RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 PDE4AP27815 886 aa11.4□□□□□ -0.58
COL6A2-207ENST00000460886 ADD2P35612 726 aa11.4□□□□□ -0.58
COL6A2-207ENST00000460886 DYNLL1P63167 89 aaKnown RBP11.4□□□□□ -0.58
COL6A2-207ENST00000460886 MTMR2Q13614 643 aa11.4□□□□□ -0.58
COL6A2-207ENST00000460886 SLFNL1Q499Z3 407 aa11.4□□□□□ -0.58
COL6A2-207ENST00000460886 MAP3K21Q5TCX8 1036 aa11.4□□□□□ -0.58
COL6A2-207ENST00000460886 TATDN1Q6P1N9 297 aa11.4□□□□□ -0.58
COL6A2-207ENST00000460886 CENPQQ7L2Z9 268 aaPredicted RBP11.4□□□□□ -0.58
COL6A2-207ENST00000460886 MAPKAPK5Q8IW41 473 aa11.4□□□□□ -0.58
COL6A2-207ENST00000460886 KBTBD3Q8NAB2 608 aa11.4□□□□□ -0.58
COL6A2-207ENST00000460886 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.4□□□□□ -0.58
COL6A2-207ENST00000460886 PALD1Q9ULE6 856 aa11.4□□□□□ -0.58
COL6A2-207ENST00000460886 ZBTB21Q9ULJ3 1066 aa11.4□□□□□ -0.58
COL6A2-207ENST00000460886 RPTORQ8N122 1335 aa11.39□□□□□ -0.59
COL6A2-207ENST00000460886 TCRBV5S4A2TA0A5A2 114 aa11.39□□□□□ -0.59
COL6A2-207ENST00000460886 USP17L10C9JJH3 530 aa11.39□□□□□ -0.59
COL6A2-207ENST00000460886 CHGBP05060 677 aa11.39□□□□□ -0.59
COL6A2-207ENST00000460886 XRCC5P13010 732 aaKnown RBP11.39□□□□□ -0.59
COL6A2-207ENST00000460886 ZSCAN25Q6NSZ9 544 aa11.39□□□□□ -0.59
COL6A2-207ENST00000460886 C12orf42Q96LP6 360 aa11.39□□□□□ -0.59
COL6A2-207ENST00000460886 EHD4Q9H223 541 aa11.39□□□□□ -0.59
COL6A2-207ENST00000460886 MAGEB6P1A0A0J9YX57 407 aa11.38□□□□□ -0.59
COL6A2-207ENST00000460886 TFRCP02786 760 aaKnown RBP11.38□□□□□ -0.59
COL6A2-207ENST00000460886 MNX1P50219 401 aaPredicted RBP11.38□□□□□ -0.59
COL6A2-207ENST00000460886 HERVK_113P62684 666 aa11.38□□□□□ -0.59
COL6A2-207ENST00000460886 IRX3P78415 501 aaPredicted RBP11.38□□□□□ -0.59
COL6A2-207ENST00000460886 UBE3CQ15386 1083 aa11.38□□□□□ -0.59
COL6A2-207ENST00000460886 SHROOM1Q2M3G4 852 aaPredicted RBP11.38□□□□□ -0.59
COL6A2-207ENST00000460886 POTEEQ6S8J3 1075 aa11.38□□□□□ -0.59
COL6A2-207ENST00000460886 CRACR2BQ8N4Y2 399 aaPredicted RBP11.38□□□□□ -0.59
COL6A2-207ENST00000460886 GTF3C2Q8WUA4 911 aaPredicted RBP11.38□□□□□ -0.59
COL6A2-207ENST00000460886 SOCS4Q8WXH5 440 aa11.38□□□□□ -0.59
COL6A2-207ENST00000460886 USP6NLQ92738 828 aa11.38□□□□□ -0.59
COL6A2-207ENST00000460886 P2RX7Q99572 595 aaKnown RBP11.38□□□□□ -0.59
COL6A2-207ENST00000460886 FSD1Q9BTV5 496 aa11.38□□□□□ -0.59
COL6A2-207ENST00000460886 OSBPL3Q9H4L5 887 aa11.38□□□□□ -0.59
COL6A2-207ENST00000460886 TXNRD2Q9NNW7 524 aa11.38□□□□□ -0.59
COL6A2-207ENST00000460886 EMILIN3Q9NT22 766 aa11.38□□□□□ -0.59
COL6A2-207ENST00000460886 TMOD4Q9NZQ9 345 aa11.38□□□□□ -0.59
COL6A2-207ENST00000460886 RBPJLQ9UBG7 517 aa11.38□□□□□ -0.59
COL6A2-207ENST00000460886 TRIM6-TRIM34B2RNG4 842 aa11.37□□□□□ -0.59
COL6A2-207ENST00000460886 RNF113AO15541 343 aaKnown RBP11.37□□□□□ -0.59
COL6A2-207ENST00000460886 EVI5O60447 810 aa11.37□□□□□ -0.59
COL6A2-207ENST00000460886 GDF11O95390 407 aa11.37□□□□□ -0.59
COL6A2-207ENST00000460886 HLA-DOAP06340 250 aa11.37□□□□□ -0.59
COL6A2-207ENST00000460886 MAPK4P31152 587 aa11.37□□□□□ -0.59
COL6A2-207ENST00000460886 ERICH6BQ5W0A0 696 aa11.37□□□□□ -0.59
COL6A2-207ENST00000460886 NECAB2Q7Z6G3 386 aa11.37□□□□□ -0.59
COL6A2-207ENST00000460886 GPRC5AQ8NFJ5 357 aa11.37□□□□□ -0.59
COL6A2-207ENST00000460886 TRIB2Q92519 343 aa11.37□□□□□ -0.59
COL6A2-207ENST00000460886 EVI5LQ96CN4 794 aa11.37□□□□□ -0.59
COL6A2-207ENST00000460886 PAWRQ96IZ0 340 aaKnown RBP11.37□□□□□ -0.59
COL6A2-207ENST00000460886 RIOK1Q9BRS2 568 aaKnown RBP11.37□□□□□ -0.59
COL6A2-207ENST00000460886 HMX1Q9NP08 348 aaPredicted RBP11.37□□□□□ -0.59
COL6A2-207ENST00000460886 OGDHLQ9ULD0 1010 aa11.37□□□□□ -0.59
COL6A2-207ENST00000460886 FRMPD3Q5JV73 1810 aa11.37□□□□□ -0.59
COL6A2-207ENST00000460886 MYH7P12883 1935 aa11.37□□□□□ -0.59
COL6A2-207ENST00000460886 NAV1Q8NEY1 1877 aa11.36□□□□□ -0.59
COL6A2-207ENST00000460886 ZFYP08048 801 aaPredicted RBP11.36□□□□□ -0.59
COL6A2-207ENST00000460886 USP5P45974 858 aa11.36□□□□□ -0.59
COL6A2-207ENST00000460886 ERVK-9P63128 1117 aa11.36□□□□□ -0.59
COL6A2-207ENST00000460886 ERVK-24P63145 666 aa11.36□□□□□ -0.59
COL6A2-207ENST00000460886 TRIM32Q13049 653 aa11.36□□□□□ -0.59
COL6A2-207ENST00000460886 LRRFIP1Q32MZ4 808 aaKnown RBP11.36□□□□□ -0.59
COL6A2-207ENST00000460886 MORN1Q5T089 497 aa11.36□□□□□ -0.59
COL6A2-207ENST00000460886 USP17L2Q6R6M4 530 aa11.36□□□□□ -0.59
COL6A2-207ENST00000460886 LBX2Q6XYB7 198 aa11.36□□□□□ -0.59
COL6A2-207ENST00000460886 TRMT44Q8IYL2 757 aaKnown RBP11.36□□□□□ -0.59
COL6A2-207ENST00000460886 LCORLQ8N3X6 602 aa11.36□□□□□ -0.59
COL6A2-207ENST00000460886 DIS3LQ8TF46 1054 aaKnown RBP11.36□□□□□ -0.59
COL6A2-207ENST00000460886 RILPL2Q969X0 211 aa11.36□□□□□ -0.59
COL6A2-207ENST00000460886 NUDT12Q9BQG2 462 aa11.36□□□□□ -0.59
COL6A2-207ENST00000460886 TRIM34Q9BYJ4 488 aa11.36□□□□□ -0.59
COL6A2-207ENST00000460886 PUS7LQ9H0K6 701 aaKnown RBP11.36□□□□□ -0.59
COL6A2-207ENST00000460886 ARMT1Q9H993 441 aa11.36□□□□□ -0.59
COL6A2-207ENST00000460886 PPP4R2Q9NY27 417 aa11.36□□□□□ -0.59
COL6A2-207ENST00000460886 SERPINB13Q9UIV8 391 aa11.36□□□□□ -0.59
COL6A2-207ENST00000460886 TAOK2Q9UL54 1235 aa11.36□□□□□ -0.59
COL6A2-207ENST00000460886 MBD4O95243 580 aa11.35□□□□□ -0.59
COL6A2-207ENST00000460886 GH2P01242 217 aa11.35□□□□□ -0.59
COL6A2-207ENST00000460886 BMP8BP34820 402 aa11.35□□□□□ -0.59
COL6A2-207ENST00000460886 Q3C1V9 767 aa11.35□□□□□ -0.59
COL6A2-207ENST00000460886 SKAP1Q86WV1 359 aa11.35□□□□□ -0.59
COL6A2-207ENST00000460886 APPBP2Q92624 585 aa11.35□□□□□ -0.59
COL6A2-207ENST00000460886 OSBP2Q969R2 916 aa11.35□□□□□ -0.59
COL6A2-207ENST00000460886 CRNKL1Q9BZJ0 848 aaKnown RBP11.35□□□□□ -0.59
COL6A2-207ENST00000460886 NBPF3Q9H094 633 aa11.35□□□□□ -0.59
COL6A2-207ENST00000460886 KIAA1683Q9H0B3 1180 aa11.35□□□□□ -0.59
COL6A2-207ENST00000460886 PORCNQ9H237 461 aa11.35□□□□□ -0.59
COL6A2-207ENST00000460886 SAP30BPQ9UHR5 308 aaKnown RBP11.35□□□□□ -0.59
COL6A2-207ENST00000460886 RLFQ13129 1914 aa11.35□□□□□ -0.59
COL6A2-207ENST00000460886 ZNF236Q9UL36 1845 aa11.35□□□□□ -0.59
COL6A2-207ENST00000460886 A0A0G2JMZ2 1700 aa11.35□□□□□ -0.59
COL6A2-207ENST00000460886 COL6A3P12111 3177 aa11.34□□□□□ -0.59
COL6A2-207ENST00000460886 PEX10O60683 326 aa11.34□□□□□ -0.59
COL6A2-207ENST00000460886 CNMDO75829 334 aa11.34□□□□□ -0.59
COL6A2-207ENST00000460886 PRKAR2AP13861 404 aaKnown RBP11.34□□□□□ -0.59
COL6A2-207ENST00000460886 SHMT1P34896 483 aa11.34□□□□□ -0.59
COL6A2-207ENST00000460886 GABPAQ06546 454 aa11.34□□□□□ -0.59
COL6A2-207ENST00000460886 TTC22Q5TAA0 569 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms