RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 PCNX4Q63HM2 1172 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 CCDC81Q6ZN84 652 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 ISL2Q96A47 359 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 GPATCH3Q96I76 525 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 KRTAP4-11Q9BYQ6 195 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 SLC5A6Q9Y289 635 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 KLF4O43474 513 aa4.26□□□□□ -1.73
HPS3-203ENST00000460822 PAGE1O75459 146 aa4.26□□□□□ -1.73
HPS3-203ENST00000460822 TFE3P19532 575 aaPredicted RBP4.26□□□□□ -1.73
HPS3-203ENST00000460822 HSD3B2P26439 372 aa4.26□□□□□ -1.73
HPS3-203ENST00000460822 LMNB2Q03252 620 aa4.26□□□□□ -1.73
HPS3-203ENST00000460822 C12orf40Q86WS4 652 aa4.26□□□□□ -1.73
HPS3-203ENST00000460822 TOP6BLQ8N6T0 577 aa4.26□□□□□ -1.73
HPS3-203ENST00000460822 NETO1Q8TDF5 533 aa4.26□□□□□ -1.73
HPS3-203ENST00000460822 MKL1Q969V6 931 aa4.26□□□□□ -1.73
HPS3-203ENST00000460822 MISP3Q96FF7 219 aa4.26□□□□□ -1.73
HPS3-203ENST00000460822 SNTG2Q9NY99 539 aa4.26□□□□□ -1.73
HPS3-203ENST00000460822 SIRPGQ9P1W8 387 aa4.26□□□□□ -1.73
HPS3-203ENST00000460822 PPT2Q9UMR5 302 aa4.26□□□□□ -1.73
HPS3-203ENST00000460822 FANCGO15287 622 aa4.25□□□□□ -1.73
HPS3-203ENST00000460822 NEFMP07197 916 aa4.25□□□□□ -1.73
HPS3-203ENST00000460822 RASA3Q14644 834 aa4.25□□□□□ -1.73
HPS3-203ENST00000460822 SEZ6Q53EL9 994 aa4.25□□□□□ -1.73
HPS3-203ENST00000460822 MPRIPQ6WCQ1 1025 aa4.25□□□□□ -1.73
HPS3-203ENST00000460822 AGMOQ6ZNB7 445 aa4.25□□□□□ -1.73
HPS3-203ENST00000460822 FAM196AQ6ZSG2 479 aa4.25□□□□□ -1.73
HPS3-203ENST00000460822 HDXQ7Z353 690 aa4.25□□□□□ -1.73
HPS3-203ENST00000460822 ABI1Q8IZP0 508 aa4.25□□□□□ -1.73
HPS3-203ENST00000460822 ZNF507Q8TCN5 953 aa4.25□□□□□ -1.73
HPS3-203ENST00000460822 DEPDC7Q96QD5 511 aa4.25□□□□□ -1.73
HPS3-203ENST00000460822 SRRTQ9BXP5 876 aaKnown RBP4.25□□□□□ -1.73
HPS3-203ENST00000460822 PRKAG3Q9UGI9 489 aa4.25□□□□□ -1.73
HPS3-203ENST00000460822 GTF2IRD1Q9UHL9 959 aa4.25□□□□□ -1.73
HPS3-203ENST00000460822 ADGRE2Q9UHX3 823 aa4.25□□□□□ -1.73
HPS3-203ENST00000460822 R3HCC1Q9Y3T6 440 aaKnown RBP4.25□□□□□ -1.73
HPS3-203ENST00000460822 TLR3O15455 904 aaKnown RBP4.25□□□□□ -1.73
HPS3-203ENST00000460822 BNC2Q6ZN30 1099 aaPredicted RBP4.25□□□□□ -1.73
HPS3-203ENST00000460822 FBXO27Q8NI29 283 aa4.25□□□□□ -1.73
HPS3-203ENST00000460822 NKD1Q969G9 470 aa4.25□□□□□ -1.73
HPS3-203ENST00000460822 SHDQ96IW2 340 aa4.25□□□□□ -1.73
HPS3-203ENST00000460822 DUSP23Q9BVJ7 150 aa4.25□□□□□ -1.73
HPS3-203ENST00000460822 TMEM265A0A087WTH1 108 aa4.24□□□□□ -1.73
HPS3-203ENST00000460822 PRAMEF27A3QJZ7 478 aa4.24□□□□□ -1.73
HPS3-203ENST00000460822 FAM221BA6H8Z2 402 aa4.24□□□□□ -1.73
HPS3-203ENST00000460822 SMAD7O15105 426 aaKnown RBP4.24□□□□□ -1.73
HPS3-203ENST00000460822 LEFTY1O75610 366 aa4.24□□□□□ -1.73
HPS3-203ENST00000460822 CLSTN1O94985 981 aa4.24□□□□□ -1.73
HPS3-203ENST00000460822 IFI16Q16666 785 aaKnown RBP4.24□□□□□ -1.73
HPS3-203ENST00000460822 SLITRK4Q8IW52 837 aa4.24□□□□□ -1.73
HPS3-203ENST00000460822 FAM169BQ8N8A8 192 aa4.24□□□□□ -1.73
HPS3-203ENST00000460822 FAM181AQ8N9Y4 354 aa4.24□□□□□ -1.73
HPS3-203ENST00000460822 RNPC3Q96LT9 517 aaKnown RBP4.24□□□□□ -1.73
HPS3-203ENST00000460822 MKNK2Q9HBH9 465 aa4.24□□□□□ -1.73
HPS3-203ENST00000460822 ENPP3O14638 875 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 F13A1P00488 732 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 MCM4P33991 863 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 RPS26P62854 115 aaKnown RBP4.23□□□□□ -1.73
HPS3-203ENST00000460822 PLCL1Q15111 1095 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 PTPROQ16827 1216 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 ZBTB37Q5TC79 503 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 FBXW10Q5XX13 1052 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 PLD6Q8N2A8 252 aaKnown RBP4.23□□□□□ -1.73
HPS3-203ENST00000460822 CELF2-AS1Q8N7Q2 184 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 FERD3LQ96RJ6 166 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 PRDM10Q9NQV6 1147 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 CACNA2D2Q9NY47 1150 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 VAV3Q9UKW4 847 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 PCDHB5Q9Y5E4 795 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 SNCAIPQ9Y6H5 919 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 GNAT3A8MTJ3 354 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 ITIH2P19823 946 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 ETF1P62495 437 aaKnown RBP4.23□□□□□ -1.73
HPS3-203ENST00000460822 TNNI3KQ59H18 835 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 RASIP1Q5U651 963 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 POU5F2Q8N7G0 328 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 BCL7CQ8WUZ0 217 aaPredicted RBP4.23□□□□□ -1.73
HPS3-203ENST00000460822 GATAD2BQ8WXI9 593 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 JARID2Q92833 1246 aaPredicted RBP4.23□□□□□ -1.73
HPS3-203ENST00000460822 HRASLS5Q96KN8 279 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 MIR1-1HGQ9H1L0 117 aa4.23□□□□□ -1.73
HPS3-203ENST00000460822 PAK6Q9NQU5 681 aaPredicted RBP4.23□□□□□ -1.73
HPS3-203ENST00000460822 hCG_2014768A0A024R1R8 64 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 CEACAM5P06731 702 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 EIF6P56537 245 aaKnown RBP4.22□□□□□ -1.73
HPS3-203ENST00000460822 PRKCQQ04759 706 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 BNIP3Q12983 259 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 SEPT6Q14141 434 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 AOC3Q16853 763 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 CWF19L2Q2TBE0 894 aaKnown RBP4.22□□□□□ -1.73
HPS3-203ENST00000460822 RNF187Q5TA31 235 aaPredicted RBP4.22□□□□□ -1.73
HPS3-203ENST00000460822 CHMP4AQ9BY43 222 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 LRRC3Q9BY71 257 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 FAM221AA4D161 298 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 BIN1O00499 593 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 RAB11FIP3O75154 756 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 LRIG2O94898 1065 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 CHMP4BP1P59074 171 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 MPP2Q14168 576 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 DDR2Q16832 855 aa4.22□□□□□ -1.73
HPS3-203ENST00000460822 WIPI1Q5MNZ9 446 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms