RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 TFRCP02786 760 aaKnown RBP18.5■□□□□ 0.55
CROCCP4-201ENST00000457096 GABPAQ06546 454 aa18.5■□□□□ 0.55
CROCCP4-201ENST00000457096 CLEC10AQ8IUN9 316 aa18.5■□□□□ 0.55
CROCCP4-201ENST00000457096 NKX2-3Q8TAU0 364 aa18.5■□□□□ 0.55
CROCCP4-201ENST00000457096 DIS3LQ8TF46 1054 aaKnown RBP18.5■□□□□ 0.55
CROCCP4-201ENST00000457096 TRIB2Q92519 343 aa18.5■□□□□ 0.55
CROCCP4-201ENST00000457096 DCP1AQ9NPI6 582 aaPredicted RBP18.5■□□□□ 0.55
CROCCP4-201ENST00000457096 MPHOSPH10O00566 681 aaKnown RBP18.49■□□□□ 0.55
CROCCP4-201ENST00000457096 ADD2P35612 726 aa18.49■□□□□ 0.55
CROCCP4-201ENST00000457096 ERVK-9P63128 1117 aa18.49■□□□□ 0.55
CROCCP4-201ENST00000457096 ERVK-24P63145 666 aa18.49■□□□□ 0.55
CROCCP4-201ENST00000457096 TSHZ3Q63HK5 1081 aa18.49■□□□□ 0.55
CROCCP4-201ENST00000457096 CERS3Q8IU89 383 aa18.49■□□□□ 0.55
CROCCP4-201ENST00000457096 GPRC5AQ8NFJ5 357 aa18.49■□□□□ 0.55
CROCCP4-201ENST00000457096 GCC1Q96CN9 775 aa18.49■□□□□ 0.55
CROCCP4-201ENST00000457096 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.49■□□□□ 0.55
CROCCP4-201ENST00000457096 PAK6Q9NQU5 681 aaPredicted RBP18.49■□□□□ 0.55
CROCCP4-201ENST00000457096 GINM1Q9NU53 330 aa18.49■□□□□ 0.55
CROCCP4-201ENST00000457096 A0A1W2PRG0 241 aa18.48■□□□□ 0.55
CROCCP4-201ENST00000457096 ATP5JP18859 108 aa18.48■□□□□ 0.55
CROCCP4-201ENST00000457096 VCAM1P19320 739 aa18.48■□□□□ 0.55
CROCCP4-201ENST00000457096 CCL14Q16627 93 aa18.48■□□□□ 0.55
CROCCP4-201ENST00000457096 HAUS7Q99871 368 aa18.48■□□□□ 0.55
CROCCP4-201ENST00000457096 PCDH10Q9P2E7 1040 aa18.48■□□□□ 0.55
CROCCP4-201ENST00000457096 HMGCRP04035 888 aa18.47■□□□□ 0.55
CROCCP4-201ENST00000457096 KIAA1755Q5JYT7 1200 aa18.47■□□□□ 0.55
CROCCP4-201ENST00000457096 CHRDL2Q6WN34 429 aa18.47■□□□□ 0.55
CROCCP4-201ENST00000457096 GPR142Q7Z601 462 aa18.47■□□□□ 0.55
CROCCP4-201ENST00000457096 C12orf42Q96LP6 360 aa18.47■□□□□ 0.55
CROCCP4-201ENST00000457096 LRRCC1Q9C099 1032 aa18.47■□□□□ 0.55
CROCCP4-201ENST00000457096 KIAA1683Q9H0B3 1180 aa18.47■□□□□ 0.55
CROCCP4-201ENST00000457096 RPAP3Q9H6T3 665 aaPredicted RBP18.47■□□□□ 0.55
CROCCP4-201ENST00000457096 CABP5Q9NP86 173 aa18.47■□□□□ 0.55
CROCCP4-201ENST00000457096 USP17L15C9J2P7 530 aa18.46■□□□□ 0.55
CROCCP4-201ENST00000457096 USP17L13C9JLJ4 530 aa18.46■□□□□ 0.55
CROCCP4-201ENST00000457096 USP17L11C9JVI0 530 aa18.46■□□□□ 0.55
CROCCP4-201ENST00000457096 USP17L18D6R9N7 530 aa18.46■□□□□ 0.55
CROCCP4-201ENST00000457096 USP17L22D6RA61 530 aa18.46■□□□□ 0.55
CROCCP4-201ENST00000457096 USP17L17D6RBQ6 530 aa18.46■□□□□ 0.55
CROCCP4-201ENST00000457096 USP17L19D6RCP7 530 aa18.46■□□□□ 0.55
CROCCP4-201ENST00000457096 USP17L20D6RJB6 530 aa18.46■□□□□ 0.55
CROCCP4-201ENST00000457096 USP17L24Q0WX57 530 aa18.46■□□□□ 0.55
CROCCP4-201ENST00000457096 PDE3AQ14432 1141 aa18.46■□□□□ 0.55
CROCCP4-201ENST00000457096 CATSPERGQ6ZRH7 1159 aa18.46■□□□□ 0.55
CROCCP4-201ENST00000457096 PAWRQ96IZ0 340 aaKnown RBP18.46■□□□□ 0.55
CROCCP4-201ENST00000457096 CRISPLD2Q9H0B8 497 aa18.46■□□□□ 0.55
CROCCP4-201ENST00000457096 BTBD7Q9P203 1132 aa18.46■□□□□ 0.55
CROCCP4-201ENST00000457096 AKR1B1P15121 316 aa18.45■□□□□ 0.54
CROCCP4-201ENST00000457096 NUDT12Q9BQG2 462 aa18.45■□□□□ 0.54
CROCCP4-201ENST00000457096 PUS7LQ9H0K6 701 aaKnown RBP18.45■□□□□ 0.54
CROCCP4-201ENST00000457096 SPDYE16A6NNV3 312 aaPredicted RBP18.44■□□□□ 0.54
CROCCP4-201ENST00000457096 FXR1P51114 621 aaKnown RBP eCLIP18.44■□□□□ 0.54
CROCCP4-201ENST00000457096 MORN1Q5T089 497 aa18.44■□□□□ 0.54
CROCCP4-201ENST00000457096 WDR78Q5VTH9 848 aa18.44■□□□□ 0.54
CROCCP4-201ENST00000457096 TMED8Q6PL24 325 aaPredicted RBP18.44■□□□□ 0.54
CROCCP4-201ENST00000457096 USP6NLQ92738 828 aa18.44■□□□□ 0.54
CROCCP4-201ENST00000457096 USP17L12C9JPN9 530 aa18.43■□□□□ 0.54
CROCCP4-201ENST00000457096 USP17L21D6R901 530 aa18.43■□□□□ 0.54
CROCCP4-201ENST00000457096 PRKAR2AP13861 404 aaKnown RBP18.43■□□□□ 0.54
CROCCP4-201ENST00000457096 MAPK4P31152 587 aa18.43■□□□□ 0.54
CROCCP4-201ENST00000457096 USP14P54578 494 aa18.43■□□□□ 0.54
CROCCP4-201ENST00000457096 PLEKHH3Q7Z736 793 aa18.43■□□□□ 0.54
CROCCP4-201ENST00000457096 SIAH1Q8IUQ4 282 aa18.43■□□□□ 0.54
CROCCP4-201ENST00000457096 CCAR1Q8IX12 1150 aaKnown RBP18.43■□□□□ 0.54
CROCCP4-201ENST00000457096 STK11IPQ8N1F8 1099 aa18.43■□□□□ 0.54
CROCCP4-201ENST00000457096 HTATIP2Q9BUP3 242 aa18.43■□□□□ 0.54
CROCCP4-201ENST00000457096 HMX1Q9NP08 348 aaPredicted RBP18.43■□□□□ 0.54
CROCCP4-201ENST00000457096 RABGAP1Q9Y3P9 1069 aa18.43■□□□□ 0.54
CROCCP4-201ENST00000457096 RPTORQ8N122 1335 aa18.43■□□□□ 0.54
CROCCP4-201ENST00000457096 CCND3P30281 292 aaPredicted RBP18.42■□□□□ 0.54
CROCCP4-201ENST00000457096 MNX1P50219 401 aaPredicted RBP18.42■□□□□ 0.54
CROCCP4-201ENST00000457096 CACNB2Q08289 660 aaPredicted RBP18.42■□□□□ 0.54
CROCCP4-201ENST00000457096 SAMD1Q6SPF0 538 aaPredicted RBP18.42■□□□□ 0.54
CROCCP4-201ENST00000457096 SPICE1Q8N0Z3 855 aa18.42■□□□□ 0.54
CROCCP4-201ENST00000457096 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.42■□□□□ 0.54
CROCCP4-201ENST00000457096 CHMP4BQ9H444 224 aaKnown RBP18.42■□□□□ 0.54
CROCCP4-201ENST00000457096 CWC22Q9HCG8 908 aaKnown RBP18.42■□□□□ 0.54
CROCCP4-201ENST00000457096 FLRT1Q9NZU1 646 aa18.42■□□□□ 0.54
CROCCP4-201ENST00000457096 RBM27Q9P2N5 1060 aaKnown RBP18.42■□□□□ 0.54
CROCCP4-201ENST00000457096 SLC4A4Q9Y6R1 1079 aa18.42■□□□□ 0.54
CROCCP4-201ENST00000457096 BAZ2AQ9UIF9 1905 aaKnown RBP18.42■□□□□ 0.54
CROCCP4-201ENST00000457096 ZKSCAN1P17029 563 aaPredicted RBP18.41■□□□□ 0.54
CROCCP4-201ENST00000457096 CDK8P49336 464 aa18.41■□□□□ 0.54
CROCCP4-201ENST00000457096 MAP3K21Q5TCX8 1036 aa18.41■□□□□ 0.54
CROCCP4-201ENST00000457096 C12orf60Q5U649 245 aa18.41■□□□□ 0.54
CROCCP4-201ENST00000457096 SOCS4Q8WXH5 440 aa18.41■□□□□ 0.54
CROCCP4-201ENST00000457096 PCDHB15Q9Y5E8 787 aa18.41■□□□□ 0.54
CROCCP4-201ENST00000457096 RGS2P41220 211 aa18.4■□□□□ 0.54
CROCCP4-201ENST00000457096 UBE3CQ15386 1083 aa18.4■□□□□ 0.54
CROCCP4-201ENST00000457096 CTR9Q6PD62 1173 aa18.4■□□□□ 0.54
CROCCP4-201ENST00000457096 OTUD7AQ8TE49 926 aaPredicted RBP18.4■□□□□ 0.54
CROCCP4-201ENST00000457096 TANGO6Q9C0B7 1094 aa18.4■□□□□ 0.54
CROCCP4-201ENST00000457096 DCTPP1Q9H773 170 aa18.4■□□□□ 0.54
CROCCP4-201ENST00000457096 ATP8A2Q9NTI2 1148 aa18.4■□□□□ 0.54
CROCCP4-201ENST00000457096 ECHDC1Q9NTX5 307 aa18.4■□□□□ 0.54
CROCCP4-201ENST00000457096 EVI5O60447 810 aa18.39■□□□□ 0.53
CROCCP4-201ENST00000457096 MAP2K5Q13163 448 aa18.39■□□□□ 0.53
CROCCP4-201ENST00000457096 TMEM179Q6ZVK1 233 aa18.39■□□□□ 0.53
CROCCP4-201ENST00000457096 NPLOC4Q8TAT6 608 aa18.39■□□□□ 0.53
CROCCP4-201ENST00000457096 GTF3C2Q8WUA4 911 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms