RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 KIF4BQ2VIQ3 1234 aa6.61□□□□□ -1.35
BRCA1-206ENST00000461574 SAMD5Q5TGI4 173 aa6.61□□□□□ -1.35
BRCA1-206ENST00000461574 ZNF34Q8IZ26 560 aa6.61□□□□□ -1.35
BRCA1-206ENST00000461574 DPF2Q92785 391 aa6.61□□□□□ -1.35
BRCA1-206ENST00000461574 SEMA6BQ9H3T3 888 aa6.61□□□□□ -1.35
BRCA1-206ENST00000461574 DBNDD1Q9H9R9 158 aa6.61□□□□□ -1.35
BRCA1-206ENST00000461574 GGA3Q9NZ52 723 aa6.61□□□□□ -1.35
BRCA1-206ENST00000461574 MARK1Q9P0L2 795 aa6.61□□□□□ -1.35
BRCA1-206ENST00000461574 PAPPA2Q9BXP8 1791 aa6.61□□□□□ -1.35
BRCA1-206ENST00000461574 YDJCA8MPS7 323 aa6.6□□□□□ -1.35
BRCA1-206ENST00000461574 PSMD14O00487 310 aa6.6□□□□□ -1.35
BRCA1-206ENST00000461574 HCLS1P14317 486 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-206ENST00000461574 RPS12P25398 132 aaKnown RBP6.6□□□□□ -1.35
BRCA1-206ENST00000461574 GRAPQ13588 217 aa6.6□□□□□ -1.35
BRCA1-206ENST00000461574 HSP90AB3PQ58FF7 597 aa6.6□□□□□ -1.35
BRCA1-206ENST00000461574 TMC4Q7Z404 712 aa6.6□□□□□ -1.35
BRCA1-206ENST00000461574 GRAPLQ8TC17 118 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-206ENST00000461574 ZDHHC1Q8WTX9 485 aa6.6□□□□□ -1.35
BRCA1-206ENST00000461574 KRTAP4-8Q9BYQ9 185 aa6.6□□□□□ -1.35
BRCA1-206ENST00000461574 TRMT112Q9UI30 125 aaKnown RBP6.6□□□□□ -1.35
BRCA1-206ENST00000461574 MKI67P46013 3256 aaKnown RBP6.6□□□□□ -1.35
BRCA1-206ENST00000461574 HTTP42858 3142 aa6.6□□□□□ -1.35
BRCA1-206ENST00000461574 SH3TC1Q8TE82 1336 aa6.59□□□□□ -1.35
BRCA1-206ENST00000461574 MAPK8IP3Q9UPT6 1336 aa6.59□□□□□ -1.35
BRCA1-206ENST00000461574 ECE2O60344 883 aa6.59□□□□□ -1.35
BRCA1-206ENST00000461574 EGFRP00533 1210 aa6.59□□□□□ -1.35
BRCA1-206ENST00000461574 EIF2S2P20042 333 aaKnown RBP6.59□□□□□ -1.35
BRCA1-206ENST00000461574 GATA4P43694 442 aa6.59□□□□□ -1.35
BRCA1-206ENST00000461574 EIF4A1P60842 406 aaKnown RBP6.59□□□□□ -1.35
BRCA1-206ENST00000461574 AIMP1Q12904 312 aaKnown RBP6.59□□□□□ -1.35
BRCA1-206ENST00000461574 RASAL3Q86YV0 1011 aa6.59□□□□□ -1.35
BRCA1-206ENST00000461574 CCER1Q8TC90 406 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-206ENST00000461574 CDCA5Q96FF9 252 aa6.59□□□□□ -1.35
BRCA1-206ENST00000461574 CSRNP1Q96S65 589 aa6.59□□□□□ -1.35
BRCA1-206ENST00000461574 EYA3Q99504 573 aa6.59□□□□□ -1.35
BRCA1-206ENST00000461574 THUMPD2Q9BTF0 503 aaKnown RBP6.59□□□□□ -1.35
BRCA1-206ENST00000461574 SCHIP1Q9P0W5 487 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-206ENST00000461574 PSME4Q14997 1843 aa6.59□□□□□ -1.35
BRCA1-206ENST00000461574 SCN9AQ15858 1988 aa6.58□□□□□ -1.36
BRCA1-206ENST00000461574 ELOA3CA0A087WX78 387 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-206ENST00000461574 ELOA3DA6NLF2 546 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-206ENST00000461574 TBC1D8O95759 1140 aa6.58□□□□□ -1.36
BRCA1-206ENST00000461574 SPATA31C1P0DKV0 1188 aa6.58□□□□□ -1.36
BRCA1-206ENST00000461574 SOX11P35716 441 aa6.58□□□□□ -1.36
BRCA1-206ENST00000461574 LAMC2Q13753 1193 aa6.58□□□□□ -1.36
BRCA1-206ENST00000461574 ELOA3BQ3SY89 546 aa6.58□□□□□ -1.36
BRCA1-206ENST00000461574 SLC10A5Q5PT55 438 aa6.58□□□□□ -1.36
BRCA1-206ENST00000461574 ANGEL2Q5VTE6 544 aaKnown RBP6.58□□□□□ -1.36
BRCA1-206ENST00000461574 LRRC69Q6ZNQ3 347 aa6.58□□□□□ -1.36
BRCA1-206ENST00000461574 SYT9Q86SS6 491 aa6.58□□□□□ -1.36
BRCA1-206ENST00000461574 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.58□□□□□ -1.36
BRCA1-206ENST00000461574 ELOA3Q8NG57 546 aa6.58□□□□□ -1.36
BRCA1-206ENST00000461574 ZNF296Q8WUU4 475 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-206ENST00000461574 ZNF428Q96B54 188 aa6.58□□□□□ -1.36
BRCA1-206ENST00000461574 MDFIQ99750 246 aa6.58□□□□□ -1.36
BRCA1-206ENST00000461574 ZC3H12CQ9C0D7 883 aaKnown RBP6.58□□□□□ -1.36
BRCA1-206ENST00000461574 TSPYL4Q9UJ04 414 aa6.58□□□□□ -1.36
BRCA1-206ENST00000461574 BACH1O14867 736 aa6.57□□□□□ -1.36
BRCA1-206ENST00000461574 ANXA1P04083 346 aa6.57□□□□□ -1.36
BRCA1-206ENST00000461574 PRKCSHP14314 528 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-206ENST00000461574 NF2P35240 595 aa6.57□□□□□ -1.36
BRCA1-206ENST00000461574 FKBP1BP68106 108 aa6.57□□□□□ -1.36
BRCA1-206ENST00000461574 GTF2IP78347 998 aa6.57□□□□□ -1.36
BRCA1-206ENST00000461574 SREBF2Q12772 1141 aa6.57□□□□□ -1.36
BRCA1-206ENST00000461574 EML3Q32P44 896 aa6.57□□□□□ -1.36
BRCA1-206ENST00000461574 FBXO46Q6PJ61 603 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-206ENST00000461574 NLRP10Q86W26 655 aa6.57□□□□□ -1.36
BRCA1-206ENST00000461574 ZNF358Q9NW07 568 aa6.57□□□□□ -1.36
BRCA1-206ENST00000461574 SPEF2Q9C093 1822 aa6.57□□□□□ -1.36
BRCA1-206ENST00000461574 RBBP6Q7Z6E9 1792 aaKnown RBP6.57□□□□□ -1.36
BRCA1-206ENST00000461574 ASTN2O75129 1339 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-206ENST00000461574 FKTNO75072 461 aa6.56□□□□□ -1.36
BRCA1-206ENST00000461574 UFL1O94874 794 aa6.56□□□□□ -1.36
BRCA1-206ENST00000461574 SKIP12755 728 aa6.56□□□□□ -1.36
BRCA1-206ENST00000461574 ALAS2P22557 587 aa6.56□□□□□ -1.36
BRCA1-206ENST00000461574 PPP2R1AP30153 589 aa6.56□□□□□ -1.36
BRCA1-206ENST00000461574 GPSM2P81274 684 aa6.56□□□□□ -1.36
BRCA1-206ENST00000461574 TCIRG1Q13488 830 aa6.56□□□□□ -1.36
BRCA1-206ENST00000461574 TEAD4Q15561 434 aa6.56□□□□□ -1.36
BRCA1-206ENST00000461574 HABP4Q5JVS0 413 aaKnown RBP6.56□□□□□ -1.36
BRCA1-206ENST00000461574 TBCELQ5QJ74 424 aa6.56□□□□□ -1.36
BRCA1-206ENST00000461574 COPS6Q7L5N1 327 aa6.56□□□□□ -1.36
BRCA1-206ENST00000461574 XAGE3Q8WTP9 111 aa6.56□□□□□ -1.36
BRCA1-206ENST00000461574 CELF1Q92879 486 aaKnown RBP6.56□□□□□ -1.36
BRCA1-206ENST00000461574 ANKIB1Q9P2G1 1089 aa6.56□□□□□ -1.36
BRCA1-206ENST00000461574 NOD1Q9Y239 953 aa6.56□□□□□ -1.36
BRCA1-206ENST00000461574 RTL9Q8NET4 1388 aa6.56□□□□□ -1.36
BRCA1-206ENST00000461574 PITPNM2Q9BZ72 1349 aa6.55□□□□□ -1.36
BRCA1-206ENST00000461574 UBE2Q2LH0YL09 131 aa6.55□□□□□ -1.36
BRCA1-206ENST00000461574 EML1O00423 815 aa6.55□□□□□ -1.36
BRCA1-206ENST00000461574 NOS2P35228 1153 aa6.55□□□□□ -1.36
BRCA1-206ENST00000461574 EPHA4P54764 986 aa6.55□□□□□ -1.36
BRCA1-206ENST00000461574 SFSWAPQ12872 951 aaKnown RBP6.55□□□□□ -1.36
BRCA1-206ENST00000461574 NFE2L2Q16236 605 aa6.55□□□□□ -1.36
BRCA1-206ENST00000461574 PROSER3Q2NL68 480 aa6.55□□□□□ -1.36
BRCA1-206ENST00000461574 ZMYM1Q5SVZ6 1142 aa6.55□□□□□ -1.36
BRCA1-206ENST00000461574 SH3PXD2AQ5TCZ1 1133 aa6.55□□□□□ -1.36
BRCA1-206ENST00000461574 MOB2Q70IA6 237 aa6.55□□□□□ -1.36
BRCA1-206ENST00000461574 SLC9A9Q8IVB4 645 aa6.55□□□□□ -1.36
BRCA1-206ENST00000461574 TBC1D16Q8TBP0 767 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms