RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 PRPHP41219 470 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 RABGGTAQ92696 567 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 RPS6KC1Q96S38 1066 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 RASSF4Q9H2L5 321 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 ZBTB40Q9NUA8 1239 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 FBXO40Q9UH90 709 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 SRPRBQ9Y5M8 271 aaKnown RBP7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 PPEF1O14829 653 aaPredicted RBP7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 CCDC15Q0P6D6 951 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 MCM6Q14566 821 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 TEX11Q8IYF3 940 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 IBTKQ9P2D0 1353 aaPredicted RBP7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 PUF60Q9UHX1 559 aaKnown RBP7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 ONECUT3O60422 494 aaPredicted RBP7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 CAVIN2O95810 425 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 GNA11P29992 359 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 AMPD2Q01433 879 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 CTR9Q6PD62 1173 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 LZTS2Q9BRK4 669 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 PRDM4Q9UKN5 801 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 CYP7A1P22680 504 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 XPAP23025 273 aaPredicted RBP7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 SYT10Q6XYQ8 523 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 TBC1D5Q92609 795 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 MASTLQ96GX5 879 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 PARK7Q99497 189 aaKnown RBP7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 MIS12Q9H081 205 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 PIDD1Q9HB75 910 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 TMEM63CQ9P1W3 806 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 PLCH1Q4KWH8 1693 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 CAPN2P17655 700 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 PDE1AP54750 535 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 ATP2B3Q16720 1220 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 TXNRD1Q16881 649 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 TTC31Q49AM3 519 aaPredicted RBP7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 PLEKHM2Q8IWE5 1019 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 CEP112Q8N8E3 955 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 URGCPQ8TCY9 931 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 RIOK1Q9BRS2 568 aaKnown RBP7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 BOLA2Q9H3K6 86 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 STRCP1A6NGW2 1772 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 GOLGA6L10A0A0M3HER8 536 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 IRS4O14654 1257 aaPredicted RBP7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 NDC80O14777 642 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 IFI16Q16666 785 aaKnown RBP7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 LINS1Q8NG48 757 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 RAB3IL1Q8TBN0 382 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 MARF1Q9Y4F3 1742 aaKnown RBP7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 CA12O43570 354 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 PPFIA3O75145 1194 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 GADD45BO75293 160 aaPredicted RBP7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 CAPN15O75808 1086 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 MCM3P25205 808 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 NT5C2P49902 561 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 CCT2P78371 535 aaKnown RBP7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 KLHL10Q6JEL2 608 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 OTUD6AQ7L8S5 288 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 ZBTB8OSQ8IWT0 167 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 AOPEPQ8N6M6 819 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 FAN1Q9Y2M0 1017 aa7□□□□□ -1.29
HLA-DQA1-205ENST00000460633 CARMIL3Q8ND23 1372 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 MAP3K15Q6ZN16 1313 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 GOLGA6L7A0A1B0GV03 622 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 PDE8AO60658 829 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 EIF4A1P60842 406 aaKnown RBP6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 MUM1L1Q5H9M0 696 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 ADALQ6DHV7 355 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 HAUS6Q7Z4H7 955 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 NDUFAF2Q8N183 169 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 MICALL1Q8N3F8 863 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 MRPL50Q8N5N7 158 aaKnown RBP6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 SKA1Q96BD8 255 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 PTPREP23469 700 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 PAX3P23760 479 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 MAP2K1Q02750 393 aaPredicted RBP6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 PLCB4Q15147 1175 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 FAM43BQ6ZT52 329 aaPredicted RBP6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 ANTXR1Q9H6X2 564 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 MLXIPQ9HAP2 919 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 VPS18Q9P253 973 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 NARFQ9UHQ1 456 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 LTN1O94822 1766 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 GOLGA6L9A6NEM1 432 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 STX10O60499 249 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 OATP04181 439 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 FCGRTP55899 365 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 FLIIQ13045 1269 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 BBS5Q8N3I7 341 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 CDHR1Q96JP9 859 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 NCAPGQ9BPX3 1015 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 PAGR1Q9BTK6 254 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 METTL22Q9BUU2 404 aaPredicted RBP6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 MSRAQ9UJ68 235 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 RGPD1P0DJD0 1748 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 HOXC6P09630 235 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 ELF2Q15723 593 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 CCDC89Q8N998 374 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 GAS2L1Q99501 681 aaPredicted RBP6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 NRBP2Q9NSY0 501 aa6.99□□□□□ -1.29
HLA-DQA1-205ENST00000460633 TAX1BP1Q86VP1 789 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms