RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 PDE4BQ07343 736 aa8.41□□□□□ -1.06
COMMD1-205ENST00000455659 MOGSQ13724 837 aa8.41□□□□□ -1.06
COMMD1-205ENST00000455659 SEPT2Q15019 361 aa8.41□□□□□ -1.06
COMMD1-205ENST00000455659 ZYXQ15942 572 aaKnown RBP8.41□□□□□ -1.06
COMMD1-205ENST00000455659 BMP2KLQ5H9B9 411 aa8.41□□□□□ -1.06
COMMD1-205ENST00000455659 TREML2Q5T2D2 321 aa8.41□□□□□ -1.06
COMMD1-205ENST00000455659 ERICH6BQ5W0A0 696 aa8.41□□□□□ -1.06
COMMD1-205ENST00000455659 SMCR8Q8TEV9 937 aaPredicted RBP8.41□□□□□ -1.06
COMMD1-205ENST00000455659 ZNF296Q8WUU4 475 aaPredicted RBP8.41□□□□□ -1.06
COMMD1-205ENST00000455659 CCDC17Q96LX7 622 aa8.41□□□□□ -1.06
COMMD1-205ENST00000455659 WDR18Q9BV38 432 aa8.41□□□□□ -1.06
COMMD1-205ENST00000455659 IL25Q9H293 177 aa8.41□□□□□ -1.06
COMMD1-205ENST00000455659 SH2D4AQ9H788 454 aa8.41□□□□□ -1.06
COMMD1-205ENST00000455659 MKNK2Q9HBH9 465 aa8.41□□□□□ -1.06
COMMD1-205ENST00000455659 ZNF287Q9HBT7 754 aa8.41□□□□□ -1.06
COMMD1-205ENST00000455659 ZFYVE28Q9HCC9 887 aa8.41□□□□□ -1.06
COMMD1-205ENST00000455659 PPP4R2Q9NY27 417 aa8.41□□□□□ -1.06
COMMD1-205ENST00000455659 PNMA3Q9UL41 463 aa8.41□□□□□ -1.06
COMMD1-205ENST00000455659 RLFQ13129 1914 aa8.41□□□□□ -1.06
COMMD1-205ENST00000455659 GPR25O00155 361 aa8.4□□□□□ -1.06
COMMD1-205ENST00000455659 PRDM1O75626 825 aa8.4□□□□□ -1.06
COMMD1-205ENST00000455659 VCAM1P19320 739 aa8.4□□□□□ -1.06
COMMD1-205ENST00000455659 RASA1P20936 1047 aa8.4□□□□□ -1.06
COMMD1-205ENST00000455659 BACE1P56817 501 aa8.4□□□□□ -1.06
COMMD1-205ENST00000455659 HAND2P61296 217 aa8.4□□□□□ -1.06
COMMD1-205ENST00000455659 IRX3P78415 501 aaPredicted RBP8.4□□□□□ -1.06
COMMD1-205ENST00000455659 PABPC4Q13310 644 aaKnown RBP eCLIP8.4□□□□□ -1.067e-6■■□□□ 14.2
COMMD1-205ENST00000455659 NOM1Q5C9Z4 860 aaKnown RBP8.4□□□□□ -1.06
COMMD1-205ENST00000455659 GPAT2Q6NUI2 795 aa8.4□□□□□ -1.06
COMMD1-205ENST00000455659 USP17L2Q6R6M4 530 aa8.4□□□□□ -1.06
COMMD1-205ENST00000455659 RUFY2Q8WXA3 655 aa8.4□□□□□ -1.06
COMMD1-205ENST00000455659 R3HDMLQ9H3Y0 253 aa8.4□□□□□ -1.06
COMMD1-205ENST00000455659 ARHGEF10LQ9HCE6 1279 aa8.4□□□□□ -1.06
COMMD1-205ENST00000455659 SLC45A1Q9Y2W3 748 aa8.4□□□□□ -1.06
COMMD1-205ENST00000455659 DOCK3Q8IZD9 2030 aa8.4□□□□□ -1.06
COMMD1-205ENST00000455659 PLXNB2O15031 1838 aa8.4□□□□□ -1.07
COMMD1-205ENST00000455659 NEDD4P46934 1319 aa8.39□□□□□ -1.07
COMMD1-205ENST00000455659 C19orf81C9J6K1 198 aa8.39□□□□□ -1.07
COMMD1-205ENST00000455659 TLR2O60603 784 aa8.39□□□□□ -1.07
COMMD1-205ENST00000455659 FKTNO75072 461 aa8.39□□□□□ -1.07
COMMD1-205ENST00000455659 TSPY3P0CV98 308 aa8.39□□□□□ -1.07
COMMD1-205ENST00000455659 TSPY8P0CW00 308 aa8.39□□□□□ -1.07
COMMD1-205ENST00000455659 CYP2C8P10632 490 aa8.39□□□□□ -1.07
COMMD1-205ENST00000455659 CHMLP26374 656 aa8.39□□□□□ -1.07
COMMD1-205ENST00000455659 USP14P54578 494 aa8.39□□□□□ -1.07
COMMD1-205ENST00000455659 ATP2B2Q01814 1243 aa8.39□□□□□ -1.07
COMMD1-205ENST00000455659 CTDSPL2Q05D32 466 aa8.39□□□□□ -1.07
COMMD1-205ENST00000455659 ALX1Q15699 326 aa8.39□□□□□ -1.07
COMMD1-205ENST00000455659 SH3D19Q5HYK7 790 aa8.39□□□□□ -1.07
COMMD1-205ENST00000455659 COL13A1Q5TAT6 717 aaPredicted RBP8.39□□□□□ -1.07
COMMD1-205ENST00000455659 TBC1D10CQ8IV04 446 aa8.39□□□□□ -1.07
COMMD1-205ENST00000455659 ACER1Q8TDN7 264 aa8.39□□□□□ -1.07
COMMD1-205ENST00000455659 C12orf42Q96LP6 360 aa8.39□□□□□ -1.07
COMMD1-205ENST00000455659 DSCC1Q9BVC3 393 aa8.39□□□□□ -1.07
COMMD1-205ENST00000455659 KIAA1683Q9H0B3 1180 aa8.39□□□□□ -1.07
COMMD1-205ENST00000455659 TOMM22Q9NS69 142 aa8.39□□□□□ -1.07
COMMD1-205ENST00000455659 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.39□□□□□ -1.07
COMMD1-205ENST00000455659 TSPY2A6NKD2 308 aa8.38□□□□□ -1.07
COMMD1-205ENST00000455659 FGAP02671 866 aa8.38□□□□□ -1.07
COMMD1-205ENST00000455659 OSBPP22059 807 aa8.38□□□□□ -1.07
COMMD1-205ENST00000455659 RRP12Q5JTH9 1297 aaKnown RBP8.38□□□□□ -1.07
COMMD1-205ENST00000455659 CASC1Q6TDU7 716 aa8.38□□□□□ -1.07
COMMD1-205ENST00000455659 CTU1Q7Z7A3 348 aaKnown RBP8.38□□□□□ -1.07
COMMD1-205ENST00000455659 TNS4Q8IZW8 715 aa8.38□□□□□ -1.07
COMMD1-205ENST00000455659 ZNF444Q8N0Y2 327 aaPredicted RBP8.38□□□□□ -1.07
COMMD1-205ENST00000455659 CD99L2Q8TCZ2 262 aa8.38□□□□□ -1.07
COMMD1-205ENST00000455659 ERO1AQ96HE7 468 aa8.38□□□□□ -1.07
COMMD1-205ENST00000455659 TANGO6Q9C0B7 1094 aa8.38□□□□□ -1.07
COMMD1-205ENST00000455659 ASCC2Q9H1I8 757 aaPredicted RBP8.38□□□□□ -1.07
COMMD1-205ENST00000455659 GOPCQ9HD26 462 aa8.38□□□□□ -1.07
COMMD1-205ENST00000455659 CPA4Q9UI42 421 aa8.38□□□□□ -1.07
COMMD1-205ENST00000455659 ANAPC4Q9UJX5 808 aa8.38□□□□□ -1.07
COMMD1-205ENST00000455659 ZNF236Q9UL36 1845 aa8.38□□□□□ -1.07
COMMD1-205ENST00000455659 RBBP6Q7Z6E9 1792 aaKnown RBP8.38□□□□□ -1.07
COMMD1-205ENST00000455659 KIAA0100Q14667 2235 aaKnown RBP8.37□□□□□ -1.07
COMMD1-205ENST00000455659 A0A1W2PRG0 241 aa8.37□□□□□ -1.07
COMMD1-205ENST00000455659 SGSM2O43147 1006 aa8.37□□□□□ -1.07
COMMD1-205ENST00000455659 ORC4O43929 436 aa8.37□□□□□ -1.07
COMMD1-205ENST00000455659 RAD21O60216 631 aa8.37□□□□□ -1.07
COMMD1-205ENST00000455659 RANBP6O60518 1105 aaKnown RBP8.37□□□□□ -1.07
COMMD1-205ENST00000455659 CDC45O75419 566 aa8.37□□□□□ -1.07
COMMD1-205ENST00000455659 PCP11498 1178 aaKnown RBP8.37□□□□□ -1.07
COMMD1-205ENST00000455659 EEF2P13639 858 aaKnown RBP8.37□□□□□ -1.07
COMMD1-205ENST00000455659 SP3Q02447 781 aa8.37□□□□□ -1.07
COMMD1-205ENST00000455659 IMMTQ16891 758 aaKnown RBP8.37□□□□□ -1.07
COMMD1-205ENST00000455659 FAM110CQ1W6H9 321 aa8.37□□□□□ -1.07
COMMD1-205ENST00000455659 FAM47AQ5JRC9 791 aa8.37□□□□□ -1.07
COMMD1-205ENST00000455659 SPICE1Q8N0Z3 855 aa8.37□□□□□ -1.07
COMMD1-205ENST00000455659 LRRC47Q8N1G4 583 aaKnown RBP8.37□□□□□ -1.07
COMMD1-205ENST00000455659 STAG1Q8WVM7 1258 aa8.37□□□□□ -1.07
COMMD1-205ENST00000455659 LPAR1Q92633 364 aa8.37□□□□□ -1.07
COMMD1-205ENST00000455659 CEP95Q96GE4 821 aa8.37□□□□□ -1.07
COMMD1-205ENST00000455659 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.37□□□□□ -1.07
COMMD1-205ENST00000455659 NBPF3Q9H094 633 aa8.37□□□□□ -1.07
COMMD1-205ENST00000455659 RNF41Q9H4P4 317 aaPredicted RBP8.37□□□□□ -1.07
COMMD1-205ENST00000455659 RPAP3Q9H6T3 665 aaPredicted RBP8.37□□□□□ -1.07
COMMD1-205ENST00000455659 VCPKMTQ9H867 229 aa8.37□□□□□ -1.07
COMMD1-205ENST00000455659 KANSL2Q9H9L4 492 aa8.37□□□□□ -1.07
COMMD1-205ENST00000455659 EMILIN3Q9NT22 766 aa8.37□□□□□ -1.07
COMMD1-205ENST00000455659 TRIM17Q9Y577 477 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms