RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 GINM1Q9NU53 330 aa18.71■□□□□ 0.59
NUP50-213ENST00000461437 SLC4A4Q9Y6R1 1079 aa18.71■□□□□ 0.59
NUP50-213ENST00000461437 INHAP05111 366 aa18.7■□□□□ 0.58
NUP50-213ENST00000461437 UBE3CQ15386 1083 aa18.7■□□□□ 0.58
NUP50-213ENST00000461437 Q3C1V9 767 aa18.7■□□□□ 0.58
NUP50-213ENST00000461437 STK11IPQ8N1F8 1099 aa18.7■□□□□ 0.58
NUP50-213ENST00000461437 COA7Q96BR5 231 aa18.7■□□□□ 0.58
NUP50-213ENST00000461437 RNF208Q9H0X6 261 aa18.7■□□□□ 0.58
NUP50-213ENST00000461437 CABP5Q9NP86 173 aa18.7■□□□□ 0.58
NUP50-213ENST00000461437 RBPJLQ9UBG7 517 aa18.7■□□□□ 0.58
NUP50-213ENST00000461437 RLFQ13129 1914 aa18.7■□□□□ 0.58
NUP50-213ENST00000461437 PARP14Q460N5 1801 aa18.7■□□□□ 0.58
NUP50-213ENST00000461437 A0A1W2PRG0 241 aa18.69■□□□□ 0.58
NUP50-213ENST00000461437 AKR1B1P15121 316 aa18.69■□□□□ 0.58
NUP50-213ENST00000461437 TRIM32Q13049 653 aa18.69■□□□□ 0.58
NUP50-213ENST00000461437 SLAIN1Q8ND83 568 aa18.69■□□□□ 0.58
NUP50-213ENST00000461437 MORF4L1Q9UBU8 362 aa18.69■□□□□ 0.58
NUP50-213ENST00000461437 USP17L12C9JPN9 530 aa18.68■□□□□ 0.58
NUP50-213ENST00000461437 USP17L21D6R901 530 aa18.68■□□□□ 0.58
NUP50-213ENST00000461437 VCAM1P19320 739 aa18.68■□□□□ 0.58
NUP50-213ENST00000461437 KIAA1755Q5JYT7 1200 aa18.68■□□□□ 0.58
NUP50-213ENST00000461437 OSBP2Q969R2 916 aa18.68■□□□□ 0.58
NUP50-213ENST00000461437 C12orf42Q96LP6 360 aa18.68■□□□□ 0.58
NUP50-213ENST00000461437 PORCNQ9H237 461 aa18.68■□□□□ 0.58
NUP50-213ENST00000461437 COL11A1P12107 1806 aaPredicted RBP18.67■□□□□ 0.58
NUP50-213ENST00000461437 CNMDO75829 334 aa18.67■□□□□ 0.58
NUP50-213ENST00000461437 UBXN2AP68543 259 aa18.67■□□□□ 0.58
NUP50-213ENST00000461437 IRF5Q13568 498 aa18.67■□□□□ 0.58
NUP50-213ENST00000461437 ZSCAN25Q6NSZ9 544 aa18.67■□□□□ 0.58
NUP50-213ENST00000461437 KBTBD3Q8NAB2 608 aa18.67■□□□□ 0.58
NUP50-213ENST00000461437 ATP8A2Q9NTI2 1148 aa18.67■□□□□ 0.58
NUP50-213ENST00000461437 GJD2Q9UKL4 321 aa18.67■□□□□ 0.58
NUP50-213ENST00000461437 M0R2C6 588 aa18.66■□□□□ 0.58
NUP50-213ENST00000461437 CYP2B6P20813 491 aa18.66■□□□□ 0.58
NUP50-213ENST00000461437 CDK8P49336 464 aa18.66■□□□□ 0.58
NUP50-213ENST00000461437 ERVK-9P63128 1117 aa18.66■□□□□ 0.58
NUP50-213ENST00000461437 ERVK-24P63145 666 aa18.66■□□□□ 0.58
NUP50-213ENST00000461437 C12orf60Q5U649 245 aa18.66■□□□□ 0.58
NUP50-213ENST00000461437 CTR9Q6PD62 1173 aa18.66■□□□□ 0.58
NUP50-213ENST00000461437 GPRC5AQ8NFJ5 357 aa18.66■□□□□ 0.58
NUP50-213ENST00000461437 PI4K2BQ8TCG2 481 aa18.66■□□□□ 0.58
NUP50-213ENST00000461437 GPATCH3Q96I76 525 aa18.66■□□□□ 0.58
NUP50-213ENST00000461437 STRBPQ96SI9 672 aaKnown RBP18.66■□□□□ 0.58
NUP50-213ENST00000461437 KIAA1683Q9H0B3 1180 aa18.66■□□□□ 0.58
NUP50-213ENST00000461437 RPAP3Q9H6T3 665 aaPredicted RBP18.66■□□□□ 0.58
NUP50-213ENST00000461437 ALPK3Q96L96 1907 aa18.65■□□□□ 0.58
NUP50-213ENST00000461437 GREB1LQ9C091 1923 aaPredicted RBP18.65■□□□□ 0.58
NUP50-213ENST00000461437 MYH4Q9Y623 1939 aa18.65■□□□□ 0.58
NUP50-213ENST00000461437 USP17L15C9J2P7 530 aa18.65■□□□□ 0.58
NUP50-213ENST00000461437 USP17L13C9JLJ4 530 aa18.65■□□□□ 0.58
NUP50-213ENST00000461437 USP17L11C9JVI0 530 aa18.65■□□□□ 0.58
NUP50-213ENST00000461437 USP17L18D6R9N7 530 aa18.65■□□□□ 0.58
NUP50-213ENST00000461437 USP17L22D6RA61 530 aa18.65■□□□□ 0.58
NUP50-213ENST00000461437 USP17L17D6RBQ6 530 aa18.65■□□□□ 0.58
NUP50-213ENST00000461437 USP17L19D6RCP7 530 aa18.65■□□□□ 0.58
NUP50-213ENST00000461437 USP17L20D6RJB6 530 aa18.65■□□□□ 0.58
NUP50-213ENST00000461437 USP17L24Q0WX57 530 aa18.65■□□□□ 0.58
NUP50-213ENST00000461437 CATSPERGQ6ZRH7 1159 aa18.65■□□□□ 0.58
NUP50-213ENST00000461437 SEC62Q99442 399 aaKnown RBP18.65■□□□□ 0.58
NUP50-213ENST00000461437 RNF113AO15541 343 aaKnown RBP18.64■□□□□ 0.57
NUP50-213ENST00000461437 GJB1P08034 283 aa18.64■□□□□ 0.57
NUP50-213ENST00000461437 GJA8P48165 433 aa18.64■□□□□ 0.57
NUP50-213ENST00000461437 USP14P54578 494 aa18.64■□□□□ 0.57
NUP50-213ENST00000461437 SIAH1Q8IUQ4 282 aa18.64■□□□□ 0.57
NUP50-213ENST00000461437 PXYLP1Q8TE99 480 aa18.64■□□□□ 0.57
NUP50-213ENST00000461437 U2AF1L4Q8WU68 220 aaKnown RBP18.64■□□□□ 0.57
NUP50-213ENST00000461437 TRIB2Q92519 343 aa18.64■□□□□ 0.57
NUP50-213ENST00000461437 DEFB118Q96PH6 123 aa18.64■□□□□ 0.57
NUP50-213ENST00000461437 EPB41L4AQ9HCS5 686 aaPredicted RBP18.64■□□□□ 0.57
NUP50-213ENST00000461437 BTBD7Q9P203 1132 aa18.64■□□□□ 0.57
NUP50-213ENST00000461437 SWAP70Q9UH65 585 aa18.64■□□□□ 0.57
NUP50-213ENST00000461437 A0A0G2JMZ2 1700 aa18.63■□□□□ 0.57
NUP50-213ENST00000461437 SPDYE16A6NNV3 312 aaPredicted RBP18.63■□□□□ 0.57
NUP50-213ENST00000461437 GSG1L2A8MUP6 293 aa18.63■□□□□ 0.57
NUP50-213ENST00000461437 ANKRD45Q5TZF3 282 aa18.63■□□□□ 0.57
NUP50-213ENST00000461437 SAMD1Q6SPF0 538 aaPredicted RBP18.63■□□□□ 0.57
NUP50-213ENST00000461437 TMEM179Q6ZVK1 233 aa18.63■□□□□ 0.57
NUP50-213ENST00000461437 C16orf86Q6ZW13 317 aa18.63■□□□□ 0.57
NUP50-213ENST00000461437 GPR142Q7Z601 462 aa18.63■□□□□ 0.57
NUP50-213ENST00000461437 SPICE1Q8N0Z3 855 aa18.63■□□□□ 0.57
NUP50-213ENST00000461437 APPBP2Q92624 585 aa18.63■□□□□ 0.57
NUP50-213ENST00000461437 CEP290O15078 2479 aa18.63■□□□□ 0.57
NUP50-213ENST00000461437 MINDY4BA8MYZ0 360 aa18.62■□□□□ 0.57
NUP50-213ENST00000461437 GPAA1O43292 621 aa18.62■□□□□ 0.57
NUP50-213ENST00000461437 ATP2B2Q01814 1243 aa18.62■□□□□ 0.57
NUP50-213ENST00000461437 ICA1Q05084 483 aa18.62■□□□□ 0.57
NUP50-213ENST00000461437 CCL14Q16627 93 aa18.62■□□□□ 0.57
NUP50-213ENST00000461437 WDR78Q5VTH9 848 aa18.62■□□□□ 0.57
NUP50-213ENST00000461437 GCC1Q96CN9 775 aa18.62■□□□□ 0.57
NUP50-213ENST00000461437 ZNFX1Q9P2E3 1918 aaKnown RBP18.62■□□□□ 0.57
NUP50-213ENST00000461437 FRMPD3Q5JV73 1810 aa18.61■□□□□ 0.57
NUP50-213ENST00000461437 TTC41PQ6P2S7 1318 aa18.61■□□□□ 0.57
NUP50-213ENST00000461437 SALL3Q9BXA9 1300 aa18.61■□□□□ 0.57
NUP50-213ENST00000461437 MX1P20591 662 aa18.61■□□□□ 0.57
NUP50-213ENST00000461437 CCAR1Q8IX12 1150 aaKnown RBP18.61■□□□□ 0.57
NUP50-213ENST00000461437 AMOTL1Q8IY63 956 aa18.61■□□□□ 0.57
NUP50-213ENST00000461437 DDRGK1Q96HY6 314 aa18.61■□□□□ 0.57
NUP50-213ENST00000461437 FSD1Q9BTV5 496 aa18.61■□□□□ 0.57
NUP50-213ENST00000461437 TANGO6Q9C0B7 1094 aa18.61■□□□□ 0.57
NUP50-213ENST00000461437 SGPL1O95470 568 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms