RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 SMC5Q8IY18 1101 aa19.81■□□□□ 0.76
SHANK2-213ENST00000460048 ACER1Q8TDN7 264 aa19.81■□□□□ 0.76
SHANK2-213ENST00000460048 DDRGK1Q96HY6 314 aa19.81■□□□□ 0.76
SHANK2-213ENST00000460048 SUPT16HQ9Y5B9 1047 aaKnown RBP19.81■□□□□ 0.76
SHANK2-213ENST00000460048 POTEFA5A3E0 1075 aa19.8■□□□□ 0.76
SHANK2-213ENST00000460048 GPAA1O43292 621 aa19.8■□□□□ 0.76
SHANK2-213ENST00000460048 CDK8P49336 464 aa19.8■□□□□ 0.76
SHANK2-213ENST00000460048 USP14P54578 494 aa19.8■□□□□ 0.76
SHANK2-213ENST00000460048 IRX3P78415 501 aaPredicted RBP19.8■□□□□ 0.76
SHANK2-213ENST00000460048 PRKCZQ05513 592 aa19.8■□□□□ 0.76
SHANK2-213ENST00000460048 LRRFIP1Q32MZ4 808 aaKnown RBP19.8■□□□□ 0.76
SHANK2-213ENST00000460048 GIMAP6Q6P9H5 292 aa19.8■□□□□ 0.76
SHANK2-213ENST00000460048 AMOTL1Q8IY63 956 aa19.8■□□□□ 0.76
SHANK2-213ENST00000460048 SH3TC2Q8TF17 1288 aa19.8■□□□□ 0.76
SHANK2-213ENST00000460048 P2RX7Q99572 595 aaKnown RBP19.8■□□□□ 0.76
SHANK2-213ENST00000460048 FEZ1Q99689 392 aa19.8■□□□□ 0.76
SHANK2-213ENST00000460048 RWDD1Q9H446 243 aaPredicted RBP19.8■□□□□ 0.76
SHANK2-213ENST00000460048 MORF4L1Q9UBU8 362 aa19.8■□□□□ 0.76
SHANK2-213ENST00000460048 GABRQQ9UN88 632 aa19.8■□□□□ 0.76
SHANK2-213ENST00000460048 RLFQ13129 1914 aa19.8■□□□□ 0.76
SHANK2-213ENST00000460048 M0R2C6 588 aa19.79■□□□□ 0.76
SHANK2-213ENST00000460048 PDE1AP54750 535 aa19.79■□□□□ 0.76
SHANK2-213ENST00000460048 HERVK_113P62684 666 aa19.79■□□□□ 0.76
SHANK2-213ENST00000460048 ZYXQ15942 572 aaKnown RBP19.79■□□□□ 0.76
SHANK2-213ENST00000460048 SBK1Q52WX2 424 aa19.79■□□□□ 0.76
SHANK2-213ENST00000460048 TMEM179Q6ZVK1 233 aa19.79■□□□□ 0.76
SHANK2-213ENST00000460048 ARPP21Q9UBL0 812 aaPredicted RBP19.79■□□□□ 0.76
SHANK2-213ENST00000460048 PARP14Q460N5 1801 aa19.79■□□□□ 0.76
SHANK2-213ENST00000460048 MPHOSPH10O00566 681 aaKnown RBP19.78■□□□□ 0.76
SHANK2-213ENST00000460048 IGHDP01880 384 aa19.78■□□□□ 0.76
SHANK2-213ENST00000460048 AKR1B1P15121 316 aa19.78■□□□□ 0.76
SHANK2-213ENST00000460048 RAET1EQ8TD07 263 aa19.78■□□□□ 0.76
SHANK2-213ENST00000460048 CCDC17Q96LX7 622 aa19.78■□□□□ 0.76
SHANK2-213ENST00000460048 FSD1Q9BTV5 496 aa19.78■□□□□ 0.76
SHANK2-213ENST00000460048 BRCA2P51587 3418 aa19.78■□□□□ 0.76
SHANK2-213ENST00000460048 A0A1W2PRG0 241 aa19.77■□□□□ 0.76
SHANK2-213ENST00000460048 TNPO2O14787 897 aaKnown RBP19.77■□□□□ 0.76
SHANK2-213ENST00000460048 GNAT2P19087 354 aa19.77■□□□□ 0.76
SHANK2-213ENST00000460048 VCAM1P19320 739 aa19.77■□□□□ 0.76
SHANK2-213ENST00000460048 GRK4P32298 578 aa19.77■□□□□ 0.76
SHANK2-213ENST00000460048 ZMYM1Q5SVZ6 1142 aa19.77■□□□□ 0.76
SHANK2-213ENST00000460048 POTEEQ6S8J3 1075 aa19.77■□□□□ 0.76
SHANK2-213ENST00000460048 SEC62Q99442 399 aaKnown RBP19.77■□□□□ 0.76
SHANK2-213ENST00000460048 EPB41L4AQ9HCS5 686 aaPredicted RBP19.77■□□□□ 0.76
SHANK2-213ENST00000460048 TXNRD2Q9NNW7 524 aa19.77■□□□□ 0.76
SHANK2-213ENST00000460048 ROBO3Q96MS0 1386 aa19.76■□□□□ 0.75
SHANK2-213ENST00000460048 USP17L15C9J2P7 530 aa19.76■□□□□ 0.75
SHANK2-213ENST00000460048 USP17L13C9JLJ4 530 aa19.76■□□□□ 0.75
SHANK2-213ENST00000460048 USP17L11C9JVI0 530 aa19.76■□□□□ 0.75
SHANK2-213ENST00000460048 USP17L18D6R9N7 530 aa19.76■□□□□ 0.75
SHANK2-213ENST00000460048 USP17L22D6RA61 530 aa19.76■□□□□ 0.75
SHANK2-213ENST00000460048 USP17L17D6RBQ6 530 aa19.76■□□□□ 0.75
SHANK2-213ENST00000460048 USP17L19D6RCP7 530 aa19.76■□□□□ 0.75
SHANK2-213ENST00000460048 USP17L20D6RJB6 530 aa19.76■□□□□ 0.75
SHANK2-213ENST00000460048 FLT3LGP49771 235 aa19.76■□□□□ 0.75
SHANK2-213ENST00000460048 USP17L24Q0WX57 530 aa19.76■□□□□ 0.75
SHANK2-213ENST00000460048 IRF5Q13568 498 aa19.76■□□□□ 0.75
SHANK2-213ENST00000460048 CATSPERGQ6ZRH7 1159 aa19.76■□□□□ 0.75
SHANK2-213ENST00000460048 SIAH1Q8IUQ4 282 aa19.76■□□□□ 0.75
SHANK2-213ENST00000460048 GTF3C2Q8WUA4 911 aaPredicted RBP19.76■□□□□ 0.75
SHANK2-213ENST00000460048 LNPKQ9C0E8 428 aa19.76■□□□□ 0.75
SHANK2-213ENST00000460048 RBPJLQ9UBG7 517 aa19.76■□□□□ 0.75
SHANK2-213ENST00000460048 PATL2C9JE40 543 aaKnown RBP19.75■□□□□ 0.75
SHANK2-213ENST00000460048 COA7Q96BR5 231 aa19.75■□□□□ 0.75
SHANK2-213ENST00000460048 EVI5LQ96CN4 794 aa19.75■□□□□ 0.75
SHANK2-213ENST00000460048 TMEM106CQ9BVX2 250 aa19.75■□□□□ 0.75
SHANK2-213ENST00000460048 MYH4Q9Y623 1939 aa19.74■□□□□ 0.75
SHANK2-213ENST00000460048 A0A0G2JMZ2 1700 aa19.74■□□□□ 0.75
SHANK2-213ENST00000460048 PEX10O60683 326 aa19.74■□□□□ 0.75
SHANK2-213ENST00000460048 CLEC10AQ8IUN9 316 aa19.74■□□□□ 0.75
SHANK2-213ENST00000460048 SLAIN1Q8ND83 568 aa19.74■□□□□ 0.75
SHANK2-213ENST00000460048 GPRC5AQ8NFJ5 357 aa19.74■□□□□ 0.75
SHANK2-213ENST00000460048 TMX2Q9Y320 296 aa19.74■□□□□ 0.75
SHANK2-213ENST00000460048 EN2P19622 333 aaPredicted RBP19.73■□□□□ 0.75
SHANK2-213ENST00000460048 ERVK-9P63128 1117 aa19.73■□□□□ 0.75
SHANK2-213ENST00000460048 ERVK-24P63145 666 aa19.73■□□□□ 0.75
SHANK2-213ENST00000460048 NUCB1Q02818 461 aa19.73■□□□□ 0.75
SHANK2-213ENST00000460048 ICA1Q05084 483 aa19.73■□□□□ 0.75
SHANK2-213ENST00000460048 MTFR1Q15390 333 aa19.73■□□□□ 0.75
SHANK2-213ENST00000460048 Q3C1V9 767 aa19.73■□□□□ 0.75
SHANK2-213ENST00000460048 KIAA1755Q5JYT7 1200 aa19.73■□□□□ 0.75
SHANK2-213ENST00000460048 B4GALNT3Q6L9W6 998 aa19.73■□□□□ 0.75
SHANK2-213ENST00000460048 LBX2Q6XYB7 198 aa19.73■□□□□ 0.75
SHANK2-213ENST00000460048 CHD1LQ86WJ1 897 aa19.73■□□□□ 0.75
SHANK2-213ENST00000460048 IFNL3Q8IZI9 196 aa19.73■□□□□ 0.75
SHANK2-213ENST00000460048 PXYLP1Q8TE99 480 aa19.73■□□□□ 0.75
SHANK2-213ENST00000460048 RPAP3Q9H6T3 665 aaPredicted RBP19.73■□□□□ 0.75
SHANK2-213ENST00000460048 ARHGEF10LQ9HCE6 1279 aa19.73■□□□□ 0.75
SHANK2-213ENST00000460048 GJD2Q9UKL4 321 aa19.73■□□□□ 0.75
SHANK2-213ENST00000460048 MINDY4BA8MYZ0 360 aa19.72■□□□□ 0.75
SHANK2-213ENST00000460048 ADCY3O60266 1144 aa19.72■□□□□ 0.75
SHANK2-213ENST00000460048 CNMDO75829 334 aa19.72■□□□□ 0.75
SHANK2-213ENST00000460048 RASA1P20936 1047 aa19.72■□□□□ 0.75
SHANK2-213ENST00000460048 TDO2P48775 406 aa19.72■□□□□ 0.75
SHANK2-213ENST00000460048 PDE4DIPQ5VU43 2346 aa19.72■□□□□ 0.75
SHANK2-213ENST00000460048 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.72■□□□□ 0.75
SHANK2-213ENST00000460048 COL11A1P12107 1806 aaPredicted RBP19.72■□□□□ 0.75
SHANK2-213ENST00000460048 MYCP01106 439 aaPredicted RBP19.71■□□□□ 0.75
SHANK2-213ENST00000460048 APPP05067 770 aa19.71■□□□□ 0.75
SHANK2-213ENST00000460048 TICAM2Q86XR7 235 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms