT2 666 aa4.55□□□□□ -1.68
HDAC6-212ENST00000461608 NUTM2GQ5VZR2 741 aa4.55□□□□□ -1.68
HDAC6-212ENST00000461608 FBXW10Q5XX13 1052 aa4.55□□□□□ -1.68
HDAC6-212ENST00000461608 LILRA6Q6PI73 481 aa4.55□□□□□ -1.68
HDAC6-212ENST00000461608 LRFN4Q6PJG9 635 aa4.55□□□□□ -1.68
HDAC6-212ENST00000461608 CYFIP1Q7L576 1253 aa4.55□□□□□ -1.68
HDAC6-212ENST00000461608 FBXO27Q8NI29 283 aa4.55□□□□□ -1.68
HDAC6-212ENST00000461608 GATA6Q92908 595 aa4.55□□□□□ -1.68
HDAC6-212ENST00000461608 ZSWIM4Q9H7M6 989 aa4.55□□□□□ -1.68
HDAC6-212ENST00000461608 PCDHGC5Q9Y5F6 944 aa4.55□□□□□ -1.68
HDAC6-212ENST00000461608 FAM95CA0A1B0GW59 222 aa4.54□□□□□ -1.68
HDAC6-212ENST00000461608 LOC105371045A0A1W2PR82 267 aa4.54□□□□□ -1.68
HDAC6-212ENST00000461608 PRAMEF27A3QJZ7 478 aa4.54□□□□□ -1.68
HDAC6-212ENST00000461608 KLF4O43474 513 aa4.54□□□□□ -1.68
HDAC6-212ENST00000461608 GUCY2CP25092 1073 aa4.54□□□□□ -1.68
HDAC6-212ENST00000461608 ETFBP38117 255 aa4.54□□□□□ -1.68
HDAC6-212ENST00000461608 CCNFP41002 786 aa4.54□□□□□ -1.68
HDAC6-212ENST00000461608 YARSP54577 528 aaKnown RBP4.54□□□□□ -1.68
HDAC6-212ENST00000461608 FXNQ16595 210 aa4.54□□□□□ -1.68
HDAC6-212ENST00000461608 ZC3H12AQ5D1E8 599 aaKnown RBP4.54□□□□□ -1.68
HDAC6-212ENST00000461608 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.54□□□□□ -1.68
HDAC6-212ENST00000461608 CCDC81Q6ZN84 652 aa4.54□□□□□ -1.68
HDAC6-212ENST00000461608 STK11IPQ8N1F8 1099 aa4.54□□□□□ -1.68
HDAC6-212ENST00000461608 C12orf50Q8NA57 414 aaPredicted RBP4.54□□□□□ -1.68
HDAC6-212ENST00000461608 C2CD4AQ8NCU7 369 aaPredicted RBP4.54□□□□□ -1.68
HDAC6-212ENST00000461608 SMG8Q8ND04 991 aaKnown RBP4.54□□□□□ -1.68
HDAC6-212ENST00000461608 FBLIM1Q8WUP2 373 aa4.54□□□□□ -1.68
HDAC6-212ENST00000461608 TBC1D32Q96NH3 1257 aa4.54□□□□□ -1.68
HDAC6-212ENST00000461608 ZC3H12CQ9C0D7 883 aaKnown RBP4.54□□□□□ -1.68
HDAC6-212ENST00000461608 PICK1Q9NRD5 415 aa4.54□□□□□ -1.68
HDAC6-212ENST00000461608 SLC5A6Q9Y289 635 aa4.54□□□□□ -1.68
HDAC6-212ENST00000461608 POLR3KQ9Y2Y1 108 aaPredicted RBP4.54□□□□□ -1.68
HDAC6-212ENST00000461608 MRVI1Q9Y6F6 885 aa4.54□□□□□ -1.68
HDAC6-212ENST00000461608 FAM170BA6NMN3 283 aa4.53□□□□□ -1.68
HDAC6-212ENST00000461608 PRRG2O14669 202 aa4.53□□□□□ -1.68
HDAC6-212ENST00000461608 TMPRSS2O15393 492 aa4.53□□□□□ -1.68
HDAC6-212ENST00000461608 GRIN3BO60391 1043 aa4.53□□□□□ -1.68
HDAC6-212ENST00000461608 PGRP06401 933 aa4.53□□□□□ -1.68
HDAC6-212ENST00000461608 PLCG1P19174 1290 aa4.53□□□□□ -1.68
HDAC6-212ENST00000461608 ETF1P62495 437 aaKnown RBP4.53□□□□□ -1.68
HDAC6-212ENST00000461608 CLCQ05315 142 aa4.53□□□□□ -1.68
HDAC6-212ENST00000461608 PTPN11Q06124 597 aaPredicted RBP4.53□□□□□ -1.68
HDAC6-212ENST00000461608 RING1Q06587 406 aa4.53□□□□□ -1.68
HDAC6-212ENST00000461608 DDR2Q16832 855 aa4.53□□□□□ -1.68
HDAC6-212ENST00000461608 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
HDAC6-212ENST00000461608 INTS3Q68E01 1043 aaKnown RBP4.53□□□□□ -1.68
HDAC6-212ENST00000461608 RNF214Q8ND24 703 aa4.53□□□□□ -1.68
HDAC6-212ENST00000461608 HNRNPLLQ8WVV9 542 aaKnown RBP4.53□□□□□ -1.68
HDAC6-212ENST00000461608 FAM168AQ92567 244 aa4.53□□□□□ -1.68
HDAC6-212ENST00000461608 FAM84AQ96KN4 292 aa4.53□□□□□ -1.68
HDAC6-212ENST00000461608 WNT10AQ9GZT5 417 aa4.53□□□□□ -1.68
HDAC6-212ENST00000461608 PHAXQ9H814 394 aaKnown RBP4.53□□□□□ -1.68
HDAC6-212ENST00000461608 CRIM1Q9NZV1 1036 aa4.53□□□□□ -1.68
HDAC6-212ENST00000461608 REV1Q9UBZ9 1251 aa4.53□□□□□ -1.68
HDAC6-212ENST00000461608 CDK11AQ9UQ88 783 aaPredicted RBP4.53□□□□□ -1.68
HDAC6-212ENST00000461608 MSRB2Q9Y3D2 182 aa4.53□□□□□ -1.68
HDAC6-212ENST00000461608 NCANO14594 1321 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 TNFRSF10CO14798 259 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 SMAD7O15105 426 aaKnown RBP4.52□□□□□ -1.69
HDAC6-212ENST00000461608 ADH5P11766 374 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 LIG1P18858 919 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 CAP2P40123 477 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 RAP1GAPP47736 663 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 INPP5AQ14642 412 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 ZBTB37Q5TC79 503 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 CDCP2Q5VXM1 449 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 OVOS1Q6IE37 1185 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 ZNF746Q6NUN9 644 aaPredicted RBP4.52□□□□□ -1.69
HDAC6-212ENST00000461608 NLRC3Q7RTR2 1065 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 HID1Q8IV36 788 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 MRPL41Q8IXM3 137 aaKnown RBP4.52□□□□□ -1.69
HDAC6-212ENST00000461608 SLFN12Q8IYM2 578 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 BHLHE22Q8NFJ8 381 aaPredicted RBP4.52□□□□□ -1.69
HDAC6-212ENST00000461608 ZNF507Q8TCN5 953 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 ZNF669Q96BR6 464 aaPredicted RBP4.52□□□□□ -1.69
HDAC6-212ENST00000461608 DEPDC7Q96QD5 511 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 SRPK1Q96SB4 655 aaKnown RBP4.52□□□□□ -1.69
HDAC6-212ENST00000461608 PPP1R16BQ96T49 567 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 CCDC113Q9H0I3 377 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 PIDD1Q9HB75 910 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 LRRC4CQ9HCJ2 640 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 AP4E1Q9UPM8 1137 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 MAPK8IP1Q9UQF2 711 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 ACTL7BQ9Y614 415 aa4.52□□□□□ -1.69
HDAC6-212ENST00000461608 TLDC2A0PJX2 215 aa4.51□□□□□ -1.69
HDAC6-212ENST00000461608 DCDC2CA8MYV0 355 aa4.51□□□□□ -1.69
HDAC6-212ENST00000461608 DYNC1LI2O43237 492 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-212ENST00000461608 SMARCA5O60264 1052 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-212ENST00000461608 CLSTN1O94985 981 aa4.51□□□□□ -1.69
HDAC6-212ENST00000461608 PAPLNO95428 1278 aa4.51□□□□□ -1.69
HDAC6-212ENST00000461608 HMGB1P09429 215 aaKnown RBP4.51□□□□□ -1.69
HDAC6-212ENST00000461608 ZNF865P0CJ78 1059 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-212ENST00000461608 NAT2P11245 290 aa4.51□□□□□ -1.69
HDAC6-212ENST00000461608 NME1P15531 152 aaKnown RBP4.51□□□□□ -1.69
HDAC6-212ENST00000461608 NCLP19338 710 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms