RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 HAUS7Q99871 368 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 SUDS3Q9H7L9 328 aaPredicted RBP12.84□□□□□ -0.35
DDX39B-214ENST00000458640 CAPN7Q9Y6W3 813 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 CASZ1Q86V15 1759 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 ARAP2Q8WZ64 1704 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 ANKRD65E5RJM6 399 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 RNF40O75150 1001 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 RFC4P35249 363 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 MAGEA8P43361 318 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 PPFIA1Q13136 1202 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 TRAPPC3LQ5T215 181 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 USPL1Q5W0Q7 1092 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 RUFY3Q7L099 469 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 TAX1BP1Q86VP1 789 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 KCNB2Q92953 911 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 MKL1Q969V6 931 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 SAAL1Q96ER3 474 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 ANKZF1Q9H8Y5 726 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 SLC24A3Q9HC58 644 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 KLC4Q9NSK0 619 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 CFAP45Q9UL16 551 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 RIPOR2Q9Y4F9 1068 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 RPS6KL1Q9Y6S9 549 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 UBR3Q6ZT12 1888 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 NR1I2O75469 434 aa12.83□□□□□ -0.36
DDX39B-214ENST00000458640 IGHMBP2P38935 993 aaKnown RBP12.83□□□□□ -0.36
DDX39B-214ENST00000458640 CCNHP51946 323 aaPredicted RBP12.83□□□□□ -0.36
DDX39B-214ENST00000458640 CLNS1AP54105 237 aaKnown RBP12.83□□□□□ -0.36
DDX39B-214ENST00000458640 LARP1BQ659C4 914 aaKnown RBP12.83□□□□□ -0.36
DDX39B-214ENST00000458640 C11orf57Q6ZUT1 292 aaPredicted RBP12.83□□□□□ -0.36
DDX39B-214ENST00000458640 TMC6Q7Z403 805 aa12.83□□□□□ -0.36
DDX39B-214ENST00000458640 CDC5LQ99459 802 aaKnown RBP12.83□□□□□ -0.36
DDX39B-214ENST00000458640 VWA3AA6NCI4 1184 aa12.83□□□□□ -0.36
DDX39B-214ENST00000458640 CUTAO60888 179 aa12.83□□□□□ -0.36
DDX39B-214ENST00000458640 TIMM10P62072 90 aa12.83□□□□□ -0.36
DDX39B-214ENST00000458640 IFFO1Q0D2I5 559 aa12.83□□□□□ -0.36
DDX39B-214ENST00000458640 TTC39AQ5SRH9 613 aa12.83□□□□□ -0.36
DDX39B-214ENST00000458640 CEP85LQ5SZL2 805 aa12.83□□□□□ -0.36
DDX39B-214ENST00000458640 TLDC1Q6P9B6 456 aa12.83□□□□□ -0.36
DDX39B-214ENST00000458640 ABCB6Q9NP58 842 aa12.83□□□□□ -0.36
DDX39B-214ENST00000458640 ANAPC4Q9UJX5 808 aa12.83□□□□□ -0.36
DDX39B-214ENST00000458640 VPS37CA5D8V6 355 aaPredicted RBP12.82□□□□□ -0.36
DDX39B-214ENST00000458640 MEFVO15553 781 aaPredicted RBP12.82□□□□□ -0.36
DDX39B-214ENST00000458640 TRIM37O94972 964 aa12.82□□□□□ -0.36
DDX39B-214ENST00000458640 IFIT1P09914 478 aaKnown RBP12.82□□□□□ -0.36
DDX39B-214ENST00000458640 CCT5P48643 541 aa12.82□□□□□ -0.36
DDX39B-214ENST00000458640 IRAK1P51617 712 aa12.82□□□□□ -0.36
DDX39B-214ENST00000458640 CDR1P51861 262 aa12.82□□□□□ -0.36
DDX39B-214ENST00000458640 TBC1D9BQ66K14 1250 aa12.82□□□□□ -0.36
DDX39B-214ENST00000458640 ATL3Q6DD88 541 aa12.82□□□□□ -0.36
DDX39B-214ENST00000458640 RPUSD2Q8IZ73 545 aaKnown RBP12.82□□□□□ -0.36
DDX39B-214ENST00000458640 MICAL1Q8TDZ2 1067 aa12.82□□□□□ -0.36
DDX39B-214ENST00000458640 ARHGEF1Q92888 912 aaKnown RBP12.82□□□□□ -0.36
DDX39B-214ENST00000458640 KIFC2Q96AC6 838 aa12.82□□□□□ -0.36
DDX39B-214ENST00000458640 HOOK2Q96ED9 719 aa12.82□□□□□ -0.36
DDX39B-214ENST00000458640 IRAK4Q9NWZ3 460 aa12.82□□□□□ -0.36
DDX39B-214ENST00000458640 ZEB2O60315 1214 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 N4BP1O75113 896 aaKnown RBP12.81□□□□□ -0.36
DDX39B-214ENST00000458640 PPFIA2O75334 1257 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 RASSF9O75901 435 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 PDE8BO95263 885 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 GCKP35557 465 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 GNG11P61952 73 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 PUM3Q15397 648 aaKnown RBP12.81□□□□□ -0.36
DDX39B-214ENST00000458640 TPRNQ4KMQ1 711 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 TPTE2Q6XPS3 522 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 BICDL1Q6ZP65 573 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 ZNF513Q8N8E2 541 aaPredicted RBP12.81□□□□□ -0.36
DDX39B-214ENST00000458640 FAM76AQ8TAV0 307 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 RSRC1Q96IZ7 334 aaKnown RBP12.81□□□□□ -0.36
DDX39B-214ENST00000458640 PAG1Q9NWQ8 432 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 CDC23Q9UJX2 597 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 PPP2R2CQ9Y2T4 447 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 CARMIL3Q8ND23 1372 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 RXRBP28702 533 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 PDIA5Q14554 519 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 SF3B3Q15393 1217 aaKnown RBP12.81□□□□□ -0.36
DDX39B-214ENST00000458640 ERFEQ4G0M1 354 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 CDCA2Q69YH5 1023 aaPredicted RBP12.81□□□□□ -0.36
DDX39B-214ENST00000458640 KBTBD3Q8NAB2 608 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 EPC1Q9H2F5 836 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 CHCHD3Q9NX63 227 aaKnown RBP12.81□□□□□ -0.36
DDX39B-214ENST00000458640 SRP68Q9UHB9 627 aaKnown RBP12.81□□□□□ -0.36
DDX39B-214ENST00000458640 SNX14Q9Y5W7 946 aa12.81□□□□□ -0.36
DDX39B-214ENST00000458640 EIF3HO15372 352 aaKnown RBP eCLIP12.8□□□□□ -0.36
DDX39B-214ENST00000458640 NMIQ13287 307 aaPredicted RBP12.8□□□□□ -0.36
DDX39B-214ENST00000458640 SNCBQ16143 134 aa12.8□□□□□ -0.36
DDX39B-214ENST00000458640 SLC10A5Q5PT55 438 aa12.8□□□□□ -0.36
DDX39B-214ENST00000458640 VGLL2Q8N8G2 317 aa12.8□□□□□ -0.36
DDX39B-214ENST00000458640 XPO4Q9C0E2 1151 aaKnown RBP12.8□□□□□ -0.36
DDX39B-214ENST00000458640 LSG1Q9H089 658 aaKnown RBP12.8□□□□□ -0.36
DDX39B-214ENST00000458640 ACTR5Q9H9F9 607 aaPredicted RBP12.8□□□□□ -0.36
DDX39B-214ENST00000458640 SNRKQ9NRH2 765 aa12.8□□□□□ -0.36
DDX39B-214ENST00000458640 LRRC4BQ9NT99 713 aa12.8□□□□□ -0.36
DDX39B-214ENST00000458640 RGPD3A6NKT7 1758 aaPredicted RBP12.79□□□□□ -0.36
DDX39B-214ENST00000458640 RGPD4Q7Z3J3 1758 aa12.79□□□□□ -0.36
DDX39B-214ENST00000458640 GOLGA6L7A0A1B0GV03 622 aa12.79□□□□□ -0.36
DDX39B-214ENST00000458640 SRRM3A6NNA2 597 aaPredicted RBP12.79□□□□□ -0.36
DDX39B-214ENST00000458640 STX10O60499 249 aa12.79□□□□□ -0.36
DDX39B-214ENST00000458640 SYF2O95926 243 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms