RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 CREBRFQ8IUR6 639 aa16.12■□□□□ 0.17
SCFD1-203ENST00000458591 ZNF384Q8TF68 577 aa16.12■□□□□ 0.17
SCFD1-203ENST00000458591 TRIM75PA6NK02 468 aa16.12■□□□□ 0.17
SCFD1-203ENST00000458591 CDC25AP30304 524 aa16.12■□□□□ 0.17
SCFD1-203ENST00000458591 FAM193AP78312 1265 aa16.12■□□□□ 0.17
SCFD1-203ENST00000458591 MAP3K9P80192 1104 aa16.12■□□□□ 0.17
SCFD1-203ENST00000458591 NUTM2AQ8IVF1 878 aaPredicted RBP16.12■□□□□ 0.17
SCFD1-203ENST00000458591 SPATA20Q8TB22 786 aa16.12■□□□□ 0.17
SCFD1-203ENST00000458591 NIP7Q9Y221 180 aaKnown RBP eCLIP16.12■□□□□ 0.17
SCFD1-203ENST00000458591 MAGEB6P1A0A0J9YX57 407 aa16.11■□□□□ 0.17
SCFD1-203ENST00000458591 A0A1B0GTH6 734 aa16.11■□□□□ 0.17
SCFD1-203ENST00000458591 RNF225M0QZC1 329 aaPredicted RBP16.11■□□□□ 0.17
SCFD1-203ENST00000458591 IGHMBP2P38935 993 aaKnown RBP16.11■□□□□ 0.17
SCFD1-203ENST00000458591 PPP2R3AQ06190 1150 aa16.11■□□□□ 0.17
SCFD1-203ENST00000458591 TMCO3Q6UWJ1 677 aa16.11■□□□□ 0.17
SCFD1-203ENST00000458591 ZNF579Q8NAF0 562 aaKnown RBP16.11■□□□□ 0.17
SCFD1-203ENST00000458591 JAG2Q9Y219 1238 aa16.11■□□□□ 0.17
SCFD1-203ENST00000458591 XIRP1Q702N8 1843 aaKnown RBP16.11■□□□□ 0.17
SCFD1-203ENST00000458591 CCDC66A2RUB6 948 aa16.11■□□□□ 0.17
SCFD1-203ENST00000458591 EXOC5O00471 708 aa16.11■□□□□ 0.17
SCFD1-203ENST00000458591 CCT6AP40227 531 aaKnown RBP16.11■□□□□ 0.17
SCFD1-203ENST00000458591 CRKLP46109 303 aaKnown RBP16.11■□□□□ 0.17
SCFD1-203ENST00000458591 AKAP17AQ02040 695 aaKnown RBP16.11■□□□□ 0.17
SCFD1-203ENST00000458591 CUL4BQ13620 913 aa16.11■□□□□ 0.17
SCFD1-203ENST00000458591 FAM47AQ5JRC9 791 aa16.11■□□□□ 0.17
SCFD1-203ENST00000458591 IGSF22Q8N9C0 903 aa16.11■□□□□ 0.17
SCFD1-203ENST00000458591 CCDC12Q8WUD4 166 aaPredicted RBP16.11■□□□□ 0.17
SCFD1-203ENST00000458591 CCDC34Q96HJ3 373 aa16.11■□□□□ 0.17
SCFD1-203ENST00000458591 ZSCAN10Q96SZ4 725 aaPredicted RBP16.11■□□□□ 0.17
SCFD1-203ENST00000458591 PHF20Q9BVI0 1012 aa16.11■□□□□ 0.17
SCFD1-203ENST00000458591 MRFAP1Q9Y605 127 aa16.11■□□□□ 0.17
SCFD1-203ENST00000458591 NUP98P52948 1817 aa16.1■□□□□ 0.17
SCFD1-203ENST00000458591 NID2Q14112 1375 aa16.1■□□□□ 0.17
SCFD1-203ENST00000458591 PPP1R3GB7ZBB8 358 aa16.1■□□□□ 0.17
SCFD1-203ENST00000458591 AKR1B15C9JRZ8 316 aaPredicted RBP16.1■□□□□ 0.17
SCFD1-203ENST00000458591 GNAT2P19087 354 aa16.1■□□□□ 0.17
SCFD1-203ENST00000458591 KLRK1P26718 216 aa16.1■□□□□ 0.17
SCFD1-203ENST00000458591 KRT2P35908 639 aa16.1■□□□□ 0.17
SCFD1-203ENST00000458591 ATP6V1AP38606 617 aa16.1■□□□□ 0.17
SCFD1-203ENST00000458591 KCNQ4P56696 695 aa16.1■□□□□ 0.17
SCFD1-203ENST00000458591 NPY5RQ15761 445 aa16.1■□□□□ 0.17
SCFD1-203ENST00000458591 FCHSD1Q86WN1 690 aa16.1■□□□□ 0.17
SCFD1-203ENST00000458591 ELOA2Q8IYF1 753 aaPredicted RBP16.1■□□□□ 0.17
SCFD1-203ENST00000458591 RIOK1Q9BRS2 568 aaKnown RBP16.1■□□□□ 0.17
SCFD1-203ENST00000458591 NOL10Q9BSC4 688 aaKnown RBP16.1■□□□□ 0.17
SCFD1-203ENST00000458591 MAPK8IP1Q9UQF2 711 aa16.1■□□□□ 0.17
SCFD1-203ENST00000458591 ITGB4P16144 1822 aa16.1■□□□□ 0.17
SCFD1-203ENST00000458591 CCDC196A0A1B0GTZ2 297 aa16.09■□□□□ 0.17
SCFD1-203ENST00000458591 EFCAB8A8MWE9 144 aa16.09■□□□□ 0.17
SCFD1-203ENST00000458591 CASP14P31944 242 aa16.09■□□□□ 0.17
SCFD1-203ENST00000458591 ITPK1Q13572 414 aa16.09■□□□□ 0.17
SCFD1-203ENST00000458591 ESR2Q92731 530 aa16.09■□□□□ 0.17
SCFD1-203ENST00000458591 PUF60Q9UHX1 559 aaKnown RBP16.09■□□□□ 0.17
SCFD1-203ENST00000458591 CTNND2Q9UQB3 1225 aa16.09■□□□□ 0.17
SCFD1-203ENST00000458591 MYH3P11055 1940 aa16.09■□□□□ 0.17
SCFD1-203ENST00000458591 CAMTA2O94983 1202 aa16.09■□□□□ 0.17
SCFD1-203ENST00000458591 NTSR2O95665 410 aa16.09■□□□□ 0.17
SCFD1-203ENST00000458591 FXR1P51114 621 aaKnown RBP eCLIP16.09■□□□□ 0.17
SCFD1-203ENST00000458591 PTGDRQ13258 359 aa16.09■□□□□ 0.17
SCFD1-203ENST00000458591 IL17AQ16552 155 aa16.09■□□□□ 0.17
SCFD1-203ENST00000458591 CCDC152Q4G0S7 254 aa16.09■□□□□ 0.17
SCFD1-203ENST00000458591 IFIT1BQ5T764 474 aaKnown RBP16.09■□□□□ 0.17
SCFD1-203ENST00000458591 SH3RF1Q7Z6J0 888 aa16.09■□□□□ 0.17
SCFD1-203ENST00000458591 MTRQ99707 1265 aa16.09■□□□□ 0.17
SCFD1-203ENST00000458591 RNF26Q9BY78 433 aaPredicted RBP16.09■□□□□ 0.17
SCFD1-203ENST00000458591 AATFQ9NY61 560 aaKnown RBP eCLIP16.09■□□□□ 0.17
SCFD1-203ENST00000458591 DACH1Q9UI36 760 aa16.09■□□□□ 0.17
SCFD1-203ENST00000458591 COL1A1P02452 1464 aaPredicted RBP16.09■□□□□ 0.17
SCFD1-203ENST00000458591 SYNRGQ9UMZ2 1314 aa16.09■□□□□ 0.17
SCFD1-203ENST00000458591 TBC1D8O95759 1140 aa16.08■□□□□ 0.17
SCFD1-203ENST00000458591 CYP2D6P10635 497 aa16.08■□□□□ 0.17
SCFD1-203ENST00000458591 GYS2P54840 703 aa16.08■□□□□ 0.17
SCFD1-203ENST00000458591 TMTC2Q8N394 836 aa16.08■□□□□ 0.17
SCFD1-203ENST00000458591 SRBD1Q8N5C6 995 aaKnown RBP16.08■□□□□ 0.17
SCFD1-203ENST00000458591 ACRBPQ8NEB7 543 aa16.08■□□□□ 0.17
SCFD1-203ENST00000458591 PARD6BQ9BYG5 372 aa16.08■□□□□ 0.17
SCFD1-203ENST00000458591 RNF41Q9H4P4 317 aaPredicted RBP16.08■□□□□ 0.17
SCFD1-203ENST00000458591 CEP131Q9UPN4 1083 aa16.08■□□□□ 0.17
SCFD1-203ENST00000458591 BAZ2BQ9UIF8 2168 aaKnown RBP16.08■□□□□ 0.16
SCFD1-203ENST00000458591 MYO1BO43795 1136 aa16.08■□□□□ 0.16
SCFD1-203ENST00000458591 TROAPQ12815 778 aa16.08■□□□□ 0.16
SCFD1-203ENST00000458591 SPATA1Q5VX52 437 aa16.08■□□□□ 0.16
SCFD1-203ENST00000458591 CCDC87Q9NVE4 849 aa16.08■□□□□ 0.16
SCFD1-203ENST00000458591 ARGLU1Q9NWB6 273 aaPredicted RBP16.08■□□□□ 0.16
SCFD1-203ENST00000458591 ADD3Q9UEY8 706 aaKnown RBP16.08■□□□□ 0.16
SCFD1-203ENST00000458591 ADGRG1Q9Y653 693 aa16.08■□□□□ 0.16
SCFD1-203ENST00000458591 XDHP47989 1333 aa16.08■□□□□ 0.16
SCFD1-203ENST00000458591 USP17L12C9JPN9 530 aa16.07■□□□□ 0.16
SCFD1-203ENST00000458591 USP17L21D6R901 530 aa16.07■□□□□ 0.16
SCFD1-203ENST00000458591 ERCC5P28715 1186 aaPredicted RBP16.07■□□□□ 0.16
SCFD1-203ENST00000458591 CC2D1AQ6P1N0 951 aaPredicted RBP16.07■□□□□ 0.16
SCFD1-203ENST00000458591 PIK3AP1Q6ZUJ8 805 aa16.07■□□□□ 0.16
SCFD1-203ENST00000458591 RSRC2Q7L4I2 434 aaKnown RBP16.07■□□□□ 0.16
SCFD1-203ENST00000458591 SLC51AQ86UW1 340 aa16.07■□□□□ 0.16
SCFD1-203ENST00000458591 CCDC24Q8N4L8 307 aa16.07■□□□□ 0.16
SCFD1-203ENST00000458591 TRIML1Q8N9V2 468 aa16.07■□□□□ 0.16
SCFD1-203ENST00000458591 VPS16Q9H269 839 aa16.07■□□□□ 0.16
SCFD1-203ENST00000458591 TIAM2Q8IVF5 1701 aa16.07■□□□□ 0.16
SCFD1-203ENST00000458591 LRP5O75197 1615 aa16.07■□□□□ 0.16
SCFD1-203ENST00000458591 CTR9Q6PD62 1173 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms