RNA–Protein interactions for RNA: ENST00000455240.1

PTPA-225, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-225ENST00000455240 MIER1Q8N108 512 aa19.65■□□□□ 0.74
PTPA-225ENST00000455240 RIOK1Q9BRS2 568 aaKnown RBP19.65■□□□□ 0.74
PTPA-225ENST00000455240 KIAA1683Q9H0B3 1180 aa19.65■□□□□ 0.74
PTPA-225ENST00000455240 IL1RAPL2Q9NP60 686 aa19.65■□□□□ 0.74
PTPA-225ENST00000455240 ZBED9Q6R2W3 1325 aa19.65■□□□□ 0.74
PTPA-225ENST00000455240 USP17L15C9J2P7 530 aa19.64■□□□□ 0.73
PTPA-225ENST00000455240 USP17L13C9JLJ4 530 aa19.64■□□□□ 0.73
PTPA-225ENST00000455240 USP17L11C9JVI0 530 aa19.64■□□□□ 0.73
PTPA-225ENST00000455240 USP17L18D6R9N7 530 aa19.64■□□□□ 0.73
PTPA-225ENST00000455240 USP17L22D6RA61 530 aa19.64■□□□□ 0.73
PTPA-225ENST00000455240 USP17L17D6RBQ6 530 aa19.64■□□□□ 0.73
PTPA-225ENST00000455240 USP17L19D6RCP7 530 aa19.64■□□□□ 0.73
PTPA-225ENST00000455240 USP17L20D6RJB6 530 aa19.64■□□□□ 0.73
PTPA-225ENST00000455240 SHMT1P34896 483 aa19.64■□□□□ 0.73
PTPA-225ENST00000455240 USP17L24Q0WX57 530 aa19.64■□□□□ 0.73
PTPA-225ENST00000455240 TTF1Q15361 905 aaPredicted RBP19.64■□□□□ 0.73
PTPA-225ENST00000455240 C7orf61Q8IZ16 206 aa19.64■□□□□ 0.73
PTPA-225ENST00000455240 RHPN1Q8TCX5 695 aa19.64■□□□□ 0.73
PTPA-225ENST00000455240 APBA2Q99767 749 aa19.64■□□□□ 0.73
PTPA-225ENST00000455240 C11orf49Q9H6J7 331 aa19.64■□□□□ 0.73
PTPA-225ENST00000455240 RABGAP1Q9Y3P9 1069 aa19.64■□□□□ 0.73
PTPA-225ENST00000455240 MAGEB6P1A0A0J9YX57 407 aa19.63■□□□□ 0.73
PTPA-225ENST00000455240 VCAM1P19320 739 aa19.63■□□□□ 0.73
PTPA-225ENST00000455240 PLCD1P51178 756 aa19.63■□□□□ 0.73
PTPA-225ENST00000455240 CCNA1P78396 465 aa19.63■□□□□ 0.73
PTPA-225ENST00000455240 ACER1Q8TDN7 264 aa19.63■□□□□ 0.73
PTPA-225ENST00000455240 CWC22Q9HCG8 908 aaKnown RBP19.63■□□□□ 0.73
PTPA-225ENST00000455240 CABP5Q9NP86 173 aa19.63■□□□□ 0.73
PTPA-225ENST00000455240 CNMDO75829 334 aa19.62■□□□□ 0.73
PTPA-225ENST00000455240 PDE6AP16499 860 aa19.62■□□□□ 0.73
PTPA-225ENST00000455240 CACNB2Q08289 660 aaPredicted RBP19.62■□□□□ 0.73
PTPA-225ENST00000455240 CCL14Q16627 93 aa19.62■□□□□ 0.73
PTPA-225ENST00000455240 CATSPERGQ6ZRH7 1159 aa19.62■□□□□ 0.73
PTPA-225ENST00000455240 CRNKL1Q9BZJ0 848 aaKnown RBP19.62■□□□□ 0.73
PTPA-225ENST00000455240 STAP2Q9UGK3 403 aa19.62■□□□□ 0.73
PTPA-225ENST00000455240 POLR3DP05423 398 aaPredicted RBP19.61■□□□□ 0.73
PTPA-225ENST00000455240 MS4A1P11836 297 aa19.61■□□□□ 0.73
PTPA-225ENST00000455240 GABPAQ06546 454 aa19.61■□□□□ 0.73
PTPA-225ENST00000455240 SLC9C2Q5TAH2 1124 aa19.61■□□□□ 0.73
PTPA-225ENST00000455240 LBX2Q6XYB7 198 aa19.61■□□□□ 0.73
PTPA-225ENST00000455240 CLASRPQ8N2M8 674 aaKnown RBP19.61■□□□□ 0.73
PTPA-225ENST00000455240 KIF1BPQ96EK5 621 aa19.61■□□□□ 0.73
PTPA-225ENST00000455240 FRMPD3Q5JV73 1810 aa19.6■□□□□ 0.73
PTPA-225ENST00000455240 GLRX3O76003 335 aaKnown RBP19.6■□□□□ 0.73
PTPA-225ENST00000455240 GUCY1A2P33402 732 aa19.6■□□□□ 0.73
PTPA-225ENST00000455240 MAP2K5Q13163 448 aa19.6■□□□□ 0.73
PTPA-225ENST00000455240 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.6■□□□□ 0.73
PTPA-225ENST00000455240 GDF15Q99988 308 aa19.6■□□□□ 0.73
PTPA-225ENST00000455240 MCM9Q9NXL9 1143 aa19.6■□□□□ 0.73
PTPA-225ENST00000455240 ZMYND8Q9ULU4 1186 aaPredicted RBP19.6■□□□□ 0.73
PTPA-225ENST00000455240 LAMA3Q16787 3333 aa19.6■□□□□ 0.73
PTPA-225ENST00000455240 PFASO15067 1338 aa19.59■□□□□ 0.73
PTPA-225ENST00000455240 ZNF532Q9HCE3 1301 aa19.59■□□□□ 0.73
PTPA-225ENST00000455240 APBB1O00213 710 aa19.59■□□□□ 0.73
PTPA-225ENST00000455240 GOLIM4O00461 696 aa19.59■□□□□ 0.73
PTPA-225ENST00000455240 HMMRO75330 724 aa19.59■□□□□ 0.73
PTPA-225ENST00000455240 IFIT2P09913 472 aaKnown RBP19.59■□□□□ 0.73
PTPA-225ENST00000455240 CCND3P30281 292 aaPredicted RBP19.59■□□□□ 0.73
PTPA-225ENST00000455240 SEPT2Q15019 361 aa19.59■□□□□ 0.73
PTPA-225ENST00000455240 DNAJC2Q99543 621 aaKnown RBP19.59■□□□□ 0.73
PTPA-225ENST00000455240 RPAP3Q9H6T3 665 aaPredicted RBP19.59■□□□□ 0.73
PTPA-225ENST00000455240 MYH8P13535 1937 aa19.59■□□□□ 0.73
PTPA-225ENST00000455240 TCRBV5S4A2TA0A5A2 114 aa19.58■□□□□ 0.72
PTPA-225ENST00000455240 SLC15A5A6NIM6 579 aa19.58■□□□□ 0.72
PTPA-225ENST00000455240 SPDYE16A6NNV3 312 aaPredicted RBP19.58■□□□□ 0.72
PTPA-225ENST00000455240 SOX1O00570 391 aaPredicted RBP19.58■□□□□ 0.72
PTPA-225ENST00000455240 BMP8BP34820 402 aa19.58■□□□□ 0.72
PTPA-225ENST00000455240 WDR78Q5VTH9 848 aa19.58■□□□□ 0.72
PTPA-225ENST00000455240 LHX8Q68G74 356 aa19.58■□□□□ 0.72
PTPA-225ENST00000455240 RPAP2Q8IXW5 612 aaPredicted RBP19.58■□□□□ 0.72
PTPA-225ENST00000455240 EDC3Q96F86 508 aaKnown RBP19.58■□□□□ 0.72
PTPA-225ENST00000455240 BTBD7Q9P203 1132 aa19.58■□□□□ 0.72
PTPA-225ENST00000455240 MPHOSPH10O00566 681 aaKnown RBP19.57■□□□□ 0.72
PTPA-225ENST00000455240 COL6A1P12109 1028 aa19.57■□□□□ 0.72
PTPA-225ENST00000455240 PTPREP23469 700 aa19.57■□□□□ 0.72
PTPA-225ENST00000455240 EVX2Q03828 476 aa19.57■□□□□ 0.72
PTPA-225ENST00000455240 MFSD14CQ5VZR4 134 aa19.57■□□□□ 0.72
PTPA-225ENST00000455240 LCORLQ8N3X6 602 aa19.57■□□□□ 0.72
PTPA-225ENST00000455240 SDR42E1Q8WUS8 393 aa19.57■□□□□ 0.72
PTPA-225ENST00000455240 DCP1AQ9NPI6 582 aaPredicted RBP19.57■□□□□ 0.72
PTPA-225ENST00000455240 DDX19BQ9UMR2 479 aa19.57■□□□□ 0.72
PTPA-225ENST00000455240 IVNS1ABPQ9Y6Y0 642 aa19.57■□□□□ 0.72
PTPA-225ENST00000455240 A0A0G2JMZ2 1700 aa19.56■□□□□ 0.72
PTPA-225ENST00000455240 ZNF236Q9UL36 1845 aa19.56■□□□□ 0.72
PTPA-225ENST00000455240 GRB14Q14449 540 aa19.56■□□□□ 0.72
PTPA-225ENST00000455240 DIEXFQ68CQ4 756 aaKnown RBP19.56■□□□□ 0.72
PTPA-225ENST00000455240 SIRT2Q8IXJ6 389 aa19.56■□□□□ 0.72
PTPA-225ENST00000455240 ZBTB40Q9NUA8 1239 aa19.56■□□□□ 0.72
PTPA-225ENST00000455240 FLRT1Q9NZU1 646 aa19.56■□□□□ 0.72
PTPA-225ENST00000455240 RLFQ13129 1914 aa19.55■□□□□ 0.72
PTPA-225ENST00000455240 BAZ2AQ9UIF9 1905 aaKnown RBP19.55■□□□□ 0.72
PTPA-225ENST00000455240 A0A1W2PRG0 241 aa19.55■□□□□ 0.72
PTPA-225ENST00000455240 RAB11FIP3O75154 756 aa19.55■□□□□ 0.72
PTPA-225ENST00000455240 HOXC6P09630 235 aa19.55■□□□□ 0.72
PTPA-225ENST00000455240 SYN1P17600 705 aa19.55■□□□□ 0.72
PTPA-225ENST00000455240 MAGEA10P43363 369 aaPredicted RBP19.55■□□□□ 0.72
PTPA-225ENST00000455240 LRCH3Q96II8 777 aa19.55■□□□□ 0.72
PTPA-225ENST00000455240 SWAP70Q9UH65 585 aa19.55■□□□□ 0.72
PTPA-225ENST00000455240 COG6Q9Y2V7 657 aa19.55■□□□□ 0.72
PTPA-225ENST00000455240 MYH7P12883 1935 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms