RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 STAP2Q9UGK3 403 aa8.61□□□□□ -1.03
COMMD3-204ENST00000456711 USP3Q9Y6I4 520 aa8.61□□□□□ -1.03
COMMD3-204ENST00000456711 UBR2Q8IWV8 1755 aa8.61□□□□□ -1.03
COMMD3-204ENST00000456711 SYNGAP1Q96PV0 1343 aa8.6□□□□□ -1.03
COMMD3-204ENST00000456711 PRAMEF22A3QJZ6 481 aa8.6□□□□□ -1.03
COMMD3-204ENST00000456711 UBE2Q2LH0YL09 131 aa8.6□□□□□ -1.03
COMMD3-204ENST00000456711 ADH7P40394 386 aa8.6□□□□□ -1.03
COMMD3-204ENST00000456711 EIF4A2Q14240 407 aaKnown RBP8.6□□□□□ -1.03
COMMD3-204ENST00000456711 CLEC4GQ6UXB4 293 aa8.6□□□□□ -1.03
COMMD3-204ENST00000456711 NPM2Q86SE8 214 aaKnown RBP8.6□□□□□ -1.03
COMMD3-204ENST00000456711 SLC51AQ86UW1 340 aa8.6□□□□□ -1.03
COMMD3-204ENST00000456711 MUC3AQ02505 3323 aa8.6□□□□□ -1.03
COMMD3-204ENST00000456711 TMEM265A0A087WTH1 108 aa8.59□□□□□ -1.03
COMMD3-204ENST00000456711 MAP3K12Q12852 859 aa8.59□□□□□ -1.03
COMMD3-204ENST00000456711 LRIT3Q3SXY7 679 aa8.59□□□□□ -1.03
COMMD3-204ENST00000456711 MOB2Q70IA6 237 aa8.59□□□□□ -1.03
COMMD3-204ENST00000456711 UBE2Q1Q7Z7E8 422 aa8.59□□□□□ -1.03
COMMD3-204ENST00000456711 SUPT20HQ8NEM7 779 aa8.59□□□□□ -1.03
COMMD3-204ENST00000456711 SHISA4Q96DD7 197 aa8.59□□□□□ -1.03
COMMD3-204ENST00000456711 GGA3Q9NZ52 723 aa8.59□□□□□ -1.03
COMMD3-204ENST00000456711 TCERG1O14776 1098 aaKnown RBP8.58□□□□□ -1.04
COMMD3-204ENST00000456711 INHAP05111 366 aa8.58□□□□□ -1.04
COMMD3-204ENST00000456711 TAL1P17542 331 aaPredicted RBP8.58□□□□□ -1.04
COMMD3-204ENST00000456711 HOXA10P31260 410 aaPredicted RBP8.58□□□□□ -1.04
COMMD3-204ENST00000456711 SSTR4P31391 388 aa8.58□□□□□ -1.04
COMMD3-204ENST00000456711 BMP8BP34820 402 aa8.58□□□□□ -1.04
COMMD3-204ENST00000456711 SMTNP53814 917 aa8.58□□□□□ -1.04
COMMD3-204ENST00000456711 GDF10P55107 478 aa8.58□□□□□ -1.04
COMMD3-204ENST00000456711 RAB44Q7Z6P3 723 aaPredicted RBP8.58□□□□□ -1.04
COMMD3-204ENST00000456711 ZNF592Q92610 1267 aa8.58□□□□□ -1.04
COMMD3-204ENST00000456711 RTFDC1Q9BY42 306 aaPredicted RBP8.58□□□□□ -1.04
COMMD3-204ENST00000456711 ZDHHC3Q9NYG2 299 aa8.58□□□□□ -1.04
COMMD3-204ENST00000456711 PTCH2Q9Y6C5 1203 aa8.58□□□□□ -1.04
COMMD3-204ENST00000456711 KIF7Q2M1P5 1343 aa8.57□□□□□ -1.04
COMMD3-204ENST00000456711 EYSQ5T1H1 3165 aa8.57□□□□□ -1.04
COMMD3-204ENST00000456711 RIC1Q4ADV7 1423 aa8.57□□□□□ -1.04
COMMD3-204ENST00000456711 YDJCA8MPS7 323 aa8.57□□□□□ -1.04
COMMD3-204ENST00000456711 IRAK1P51617 712 aa8.57□□□□□ -1.04
COMMD3-204ENST00000456711 INHBEP58166 350 aa8.57□□□□□ -1.04
COMMD3-204ENST00000456711 CAP1Q01518 475 aa8.57□□□□□ -1.04
COMMD3-204ENST00000456711 KIAA2012Q0VF49 1180 aa8.57□□□□□ -1.04
COMMD3-204ENST00000456711 SFSWAPQ12872 951 aaKnown RBP8.57□□□□□ -1.04
COMMD3-204ENST00000456711 RPGRQ92834 1020 aaKnown RBP8.57□□□□□ -1.04
COMMD3-204ENST00000456711 L3MBTL2Q969R5 705 aa8.57□□□□□ -1.04
COMMD3-204ENST00000456711 TEX13AQ9BXU3 409 aaPredicted RBP8.57□□□□□ -1.04
COMMD3-204ENST00000456711 TMX4Q9H1E5 349 aaPredicted RBP8.57□□□□□ -1.04
COMMD3-204ENST00000456711 LGR6Q9HBX8 967 aa8.57□□□□□ -1.04
COMMD3-204ENST00000456711 IQSEC3Q9UPP2 1182 aaPredicted RBP8.57□□□□□ -1.04
COMMD3-204ENST00000456711 NIP7Q9Y221 180 aaKnown RBP eCLIP8.57□□□□□ -1.04
COMMD3-204ENST00000456711 ZNF652Q9Y2D9 606 aa8.57□□□□□ -1.04
COMMD3-204ENST00000456711 ZNF646O15015 1829 aaPredicted RBP8.57□□□□□ -1.04
COMMD3-204ENST00000456711 FAM177BA6PVY3 158 aa8.56□□□□□ -1.04
COMMD3-204ENST00000456711 SP3Q02447 781 aa8.56□□□□□ -1.04
COMMD3-204ENST00000456711 KIF4BQ2VIQ3 1234 aa8.56□□□□□ -1.04
COMMD3-204ENST00000456711 GUCD1Q96NT3 240 aa8.56□□□□□ -1.04
COMMD3-204ENST00000456711 CRAMP1Q96RY5 1269 aa8.56□□□□□ -1.04
COMMD3-204ENST00000456711 GDF15Q99988 308 aa8.56□□□□□ -1.04
COMMD3-204ENST00000456711 RNF114Q9Y508 228 aa8.56□□□□□ -1.04
COMMD3-204ENST00000456711 ASTN2O75129 1339 aaPredicted RBP8.55□□□□□ -1.04
COMMD3-204ENST00000456711 MANSC4A6NHS7 340 aaPredicted RBP8.55□□□□□ -1.04
COMMD3-204ENST00000456711 PSMD14O00487 310 aa8.55□□□□□ -1.04
COMMD3-204ENST00000456711 A1BGP04217 495 aa8.55□□□□□ -1.04
COMMD3-204ENST00000456711 RPS12P25398 132 aaKnown RBP8.55□□□□□ -1.04
COMMD3-204ENST00000456711 USP4Q13107 963 aa8.55□□□□□ -1.04
COMMD3-204ENST00000456711 TCIRG1Q13488 830 aa8.55□□□□□ -1.04
COMMD3-204ENST00000456711 SH3TC2Q8TF17 1288 aa8.55□□□□□ -1.04
COMMD3-204ENST00000456711 RBM17Q96I25 401 aaKnown RBP8.55□□□□□ -1.04
COMMD3-204ENST00000456711 POLKQ9UBT6 870 aa8.55□□□□□ -1.04
COMMD3-204ENST00000456711 ATP6V0A2Q9Y487 856 aa8.55□□□□□ -1.04
COMMD3-204ENST00000456711 OAS3Q9Y6K5 1087 aaKnown RBP8.55□□□□□ -1.04
COMMD3-204ENST00000456711 LAMB1P07942 1786 aa8.54□□□□□ -1.04
COMMD3-204ENST00000456711 ABCC12Q96J65 1359 aa8.54□□□□□ -1.04
COMMD3-204ENST00000456711 LILRB5O75023 590 aa8.54□□□□□ -1.04
COMMD3-204ENST00000456711 TXLNAP40222 546 aa8.54□□□□□ -1.04
COMMD3-204ENST00000456711 TNNT2P45379 298 aaPredicted RBP8.54□□□□□ -1.04
COMMD3-204ENST00000456711 CRHR2Q13324 411 aa8.54□□□□□ -1.04
COMMD3-204ENST00000456711 ARHGEF6Q15052 776 aa8.54□□□□□ -1.04
COMMD3-204ENST00000456711 ANGEL2Q5VTE6 544 aaKnown RBP8.54□□□□□ -1.04
COMMD3-204ENST00000456711 ZNF496Q96IT1 587 aaPredicted RBP8.54□□□□□ -1.04
COMMD3-204ENST00000456711 SERTAD1Q9UHV2 236 aa8.54□□□□□ -1.04
COMMD3-204ENST00000456711 DOLKQ9UPQ8 538 aa8.54□□□□□ -1.04
COMMD3-204ENST00000456711 TTC28Q96AY4 2481 aa8.54□□□□□ -1.04
COMMD3-204ENST00000456711 PRUNE2Q8WUY3 3088 aa8.53□□□□□ -1.04
COMMD3-204ENST00000456711 HEG1Q9ULI3 1381 aa8.53□□□□□ -1.04
COMMD3-204ENST00000456711 IGF2BP3O00425 579 aaKnown RBP eCLIP8.53□□□□□ -1.04
COMMD3-204ENST00000456711 RNMTO43148 476 aaKnown RBP8.53□□□□□ -1.04
COMMD3-204ENST00000456711 RAC1P63000 192 aa8.53□□□□□ -1.04
COMMD3-204ENST00000456711 FAM109BQ6ICB4 259 aaPredicted RBP8.53□□□□□ -1.04
COMMD3-204ENST00000456711 DPP8Q6V1X1 898 aaPredicted RBP8.53□□□□□ -1.04
COMMD3-204ENST00000456711 LRRC69Q6ZNQ3 347 aa8.53□□□□□ -1.04
COMMD3-204ENST00000456711 TDHQ8IZJ6 230 aa8.53□□□□□ -1.04
COMMD3-204ENST00000456711 TTC5Q8N0Z6 440 aa8.53□□□□□ -1.04
COMMD3-204ENST00000456711 IRS2Q9Y4H2 1338 aa8.53□□□□□ -1.04
COMMD3-204ENST00000456711 GJA8P48165 433 aa8.52□□□□□ -1.05
COMMD3-204ENST00000456711 CD97P48960 835 aa8.52□□□□□ -1.05
COMMD3-204ENST00000456711 PTPN12Q05209 780 aaKnown RBP8.52□□□□□ -1.05
COMMD3-204ENST00000456711 TMEM259Q4ZIN3 620 aa8.52□□□□□ -1.05
COMMD3-204ENST00000456711 OXLD1Q5BKU9 147 aa8.52□□□□□ -1.05
COMMD3-204ENST00000456711 AEBP1Q8IUX7 1158 aa8.52□□□□□ -1.05
COMMD3-204ENST00000456711 FMR1NBQ8N0W7 255 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms