RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 AGTPBP1Q9UPW5 1226 aa21.88■■□□□ 1.09
DDR1-241ENST00000460944 RASA1P20936 1047 aa21.87■■□□□ 1.09
DDR1-241ENST00000460944 GUCY1A2P33402 732 aa21.87■■□□□ 1.09
DDR1-241ENST00000460944 PABPC4Q13310 644 aaKnown RBP eCLIP21.87■■□□□ 1.09
DDR1-241ENST00000460944 PARK7Q99497 189 aaKnown RBP21.87■■□□□ 1.09
DDR1-241ENST00000460944 DSCC1Q9BVC3 393 aa21.87■■□□□ 1.09
DDR1-241ENST00000460944 SLC45A1Q9Y2W3 748 aa21.87■■□□□ 1.09
DDR1-241ENST00000460944 GPR25O00155 361 aa21.86■■□□□ 1.09
DDR1-241ENST00000460944 PRDM1O75626 825 aa21.86■■□□□ 1.09
DDR1-241ENST00000460944 USP14P54578 494 aa21.86■■□□□ 1.09
DDR1-241ENST00000460944 ICA1Q05084 483 aa21.86■■□□□ 1.09
DDR1-241ENST00000460944 CTDSPL2Q05D32 466 aa21.86■■□□□ 1.09
DDR1-241ENST00000460944 NOM1Q5C9Z4 860 aaKnown RBP21.86■■□□□ 1.09
DDR1-241ENST00000460944 IFFO2Q5TF58 517 aa21.86■■□□□ 1.09
DDR1-241ENST00000460944 GPAT2Q6NUI2 795 aa21.86■■□□□ 1.09
DDR1-241ENST00000460944 USP17L2Q6R6M4 530 aa21.86■■□□□ 1.09
DDR1-241ENST00000460944 ARHGEF10LQ9HCE6 1279 aa21.86■■□□□ 1.09
DDR1-241ENST00000460944 ANAPC4Q9UJX5 808 aa21.86■■□□□ 1.09
DDR1-241ENST00000460944 PNMA3Q9UL41 463 aa21.86■■□□□ 1.09
DDR1-241ENST00000460944 GREB1LQ9C091 1923 aaPredicted RBP21.85■■□□□ 1.09
DDR1-241ENST00000460944 ZYXQ15942 572 aaKnown RBP21.85■■□□□ 1.09
DDR1-241ENST00000460944 SH2D4AQ9H788 454 aa21.85■■□□□ 1.09
DDR1-241ENST00000460944 KANSL2Q9H9L4 492 aa21.85■■□□□ 1.09
DDR1-241ENST00000460944 LAMA4Q16363 1823 aa21.85■■□□□ 1.09
DDR1-241ENST00000460944 ACER1Q8TDN7 264 aa21.84■■□□□ 1.09
DDR1-241ENST00000460944 KIAA1683Q9H0B3 1180 aa21.84■■□□□ 1.09
DDR1-241ENST00000460944 R3HDMLQ9H3Y0 253 aa21.84■■□□□ 1.09
DDR1-241ENST00000460944 CTNNA3Q9UI47 895 aa21.84■■□□□ 1.09
DDR1-241ENST00000460944 SGSM2O43147 1006 aa21.83■■□□□ 1.09
DDR1-241ENST00000460944 TLR2O60603 784 aa21.83■■□□□ 1.09
DDR1-241ENST00000460944 FKTNO75072 461 aa21.83■■□□□ 1.09
DDR1-241ENST00000460944 TSPY3P0CV98 308 aa21.83■■□□□ 1.09
DDR1-241ENST00000460944 TSPY8P0CW00 308 aa21.83■■□□□ 1.09
DDR1-241ENST00000460944 OSBPP22059 807 aa21.83■■□□□ 1.09
DDR1-241ENST00000460944 HAND2P61296 217 aa21.83■■□□□ 1.09
DDR1-241ENST00000460944 ATP2B2Q01814 1243 aa21.83■■□□□ 1.09
DDR1-241ENST00000460944 DGKZQ13574 1117 aa21.83■■□□□ 1.09
DDR1-241ENST00000460944 TREML2Q5T2D2 321 aa21.83■■□□□ 1.09
DDR1-241ENST00000460944 CASC1Q6TDU7 716 aa21.83■■□□□ 1.09
DDR1-241ENST00000460944 ZNF296Q8WUU4 475 aaPredicted RBP21.83■■□□□ 1.09
DDR1-241ENST00000460944 IL25Q9H293 177 aa21.83■■□□□ 1.09
DDR1-241ENST00000460944 TOMM22Q9NS69 142 aa21.83■■□□□ 1.09
DDR1-241ENST00000460944 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.83■■□□□ 1.09
DDR1-241ENST00000460944 ZNF213O14771 459 aa21.82■■□□□ 1.08
DDR1-241ENST00000460944 CLEC10AQ8IUN9 316 aa21.82■■□□□ 1.08
DDR1-241ENST00000460944 SMCR8Q8TEV9 937 aaPredicted RBP21.82■■□□□ 1.08
DDR1-241ENST00000460944 C12orf42Q96LP6 360 aa21.82■■□□□ 1.08
DDR1-241ENST00000460944 RNF41Q9H4P4 317 aaPredicted RBP21.82■■□□□ 1.08
DDR1-241ENST00000460944 MYH4Q9Y623 1939 aa21.81■■□□□ 1.08
DDR1-241ENST00000460944 TSPY2A6NKD2 308 aa21.81■■□□□ 1.08
DDR1-241ENST00000460944 ORC4O43929 436 aa21.81■■□□□ 1.08
DDR1-241ENST00000460944 CYP2C8P10632 490 aa21.81■■□□□ 1.08
DDR1-241ENST00000460944 PCP11498 1178 aaKnown RBP21.81■■□□□ 1.08
DDR1-241ENST00000460944 IRX3P78415 501 aaPredicted RBP21.81■■□□□ 1.08
DDR1-241ENST00000460944 IMMTQ16891 758 aaKnown RBP21.81■■□□□ 1.08
DDR1-241ENST00000460944 EMILIN3Q9NT22 766 aa21.81■■□□□ 1.08
DDR1-241ENST00000460944 PLIN4Q96Q06 1357 aa21.8■■□□□ 1.08
DDR1-241ENST00000460944 A0A1W2PRG0 241 aa21.8■■□□□ 1.08
DDR1-241ENST00000460944 CDC45O75419 566 aa21.8■■□□□ 1.08
DDR1-241ENST00000460944 EEF2P13639 858 aaKnown RBP21.8■■□□□ 1.08
DDR1-241ENST00000460944 TFAP4Q01664 338 aa21.8■■□□□ 1.08
DDR1-241ENST00000460944 SP3Q02447 781 aa21.8■■□□□ 1.08
DDR1-241ENST00000460944 KIAA1211Q6ZU35 1233 aa21.8■■□□□ 1.08
DDR1-241ENST00000460944 NEDD1Q8NHV4 660 aa21.8■■□□□ 1.08
DDR1-241ENST00000460944 TMX2Q9Y320 296 aa21.8■■□□□ 1.08
DDR1-241ENST00000460944 RANBP6O60518 1105 aaKnown RBP21.79■■□□□ 1.08
DDR1-241ENST00000460944 FAM47AQ5JRC9 791 aa21.79■■□□□ 1.08
DDR1-241ENST00000460944 RRP12Q5JTH9 1297 aaKnown RBP21.79■■□□□ 1.08
DDR1-241ENST00000460944 PPP4R3BQ5MIZ7 849 aa21.79■■□□□ 1.08
DDR1-241ENST00000460944 AKNAD1Q5T1N1 836 aa21.79■■□□□ 1.08
DDR1-241ENST00000460944 COL13A1Q5TAT6 717 aaPredicted RBP21.79■■□□□ 1.08
DDR1-241ENST00000460944 MFSD6Q6ZSS7 791 aa21.79■■□□□ 1.08
DDR1-241ENST00000460944 STAG1Q8WVM7 1258 aa21.79■■□□□ 1.08
DDR1-241ENST00000460944 ERO1AQ96HE7 468 aa21.79■■□□□ 1.08
DDR1-241ENST00000460944 ESYT1Q9BSJ8 1104 aa21.79■■□□□ 1.08
DDR1-241ENST00000460944 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.79■■□□□ 1.08
DDR1-241ENST00000460944 CPA4Q9UI42 421 aa21.79■■□□□ 1.08
DDR1-241ENST00000460944 FGRP09769 529 aa21.78■■□□□ 1.08
DDR1-241ENST00000460944 VCAM1P19320 739 aa21.78■■□□□ 1.08
DDR1-241ENST00000460944 HOXA7P31268 230 aaPredicted RBP21.78■■□□□ 1.08
DDR1-241ENST00000460944 LPAR1Q92633 364 aa21.78■■□□□ 1.08
DDR1-241ENST00000460944 ASCC2Q9H1I8 757 aaPredicted RBP21.78■■□□□ 1.08
DDR1-241ENST00000460944 GOPCQ9HD26 462 aa21.78■■□□□ 1.08
DDR1-241ENST00000460944 NYAP2Q9P242 653 aa21.78■■□□□ 1.08
DDR1-241ENST00000460944 U3KPZ7 1027 aaPredicted RBP21.78■■□□□ 1.08
DDR1-241ENST00000460944 ADGRA2Q96PE1 1338 aa21.78■■□□□ 1.08
DDR1-241ENST00000460944 IGKV6D-41A0A0C4DH26 115 aa21.77■■□□□ 1.08
DDR1-241ENST00000460944 USP17L15C9J2P7 530 aa21.77■■□□□ 1.08
DDR1-241ENST00000460944 USP17L13C9JLJ4 530 aa21.77■■□□□ 1.08
DDR1-241ENST00000460944 USP17L11C9JVI0 530 aa21.77■■□□□ 1.08
DDR1-241ENST00000460944 USP17L18D6R9N7 530 aa21.77■■□□□ 1.08
DDR1-241ENST00000460944 USP17L22D6RA61 530 aa21.77■■□□□ 1.08
DDR1-241ENST00000460944 USP17L17D6RBQ6 530 aa21.77■■□□□ 1.08
DDR1-241ENST00000460944 USP17L19D6RCP7 530 aa21.77■■□□□ 1.08
DDR1-241ENST00000460944 USP17L20D6RJB6 530 aa21.77■■□□□ 1.08
DDR1-241ENST00000460944 USP17L24Q0WX57 530 aa21.77■■□□□ 1.08
DDR1-241ENST00000460944 C17orf99Q6UX52 265 aa21.77■■□□□ 1.08
DDR1-241ENST00000460944 SIAH1Q8IUQ4 282 aa21.77■■□□□ 1.08
DDR1-241ENST00000460944 TBC1D10CQ8IV04 446 aa21.77■■□□□ 1.08
DDR1-241ENST00000460944 CEP95Q96GE4 821 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms