RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 ODR4Q5SWX8 454 aa13.49□□□□□ -0.25
SYNE2-207ENST00000458046 RNF187Q5TA31 235 aaPredicted RBP13.49□□□□□ -0.25
SYNE2-207ENST00000458046 SYNE3Q6ZMZ3 975 aa13.49□□□□□ -0.25
SYNE2-207ENST00000458046 NYAP1Q6ZVC0 841 aa13.49□□□□□ -0.25
SYNE2-207ENST00000458046 NCOA7Q8NI08 942 aa13.49□□□□□ -0.25
SYNE2-207ENST00000458046 NKX2-3Q8TAU0 364 aa13.49□□□□□ -0.25
SYNE2-207ENST00000458046 APPBP2Q92624 585 aa13.49□□□□□ -0.25
SYNE2-207ENST00000458046 SEZ6LQ9BYH1 1024 aa13.49□□□□□ -0.25
SYNE2-207ENST00000458046 SOS2Q07890 1332 aaPredicted RBP13.49□□□□□ -0.25
SYNE2-207ENST00000458046 WDR17Q8IZU2 1322 aa13.49□□□□□ -0.25
SYNE2-207ENST00000458046 ADAMTS2O95450 1211 aa13.49□□□□□ -0.25
SYNE2-207ENST00000458046 ZFYP08048 801 aaPredicted RBP13.49□□□□□ -0.25
SYNE2-207ENST00000458046 ATP2B1P20020 1258 aa13.49□□□□□ -0.25
SYNE2-207ENST00000458046 MYSM1Q5VVJ2 828 aa13.49□□□□□ -0.25
SYNE2-207ENST00000458046 CEP135Q66GS9 1140 aa13.49□□□□□ -0.25
SYNE2-207ENST00000458046 ANKRD7Q92527 254 aa13.49□□□□□ -0.25
SYNE2-207ENST00000458046 CHMP4CQ96CF2 233 aa13.49□□□□□ -0.25
SYNE2-207ENST00000458046 AIFM3Q96NN9 605 aa13.49□□□□□ -0.25
SYNE2-207ENST00000458046 NAT10Q9H0A0 1025 aaKnown RBP13.49□□□□□ -0.25
SYNE2-207ENST00000458046 KIAA1468Q9P260 1216 aa13.49□□□□□ -0.25
SYNE2-207ENST00000458046 FARP1Q9Y4F1 1045 aaPredicted RBP13.49□□□□□ -0.25
SYNE2-207ENST00000458046 MARCKSP29966 332 aaPredicted RBP13.48□□□□□ -0.25
SYNE2-207ENST00000458046 NCBP1Q09161 790 aaKnown RBP13.48□□□□□ -0.25
SYNE2-207ENST00000458046 METTL24Q5JXM2 366 aa13.48□□□□□ -0.25
SYNE2-207ENST00000458046 CCDC112Q8NEF3 446 aa13.48□□□□□ -0.25
SYNE2-207ENST00000458046 SYNPO2Q9UMS6 1093 aa13.48□□□□□ -0.25
SYNE2-207ENST00000458046 SIM2Q14190 667 aaPredicted RBP13.48□□□□□ -0.25
SYNE2-207ENST00000458046 PPP1R18Q6NYC8 613 aa13.48□□□□□ -0.25
SYNE2-207ENST00000458046 LDHAL6AQ6ZMR3 332 aa13.48□□□□□ -0.25
SYNE2-207ENST00000458046 FBXL16Q8N461 479 aa13.48□□□□□ -0.25
SYNE2-207ENST00000458046 SVIPQ8NHG7 77 aa13.48□□□□□ -0.25
SYNE2-207ENST00000458046 A0A1W2PQ27 194 aa13.47□□□□□ -0.25
SYNE2-207ENST00000458046 A0A1W2PQ64 194 aa13.47□□□□□ -0.25
SYNE2-207ENST00000458046 A0A1W2PQD8 194 aa13.47□□□□□ -0.25
SYNE2-207ENST00000458046 IL2RBP14784 551 aa13.47□□□□□ -0.25
SYNE2-207ENST00000458046 MCAMP43121 646 aa13.47□□□□□ -0.25
SYNE2-207ENST00000458046 SLC9C2Q5TAH2 1124 aa13.47□□□□□ -0.25
SYNE2-207ENST00000458046 DNAJC10Q8IXB1 793 aa13.47□□□□□ -0.25
SYNE2-207ENST00000458046 KCNG4Q8TDN1 519 aa13.47□□□□□ -0.25
SYNE2-207ENST00000458046 PAXBP1Q9Y5B6 917 aa13.47□□□□□ -0.25
SYNE2-207ENST00000458046 ZNF202O95125 648 aa13.47□□□□□ -0.25
SYNE2-207ENST00000458046 PDGFRBP09619 1106 aa13.47□□□□□ -0.25
SYNE2-207ENST00000458046 ZRSR2Q15696 482 aaKnown RBP13.47□□□□□ -0.25
SYNE2-207ENST00000458046 METTL16Q86W50 562 aaKnown RBP13.47□□□□□ -0.25
SYNE2-207ENST00000458046 ASAP1Q9ULH1 1129 aa13.47□□□□□ -0.25
SYNE2-207ENST00000458046 IDH1O75874 414 aaKnown RBP13.47□□□□□ -0.25
SYNE2-207ENST00000458046 SMC2O95347 1197 aa13.47□□□□□ -0.25
SYNE2-207ENST00000458046 SLC3A2P08195 630 aaKnown RBP13.47□□□□□ -0.25
SYNE2-207ENST00000458046 CCZ1BP86790 482 aa13.47□□□□□ -0.25
SYNE2-207ENST00000458046 CCZ1P86791 482 aaPredicted RBP13.47□□□□□ -0.25
SYNE2-207ENST00000458046 MLLT1Q03111 559 aaPredicted RBP13.47□□□□□ -0.25
SYNE2-207ENST00000458046 PTPN14Q15678 1187 aa13.47□□□□□ -0.25
SYNE2-207ENST00000458046 KIF6Q6ZMV9 814 aa13.47□□□□□ -0.25
SYNE2-207ENST00000458046 RPAINQ86UA6 219 aa13.47□□□□□ -0.25
SYNE2-207ENST00000458046 SMAP1Q8IYB5 467 aaPredicted RBP13.47□□□□□ -0.25
SYNE2-207ENST00000458046 GREM2Q9H772 168 aa13.47□□□□□ -0.25
SYNE2-207ENST00000458046 CPDO75976 1380 aa13.46□□□□□ -0.25
SYNE2-207ENST00000458046 TNFRSF10BO14763 440 aa13.46□□□□□ -0.25
SYNE2-207ENST00000458046 NEMFO60524 1076 aa13.46□□□□□ -0.25
SYNE2-207ENST00000458046 YEATS4O95619 227 aa13.46□□□□□ -0.25
SYNE2-207ENST00000458046 PCCAP05165 728 aaPredicted RBP13.46□□□□□ -0.25
SYNE2-207ENST00000458046 KIF23Q02241 960 aaPredicted RBP13.46□□□□□ -0.25
SYNE2-207ENST00000458046 TRDNQ13061 729 aa13.46□□□□□ -0.25
SYNE2-207ENST00000458046 HLFQ16534 295 aa13.46□□□□□ -0.25
SYNE2-207ENST00000458046 ANO1Q5XXA6 986 aa13.46□□□□□ -0.25
SYNE2-207ENST00000458046 CYB5R4Q7L1T6 521 aa13.46□□□□□ -0.25
SYNE2-207ENST00000458046 NBPF3Q9H094 633 aa13.46□□□□□ -0.25
SYNE2-207ENST00000458046 SENP2Q9HC62 589 aa13.46□□□□□ -0.25
SYNE2-207ENST00000458046 CASS4Q9NQ75 786 aa13.46□□□□□ -0.25
SYNE2-207ENST00000458046 INCENPQ9NQS7 918 aa13.46□□□□□ -0.25
SYNE2-207ENST00000458046 CNNM1Q9NRU3 951 aa13.46□□□□□ -0.25
SYNE2-207ENST00000458046 TMOD3Q9NYL9 352 aa13.46□□□□□ -0.25
SYNE2-207ENST00000458046 IFNKQ9P0W0 207 aa13.46□□□□□ -0.25
SYNE2-207ENST00000458046 SLC45A1Q9Y2W3 748 aa13.46□□□□□ -0.25
SYNE2-207ENST00000458046 CSF1RP07333 972 aa13.46□□□□□ -0.26
SYNE2-207ENST00000458046 LMNB1P20700 586 aa13.46□□□□□ -0.26
SYNE2-207ENST00000458046 ITGA6P23229 1130 aa13.46□□□□□ -0.26
SYNE2-207ENST00000458046 ZBTB38Q8NAP3 1195 aaPredicted RBP13.46□□□□□ -0.26
SYNE2-207ENST00000458046 PHKBQ93100 1093 aa13.46□□□□□ -0.26
SYNE2-207ENST00000458046 XPO4Q9C0E2 1151 aaKnown RBP13.46□□□□□ -0.26
SYNE2-207ENST00000458046 PFKFB1P16118 471 aa13.45□□□□□ -0.26
SYNE2-207ENST00000458046 GNALP38405 381 aa13.45□□□□□ -0.26
SYNE2-207ENST00000458046 PKD1L3Q7Z443 1732 aa13.45□□□□□ -0.26
SYNE2-207ENST00000458046 BRAPQ7Z569 592 aa13.45□□□□□ -0.26
SYNE2-207ENST00000458046 TBC1D10CQ8IV04 446 aa13.45□□□□□ -0.26
SYNE2-207ENST00000458046 STK32AQ8WU08 396 aa13.45□□□□□ -0.26
SYNE2-207ENST00000458046 SYTL4Q96C24 671 aaPredicted RBP13.45□□□□□ -0.26
SYNE2-207ENST00000458046 SYT17Q9BSW7 474 aa13.45□□□□□ -0.26
SYNE2-207ENST00000458046 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.45□□□□□ -0.26
SYNE2-207ENST00000458046 THSD7AQ9UPZ6 1657 aa13.45□□□□□ -0.26
SYNE2-207ENST00000458046 KCPQ6ZWJ8 1503 aa13.45□□□□□ -0.26
SYNE2-207ENST00000458046 RFC5P40937 340 aa13.45□□□□□ -0.26
SYNE2-207ENST00000458046 TMC6Q7Z403 805 aa13.45□□□□□ -0.26
SYNE2-207ENST00000458046 UCN2Q96RP3 112 aa13.45□□□□□ -0.26
SYNE2-207ENST00000458046 ALG1Q9BT22 464 aa13.45□□□□□ -0.26
SYNE2-207ENST00000458046 MFRPQ9BY79 579 aa13.45□□□□□ -0.26
SYNE2-207ENST00000458046 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.45□□□□□ -0.26
SYNE2-207ENST00000458046 PIH1D3Q9NQM4 214 aaKnown RBP13.45□□□□□ -0.26
SYNE2-207ENST00000458046 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.45□□□□□ -0.26
SYNE2-207ENST00000458046 V9GYY5 206 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms