RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 USP17L22D6RA61 530 aa28.48■■■□□ 2.15
PTPRA-208ENST00000455631 USP17L17D6RBQ6 530 aa28.48■■■□□ 2.15
PTPRA-208ENST00000455631 USP17L19D6RCP7 530 aa28.48■■■□□ 2.15
PTPRA-208ENST00000455631 USP17L20D6RJB6 530 aa28.48■■■□□ 2.15
PTPRA-208ENST00000455631 DNM1LO00429 736 aa28.48■■■□□ 2.15
PTPRA-208ENST00000455631 RTP1P59025 263 aa28.48■■■□□ 2.15
PTPRA-208ENST00000455631 ATP2B2Q01814 1243 aa28.48■■■□□ 2.15
PTPRA-208ENST00000455631 USP17L24Q0WX57 530 aa28.48■■■□□ 2.15
PTPRA-208ENST00000455631 C12orf42Q96LP6 360 aa28.48■■■□□ 2.15
PTPRA-208ENST00000455631 IVNS1ABPQ9Y6Y0 642 aa28.48■■■□□ 2.15
PTPRA-208ENST00000455631 LAMA2P24043 3122 aaKnown RBP28.48■■■□□ 2.15
PTPRA-208ENST00000455631 PTPREP23469 700 aa28.47■■■□□ 2.15
PTPRA-208ENST00000455631 MYH1P12882 1939 aa28.47■■■□□ 2.15
PTPRA-208ENST00000455631 CYP2C19P33261 490 aa28.46■■■□□ 2.15
PTPRA-208ENST00000455631 ATP11BQ9Y2G3 1177 aa28.46■■■□□ 2.15
PTPRA-208ENST00000455631 NPLOC4Q8TAT6 608 aa28.45■■■□□ 2.14
PTPRA-208ENST00000455631 CDX2Q99626 313 aaPredicted RBP28.45■■■□□ 2.14
PTPRA-208ENST00000455631 RLFQ13129 1914 aa28.45■■■□□ 2.14
PTPRA-208ENST00000455631 PNMA6EA0A0J9YXQ4 647 aa28.44■■■□□ 2.14
PTPRA-208ENST00000455631 CYP2E1P05181 493 aaPredicted RBP28.44■■■□□ 2.14
PTPRA-208ENST00000455631 GRB14Q14449 540 aa28.44■■■□□ 2.14
PTPRA-208ENST00000455631 RAB3GAP1Q15042 981 aa28.44■■■□□ 2.14
PTPRA-208ENST00000455631 CCDC158Q5M9N0 1113 aa28.44■■■□□ 2.14
PTPRA-208ENST00000455631 CATSPERGQ6ZRH7 1159 aa28.44■■■□□ 2.14
PTPRA-208ENST00000455631 TRMT2AQ8IZ69 625 aaKnown RBP28.44■■■□□ 2.14
PTPRA-208ENST00000455631 PRDM5Q9NQX1 630 aaPredicted RBP28.44■■■□□ 2.14
PTPRA-208ENST00000455631 EYSQ5T1H1 3165 aa28.44■■■□□ 2.14
PTPRA-208ENST00000455631 HOXC6P09630 235 aa28.43■■■□□ 2.14
PTPRA-208ENST00000455631 VCAM1P19320 739 aa28.43■■■□□ 2.14
PTPRA-208ENST00000455631 USP14P54578 494 aa28.43■■■□□ 2.14
PTPRA-208ENST00000455631 DYNLL1P63167 89 aaKnown RBP28.43■■■□□ 2.14
PTPRA-208ENST00000455631 SHHQ15465 462 aa28.43■■■□□ 2.14
PTPRA-208ENST00000455631 GJC2Q5T442 439 aaPredicted RBP28.43■■■□□ 2.14
PTPRA-208ENST00000455631 TRPV1Q8NER1 839 aa28.43■■■□□ 2.14
PTPRA-208ENST00000455631 MAFAQ8NHW3 353 aaPredicted RBP28.43■■■□□ 2.14
PTPRA-208ENST00000455631 BTBD7Q9P203 1132 aa28.43■■■□□ 2.14
PTPRA-208ENST00000455631 GNAI2P04899 355 aa28.42■■■□□ 2.14
PTPRA-208ENST00000455631 DBNDD2Q9BQY9 259 aa28.42■■■□□ 2.14
PTPRA-208ENST00000455631 VCANP13611 3396 aa28.41■■■□□ 2.14
PTPRA-208ENST00000455631 CYBAP13498 195 aa28.41■■■□□ 2.14
PTPRA-208ENST00000455631 TNNI3KQ59H18 835 aa28.41■■■□□ 2.14
PTPRA-208ENST00000455631 C9orf50Q5SZB4 431 aa28.41■■■□□ 2.14
PTPRA-208ENST00000455631 ARHGAP45Q92619 1136 aa28.41■■■□□ 2.14
PTPRA-208ENST00000455631 KIAA1683Q9H0B3 1180 aa28.41■■■□□ 2.14
PTPRA-208ENST00000455631 FPGT-TNNI3KV9GXZ4 949 aa28.41■■■□□ 2.14
PTPRA-208ENST00000455631 KBTBD13C9JR72 458 aa28.4■■■□□ 2.14
PTPRA-208ENST00000455631 CYP7A1P22680 504 aa28.4■■■□□ 2.14
PTPRA-208ENST00000455631 USP5P45974 858 aa28.4■■■□□ 2.14
PTPRA-208ENST00000455631 TATDN1Q6P1N9 297 aa28.4■■■□□ 2.14
PTPRA-208ENST00000455631 LBX2Q6XYB7 198 aa28.4■■■□□ 2.14
PTPRA-208ENST00000455631 SEMA6BQ9H3T3 888 aa28.4■■■□□ 2.14
PTPRA-208ENST00000455631 PIH1D3Q9NQM4 214 aaKnown RBP28.4■■■□□ 2.14
PTPRA-208ENST00000455631 SERPINB13Q9UIV8 391 aa28.4■■■□□ 2.14
PTPRA-208ENST00000455631 ZNF236Q9UL36 1845 aa28.39■■■□□ 2.14
PTPRA-208ENST00000455631 SPDYE16A6NNV3 312 aaPredicted RBP28.39■■■□□ 2.14
PTPRA-208ENST00000455631 MYCNP04198 464 aaPredicted RBP28.39■■■□□ 2.14
PTPRA-208ENST00000455631 ZAP70P43403 619 aa28.39■■■□□ 2.14
PTPRA-208ENST00000455631 RARSP54136 660 aaKnown RBP28.39■■■□□ 2.14
PTPRA-208ENST00000455631 ANO1Q5XXA6 986 aa28.39■■■□□ 2.14
PTPRA-208ENST00000455631 ARRDC4Q8NCT1 418 aa28.39■■■□□ 2.14
PTPRA-208ENST00000455631 ACER1Q8TDN7 264 aa28.39■■■□□ 2.14
PTPRA-208ENST00000455631 RPAP3Q9H6T3 665 aaPredicted RBP28.39■■■□□ 2.14
PTPRA-208ENST00000455631 ZNF316A6NFI3 1004 aaPredicted RBP28.38■■■□□ 2.13
PTPRA-208ENST00000455631 OS9Q13438 667 aaPredicted RBP28.38■■■□□ 2.13
PTPRA-208ENST00000455631 ABCB5Q2M3G0 1257 aa28.38■■■□□ 2.13
PTPRA-208ENST00000455631 CERKLQ49MI3 558 aaPredicted RBP28.38■■■□□ 2.13
PTPRA-208ENST00000455631 SLC39A5Q6ZMH5 540 aa28.38■■■□□ 2.13
PTPRA-208ENST00000455631 DPP9Q86TI2 863 aa28.38■■■□□ 2.13
PTPRA-208ENST00000455631 MIGA1Q8NAN2 632 aa28.38■■■□□ 2.13
PTPRA-208ENST00000455631 BADQ92934 168 aa28.38■■■□□ 2.13
PTPRA-208ENST00000455631 TRIM60Q495X7 471 aa28.37■■■□□ 2.13
PTPRA-208ENST00000455631 MYLIPQ8WY64 445 aa28.37■■■□□ 2.13
PTPRA-208ENST00000455631 EHD4Q9H223 541 aa28.37■■■□□ 2.13
PTPRA-208ENST00000455631 GPR108Q9NPR9 543 aa28.37■■■□□ 2.13
PTPRA-208ENST00000455631 IGSF3O75054 1194 aa28.36■■■□□ 2.13
PTPRA-208ENST00000455631 CABP5Q9NP86 173 aa28.36■■■□□ 2.13
PTPRA-208ENST00000455631 IDH1O75874 414 aaKnown RBP28.35■■■□□ 2.13
PTPRA-208ENST00000455631 IGHA2P01877 340 aa28.35■■■□□ 2.13
PTPRA-208ENST00000455631 ADORA2AP29274 412 aa28.35■■■□□ 2.13
PTPRA-208ENST00000455631 OLFML2BQ68BL8 750 aa28.35■■■□□ 2.13
PTPRA-208ENST00000455631 SMAD3P84022 425 aaKnown RBP28.34■■■□□ 2.13
PTPRA-208ENST00000455631 CERS3Q8IU89 383 aa28.34■■■□□ 2.13
PTPRA-208ENST00000455631 ZNF512BQ96KM6 892 aaPredicted RBP28.34■■■□□ 2.13
PTPRA-208ENST00000455631 TTYH1Q9H313 450 aaPredicted RBP28.34■■■□□ 2.13
PTPRA-208ENST00000455631 PDLIM7Q9NR12 457 aa28.34■■■□□ 2.13
PTPRA-208ENST00000455631 SEPT4O43236 478 aa28.33■■■□□ 2.13
PTPRA-208ENST00000455631 TRIM27P14373 513 aa28.33■■■□□ 2.13
PTPRA-208ENST00000455631 FOSL2P15408 326 aa28.33■■■□□ 2.13
PTPRA-208ENST00000455631 SNX17Q15036 470 aa28.33■■■□□ 2.13
PTPRA-208ENST00000455631 TTC6Q86TZ1 520 aa28.33■■■□□ 2.13
PTPRA-208ENST00000455631 MOV10L1Q9BXT6 1211 aaKnown RBP28.33■■■□□ 2.13
PTPRA-208ENST00000455631 MAGEB6Q8N7X4 407 aa28.32■■■□□ 2.12
PTPRA-208ENST00000455631 TNNQ9UQP3 1299 aa28.32■■■□□ 2.12
PTPRA-208ENST00000455631 A0A0G2JMZ2 1700 aa28.32■■■□□ 2.12
PTPRA-208ENST00000455631 SHMT1P34896 483 aa28.31■■■□□ 2.12
PTPRA-208ENST00000455631 ADCYAP1R1P41586 468 aa28.31■■■□□ 2.12
PTPRA-208ENST00000455631 SH3RF1Q7Z6J0 888 aa28.31■■■□□ 2.12
PTPRA-208ENST00000455631 FERMT2Q96AC1 680 aa28.31■■■□□ 2.12
PTPRA-208ENST00000455631 TANGO6Q9C0B7 1094 aa28.31■■■□□ 2.12
PTPRA-208ENST00000455631 PRDM6Q9NQX0 595 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms