RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	BRI3BP	Q8WY22	251 aa		11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	DDRGK1	Q96HY6	314 aa		11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	FAM227B	Q96M60	508 aa		11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	CFHR5	Q9BXR6	569 aa		11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	PICK1	Q9NRD5	415 aa		11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	AFG3L2	Q9Y4W6	797 aa		11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	ZHX2	Q9Y6X8	837 aa		11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	CYP2D7	A0A087X1C5	515 aa		11.9	□□□□□ -0.5
CHEK2-221	ENST00000456369		A0A0D9SFI3	127 aa		11.9	□□□□□ -0.5
CHEK2-221	ENST00000456369	TRIM6-TRIM34	B2RNG4	842 aa		11.9	□□□□□ -0.5
CHEK2-221	ENST00000456369	PATL2	C9JE40	543 aa	Known RBP	11.9	□□□□□ -0.5
CHEK2-221	ENST00000456369	POLR3D	P05423	398 aa	Predicted RBP	11.9	□□□□□ -0.5
CHEK2-221	ENST00000456369	SDS	P20132	328 aa		11.9	□□□□□ -0.5
CHEK2-221	ENST00000456369	CTCF	P49711	727 aa	Predicted RBP	11.9	□□□□□ -0.5
CHEK2-221	ENST00000456369	SNAPC2	Q13487	334 aa		11.9	□□□□□ -0.5
CHEK2-221	ENST00000456369	SBK1	Q52WX2	424 aa		11.9	□□□□□ -0.5
CHEK2-221	ENST00000456369	BMP2KL	Q5H9B9	411 aa		11.9	□□□□□ -0.5
CHEK2-221	ENST00000456369	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.9	□□□□□ -0.5
CHEK2-221	ENST00000456369	RILPL2	Q969X0	211 aa		11.9	□□□□□ -0.5
CHEK2-221	ENST00000456369	IPO9	Q96P70	1041 aa	Known RBP	11.9	□□□□□ -0.5
CHEK2-221	ENST00000456369	BEGAIN	Q9BUH8	593 aa		11.9	□□□□□ -0.5
CHEK2-221	ENST00000456369	HELLS	Q9NRZ9	838 aa		11.9	□□□□□ -0.5
CHEK2-221	ENST00000456369	TSKS	Q9UJT2	592 aa		11.9	□□□□□ -0.5
CHEK2-221	ENST00000456369	CDK5RAP2	Q96SN8	1893 aa		11.89	□□□□□ -0.51
CHEK2-221	ENST00000456369	CXCL11	O14625	94 aa		11.89	□□□□□ -0.51
CHEK2-221	ENST00000456369	TRPA1	O75762	1119 aa		11.89	□□□□□ -0.51
CHEK2-221	ENST00000456369	CETP	P11597	493 aa		11.89	□□□□□ -0.51
CHEK2-221	ENST00000456369	LBX1	P52954	281 aa		11.89	□□□□□ -0.51
CHEK2-221	ENST00000456369	MCMDC2	Q4G0Z9	681 aa		11.89	□□□□□ -0.51
CHEK2-221	ENST00000456369	CCDC129	Q6ZRS4	1044 aa		11.89	□□□□□ -0.51
CHEK2-221	ENST00000456369	CCDC84	Q86UT8	332 aa	Predicted RBP	11.89	□□□□□ -0.51
CHEK2-221	ENST00000456369	IFNL3	Q8IZI9	196 aa		11.89	□□□□□ -0.51
CHEK2-221	ENST00000456369	SLC44A5	Q8NCS7	719 aa		11.89	□□□□□ -0.51
CHEK2-221	ENST00000456369	GINM1	Q9NU53	330 aa		11.89	□□□□□ -0.51
CHEK2-221	ENST00000456369	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.89	□□□□□ -0.51
CHEK2-221	ENST00000456369	LAMB1	P07942	1786 aa		11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369	CCL15-CCL14	A0A0B4J2E2	113 aa		11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369		A0A0G2JLL6	359 aa	Predicted RBP	11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369	SLC34A2	O95436	690 aa		11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369	ALDH1A1	P00352	501 aa		11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369	ASNS	P08243	561 aa		11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369	NMI	Q13287	307 aa	Predicted RBP	11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369	CCL15	Q16663	113 aa		11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369	VPS53	Q5VIR6	699 aa		11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369	FAM43A	Q8N2R8	423 aa		11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369	DYNLL2	Q96FJ2	89 aa		11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369	WDR18	Q9BV38	432 aa		11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369	TRIM34	Q9BYJ4	488 aa		11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369	R3HDML	Q9H3Y0	253 aa		11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369	UPF2	Q9HAU5	1272 aa	Known RBP	11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369	PRDM10	Q9NQV6	1147 aa		11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369	SWAP70	Q9UH65	585 aa		11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369	ZBTB21	Q9ULJ3	1066 aa		11.88	□□□□□ -0.51
CHEK2-221	ENST00000456369	USP17L5	A8MUK1	530 aa		11.87	□□□□□ -0.51
CHEK2-221	ENST00000456369	BTBD19	C9JJ37	291 aa		11.87	□□□□□ -0.51
CHEK2-221	ENST00000456369	ST18	O60284	1047 aa		11.87	□□□□□ -0.51
CHEK2-221	ENST00000456369	GDF11	O95390	407 aa		11.87	□□□□□ -0.51
CHEK2-221	ENST00000456369	TBC1D8	O95759	1140 aa		11.87	□□□□□ -0.51
CHEK2-221	ENST00000456369	GH2	P01242	217 aa		11.87	□□□□□ -0.51
CHEK2-221	ENST00000456369	GUCY1A2	P33402	732 aa		11.87	□□□□□ -0.51
CHEK2-221	ENST00000456369	E2F4	Q16254	413 aa		11.87	□□□□□ -0.51
CHEK2-221	ENST00000456369	CERKL	Q49MI3	558 aa	Predicted RBP	11.87	□□□□□ -0.51
CHEK2-221	ENST00000456369	GPAT2	Q6NUI2	795 aa		11.87	□□□□□ -0.51
CHEK2-221	ENST00000456369	C16orf86	Q6ZW13	317 aa		11.87	□□□□□ -0.51
CHEK2-221	ENST00000456369	ZNF280C	Q8ND82	737 aa		11.87	□□□□□ -0.51
CHEK2-221	ENST00000456369	TBC1D2	Q9BYX2	928 aa		11.87	□□□□□ -0.51
CHEK2-221	ENST00000456369	ZCCHC17	Q9NP64	241 aa	Known RBP	11.87	□□□□□ -0.51
CHEK2-221	ENST00000456369	ROBO3	Q96MS0	1386 aa		11.87	□□□□□ -0.51
CHEK2-221	ENST00000456369	TRIM75P	A6NK02	468 aa		11.86	□□□□□ -0.51
CHEK2-221	ENST00000456369	APP	P05067	770 aa		11.86	□□□□□ -0.51
CHEK2-221	ENST00000456369	CDK8	P49336	464 aa		11.86	□□□□□ -0.51
CHEK2-221	ENST00000456369	SPP2	Q13103	211 aa		11.86	□□□□□ -0.51
CHEK2-221	ENST00000456369	ALX1	Q15699	326 aa		11.86	□□□□□ -0.51
CHEK2-221	ENST00000456369	NOM1	Q5C9Z4	860 aa	Known RBP	11.86	□□□□□ -0.51
CHEK2-221	ENST00000456369	ANKRD23	Q86SG2	305 aa		11.86	□□□□□ -0.51
CHEK2-221	ENST00000456369	NACAP1	Q9BZK3	213 aa		11.86	□□□□□ -0.51
CHEK2-221	ENST00000456369	IL25	Q9H293	177 aa		11.86	□□□□□ -0.51
CHEK2-221	ENST00000456369	MYH7	P12883	1935 aa		11.86	□□□□□ -0.51
CHEK2-221	ENST00000456369	HIP1	O00291	1037 aa		11.85	□□□□□ -0.51
CHEK2-221	ENST00000456369	HSPD1	P10809	573 aa	Known RBP	11.85	□□□□□ -0.51
CHEK2-221	ENST00000456369	TDO2	P48775	406 aa		11.85	□□□□□ -0.51
CHEK2-221	ENST00000456369	CRHR2	Q13324	411 aa		11.85	□□□□□ -0.51
CHEK2-221	ENST00000456369	ABCB5	Q2M3G0	1257 aa		11.85	□□□□□ -0.51
CHEK2-221	ENST00000456369	ARSI	Q5FYB1	569 aa		11.85	□□□□□ -0.51
CHEK2-221	ENST00000456369	SH3D19	Q5HYK7	790 aa		11.85	□□□□□ -0.51
CHEK2-221	ENST00000456369	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.85	□□□□□ -0.51
CHEK2-221	ENST00000456369	OTUD7B	Q6GQQ9	843 aa		11.85	□□□□□ -0.51
CHEK2-221	ENST00000456369	CWC27	Q6UX04	472 aa	Known RBP	11.85	□□□□□ -0.51
CHEK2-221	ENST00000456369	FASTKD5	Q7L8L6	764 aa	Known RBP	11.85	□□□□□ -0.51
CHEK2-221	ENST00000456369	AMOTL1	Q8IY63	956 aa		11.85	□□□□□ -0.51
CHEK2-221	ENST00000456369	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
CHEK2-221	ENST00000456369	ZSWIM6	Q9HCJ5	1215 aa		11.85	□□□□□ -0.51
CHEK2-221	ENST00000456369	CCDC171	Q6TFL3	1326 aa		11.85	□□□□□ -0.51
CHEK2-221	ENST00000456369	MINDY4B	A8MYZ0	360 aa		11.84	□□□□□ -0.51
CHEK2-221	ENST00000456369	FGA	P02671	866 aa		11.84	□□□□□ -0.51
CHEK2-221	ENST00000456369	AKR1B1	P15121	316 aa		11.84	□□□□□ -0.51
CHEK2-221	ENST00000456369	CHML	P26374	656 aa		11.84	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms