RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 KRT27Q7Z3Y8 459 aa15.47■□□□□ 0.07
TOP3B-213ENST00000457179 PHLPP2Q6ZVD8 1323 aa15.46■□□□□ 0.07
TOP3B-213ENST00000457179 TPM1P09493 284 aa15.46■□□□□ 0.07
TOP3B-213ENST00000457179 CYP2D6P10635 497 aa15.46■□□□□ 0.07
TOP3B-213ENST00000457179 LMOD1P29536 600 aaPredicted RBP15.46■□□□□ 0.07
TOP3B-213ENST00000457179 MECOMQ03112 1051 aa15.46■□□□□ 0.07
TOP3B-213ENST00000457179 FAM160A1Q05DH4 1040 aa15.46■□□□□ 0.07
TOP3B-213ENST00000457179 PPP2R3AQ06190 1150 aa15.46■□□□□ 0.07
TOP3B-213ENST00000457179 LONRF2Q1L5Z9 754 aa15.46■□□□□ 0.07
TOP3B-213ENST00000457179 AKNAD1Q5T1N1 836 aa15.46■□□□□ 0.07
TOP3B-213ENST00000457179 APOA5Q6Q788 366 aa15.46■□□□□ 0.07
TOP3B-213ENST00000457179 ALG1Q9BT22 464 aa15.46■□□□□ 0.07
TOP3B-213ENST00000457179 BRMS1Q9HCU9 246 aa15.46■□□□□ 0.07
TOP3B-213ENST00000457179 KCND1Q9NSA2 647 aa15.46■□□□□ 0.07
TOP3B-213ENST00000457179 IVLP07476 585 aa15.46■□□□□ 0.07
TOP3B-213ENST00000457179 GNG11P61952 73 aa15.46■□□□□ 0.07
TOP3B-213ENST00000457179 DPCR1Q3MIW9 517 aa15.46■□□□□ 0.07
TOP3B-213ENST00000457179 MRPS27Q92552 414 aaKnown RBP15.46■□□□□ 0.07
TOP3B-213ENST00000457179 IMPACTQ9P2X3 320 aa15.46■□□□□ 0.07
TOP3B-213ENST00000457179 ATP8B1O43520 1251 aa15.45■□□□□ 0.06
TOP3B-213ENST00000457179 N4BP1O75113 896 aaKnown RBP15.45■□□□□ 0.06
TOP3B-213ENST00000457179 SERPINB2P05120 415 aa15.45■□□□□ 0.06
TOP3B-213ENST00000457179 UBE4AQ14139 1066 aa15.45■□□□□ 0.06
TOP3B-213ENST00000457179 TRIM65Q6PJ69 517 aa15.45■□□□□ 0.06
TOP3B-213ENST00000457179 SRRTQ9BXP5 876 aaKnown RBP15.45■□□□□ 0.06
TOP3B-213ENST00000457179 KCNJ14Q9UNX9 436 aa15.45■□□□□ 0.06
TOP3B-213ENST00000457179 CNTNAP4Q9C0A0 1308 aa15.45■□□□□ 0.06
TOP3B-213ENST00000457179 CTAGE5O15320 804 aa15.45■□□□□ 0.06
TOP3B-213ENST00000457179 UFL1O94874 794 aa15.45■□□□□ 0.06
TOP3B-213ENST00000457179 MYSM1Q5VVJ2 828 aa15.45■□□□□ 0.06
TOP3B-213ENST00000457179 WWC2Q6AWC2 1192 aa15.45■□□□□ 0.06
TOP3B-213ENST00000457179 GPR161Q8N6U8 529 aaKnown RBP15.45■□□□□ 0.06
TOP3B-213ENST00000457179 SPATA31A6Q5VVP1 1343 aa15.45■□□□□ 0.06
TOP3B-213ENST00000457179 SPTLC2O15270 562 aa15.45■□□□□ 0.06
TOP3B-213ENST00000457179 APBA3O96018 575 aa15.45■□□□□ 0.06
TOP3B-213ENST00000457179 PPARAQ07869 468 aa15.45■□□□□ 0.06
TOP3B-213ENST00000457179 GRIK5Q16478 980 aa15.45■□□□□ 0.06
TOP3B-213ENST00000457179 CT47A1Q5JQC4 288 aaPredicted RBP15.45■□□□□ 0.06
TOP3B-213ENST00000457179 PRR5LQ6MZQ0 368 aa15.45■□□□□ 0.06
TOP3B-213ENST00000457179 LINC00301Q8NCQ3 95 aa15.45■□□□□ 0.06
TOP3B-213ENST00000457179 MCM9Q9NXL9 1143 aa15.45■□□□□ 0.06
TOP3B-213ENST00000457179 SAP30BPQ9UHR5 308 aaKnown RBP15.45■□□□□ 0.06
TOP3B-213ENST00000457179 PAPPAQ13219 1627 aa15.44■□□□□ 0.06
TOP3B-213ENST00000457179 IARSP41252 1262 aaKnown RBP15.44■□□□□ 0.06
TOP3B-213ENST00000457179 WTAPQ15007 396 aa15.44■□□□□ 0.06
TOP3B-213ENST00000457179 SPECC1Q5M775 1068 aa15.44■□□□□ 0.06
TOP3B-213ENST00000457179 CPLX2Q6PUV4 134 aaKnown RBP15.44■□□□□ 0.06
TOP3B-213ENST00000457179 COL4A1P02462 1669 aa15.44■□□□□ 0.06
TOP3B-213ENST00000457179 ENGASEQ8NFI3 743 aa15.44■□□□□ 0.06
TOP3B-213ENST00000457179 ZNF384Q8TF68 577 aa15.44■□□□□ 0.06
TOP3B-213ENST00000457179 WDR24Q96S15 920 aa15.44■□□□□ 0.06
TOP3B-213ENST00000457179 RNF216Q9NWF9 866 aaPredicted RBP15.44■□□□□ 0.06
TOP3B-213ENST00000457179 FAN1Q9Y2M0 1017 aa15.44■□□□□ 0.06
TOP3B-213ENST00000457179 GUCY1A2P33402 732 aa15.43■□□□□ 0.06
TOP3B-213ENST00000457179 SUGCTQ9HAC7 445 aa15.43■□□□□ 0.06
TOP3B-213ENST00000457179 SH2B2O14492 632 aaPredicted RBP15.42■□□□□ 0.06
TOP3B-213ENST00000457179 USP5P45974 858 aa15.42■□□□□ 0.06
TOP3B-213ENST00000457179 MMP14P50281 582 aa15.42■□□□□ 0.06
TOP3B-213ENST00000457179 HSP90AA4PQ58FG1 418 aa15.42■□□□□ 0.06
TOP3B-213ENST00000457179 CCDC102AQ96A19 550 aa15.42■□□□□ 0.06
TOP3B-213ENST00000457179 ZNF512BQ96KM6 892 aaPredicted RBP15.42■□□□□ 0.06
TOP3B-213ENST00000457179 CLIC6Q96NY7 704 aa15.42■□□□□ 0.06
TOP3B-213ENST00000457179 USP17L8P0C7I0 530 aa15.42■□□□□ 0.06
TOP3B-213ENST00000457179 ATP1A3P13637 1013 aa15.42■□□□□ 0.06
TOP3B-213ENST00000457179 GYS1P13807 737 aa15.42■□□□□ 0.06
TOP3B-213ENST00000457179 TRIM29Q14134 588 aa15.42■□□□□ 0.06
TOP3B-213ENST00000457179 PPM1EQ8WY54 764 aa15.42■□□□□ 0.06
TOP3B-213ENST00000457179 PSD3Q9NYI0 1048 aa15.42■□□□□ 0.06
TOP3B-213ENST00000457179 KIF23Q02241 960 aaPredicted RBP15.42■□□□□ 0.06
TOP3B-213ENST00000457179 TXNRD1Q16881 649 aa15.42■□□□□ 0.06
TOP3B-213ENST00000457179 BANK1Q8NDB2 785 aa15.42■□□□□ 0.06
TOP3B-213ENST00000457179 IGDCC4Q8TDY8 1250 aa15.42■□□□□ 0.06
TOP3B-213ENST00000457179 LY9Q9HBG7 655 aa15.42■□□□□ 0.06
TOP3B-213ENST00000457179 RTEL1Q9NZ71 1219 aa15.42■□□□□ 0.06
TOP3B-213ENST00000457179 LAMA4Q16363 1823 aa15.41■□□□□ 0.06
TOP3B-213ENST00000457179 CCP110O43303 1012 aa15.41■□□□□ 0.06
TOP3B-213ENST00000457179 KRT40Q6A162 431 aa15.41■□□□□ 0.06
TOP3B-213ENST00000457179 FMR1NBQ8N0W7 255 aaPredicted RBP15.41■□□□□ 0.06
TOP3B-213ENST00000457179 MICALL1Q8N3F8 863 aa15.41■□□□□ 0.06
TOP3B-213ENST00000457179 DYNLL2Q96FJ2 89 aa15.41■□□□□ 0.06
TOP3B-213ENST00000457179 PUF60Q9UHX1 559 aaKnown RBP15.41■□□□□ 0.06
TOP3B-213ENST00000457179 TNKSO95271 1327 aa15.41■□□□□ 0.06
TOP3B-213ENST00000457179 MYO5AQ9Y4I1 1855 aaKnown RBP15.41■□□□□ 0.06
TOP3B-213ENST00000457179 G3V3G9 751 aa15.41■□□□□ 0.06
TOP3B-213ENST00000457179 WDHD1O75717 1129 aaPredicted RBP15.41■□□□□ 0.06
TOP3B-213ENST00000457179 DCAF8Q5TAQ9 597 aa15.41■□□□□ 0.06
TOP3B-213ENST00000457179 RC3H1Q5TC82 1133 aaKnown RBP15.41■□□□□ 0.06
TOP3B-213ENST00000457179 ANO1Q5XXA6 986 aa15.41■□□□□ 0.06
TOP3B-213ENST00000457179 ADALQ6DHV7 355 aa15.41■□□□□ 0.06
TOP3B-213ENST00000457179 SLC44A5Q8NCS7 719 aa15.41■□□□□ 0.06
TOP3B-213ENST00000457179 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.41■□□□□ 0.06
TOP3B-213ENST00000457179 ZNF202O95125 648 aa15.4■□□□□ 0.06
TOP3B-213ENST00000457179 TM4SF1P30408 202 aa15.4■□□□□ 0.06
TOP3B-213ENST00000457179 MAPKAPK5Q8IW41 473 aa15.4■□□□□ 0.06
TOP3B-213ENST00000457179 GOLGA1Q92805 767 aa15.4■□□□□ 0.06
TOP3B-213ENST00000457179 ZNF622Q969S3 477 aaKnown RBP eCLIP15.4■□□□□ 0.066e-7■□□□□ 11.1
TOP3B-213ENST00000457179 DHX58Q96C10 678 aa15.4■□□□□ 0.06
TOP3B-213ENST00000457179 RAD21O60216 631 aa15.4■□□□□ 0.06
TOP3B-213ENST00000457179 SLC3A2P08195 630 aaKnown RBP15.4■□□□□ 0.06
TOP3B-213ENST00000457179 KARSQ15046 597 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms