RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 CEP131Q9UPN4 1083 aa4.55□□□□□ -1.68
LRCH3-209ENST00000452660 AK5Q9Y6K8 562 aa4.55□□□□□ -1.68
LRCH3-209ENST00000452660 KRTAP9-7A8MTY7 169 aa4.54□□□□□ -1.68
LRCH3-209ENST00000452660 PEX10O60683 326 aa4.54□□□□□ -1.68
LRCH3-209ENST00000452660 CBX7O95931 251 aa4.54□□□□□ -1.68
LRCH3-209ENST00000452660 LDHBP07195 334 aaKnown RBP4.54□□□□□ -1.68
LRCH3-209ENST00000452660 SNX17Q15036 470 aa4.54□□□□□ -1.68
LRCH3-209ENST00000452660 CCDC85BQ15834 202 aaPredicted RBP4.54□□□□□ -1.68
LRCH3-209ENST00000452660 TSNAXIP1Q2TAA8 658 aa4.54□□□□□ -1.68
LRCH3-209ENST00000452660 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.54□□□□□ -1.68
LRCH3-209ENST00000452660 DNAJB8Q8NHS0 232 aa4.54□□□□□ -1.68
LRCH3-209ENST00000452660 RIN3Q8TB24 985 aa4.54□□□□□ -1.68
LRCH3-209ENST00000452660 DHX38Q92620 1227 aaKnown RBP4.54□□□□□ -1.68
LRCH3-209ENST00000452660 MIR1-1HGQ9H1L0 117 aa4.54□□□□□ -1.68
LRCH3-209ENST00000452660 DUSP15Q9H1R2 295 aaPredicted RBP4.54□□□□□ -1.68
LRCH3-209ENST00000452660 CWC22Q9HCG8 908 aaKnown RBP4.54□□□□□ -1.68
LRCH3-209ENST00000452660 DCP1AQ9NPI6 582 aaPredicted RBP4.54□□□□□ -1.68
LRCH3-209ENST00000452660 GPATCH2Q9NW75 528 aa4.54□□□□□ -1.68
LRCH3-209ENST00000452660 SLAMF8Q9P0V8 285 aa4.54□□□□□ -1.68
LRCH3-209ENST00000452660 TJP2Q9UDY2 1190 aa4.54□□□□□ -1.68
LRCH3-209ENST00000452660 KCNH3Q9ULD8 1083 aa4.54□□□□□ -1.68
LRCH3-209ENST00000452660 FITM1A5D6W6 292 aa4.53□□□□□ -1.68
LRCH3-209ENST00000452660 TCAF2A6NFQ2 919 aa4.53□□□□□ -1.68
LRCH3-209ENST00000452660 SEMA7AO75326 666 aa4.53□□□□□ -1.68
LRCH3-209ENST00000452660 PGRP06401 933 aa4.53□□□□□ -1.68
LRCH3-209ENST00000452660 ST13P50502 369 aaKnown RBP4.53□□□□□ -1.68
LRCH3-209ENST00000452660 KCNA10Q16322 511 aa4.53□□□□□ -1.68
LRCH3-209ENST00000452660 TMEM201Q5SNT2 666 aa4.53□□□□□ -1.68
LRCH3-209ENST00000452660 CIAPIN1Q6FI81 312 aa4.53□□□□□ -1.68
LRCH3-209ENST00000452660 LILRA6Q6PI73 481 aa4.53□□□□□ -1.68
LRCH3-209ENST00000452660 OXR1Q8N573 874 aa4.53□□□□□ -1.68
LRCH3-209ENST00000452660 CYB5D2Q8WUJ1 264 aa4.53□□□□□ -1.68
LRCH3-209ENST00000452660 KRTAP4-11Q9BYQ6 195 aa4.53□□□□□ -1.68
LRCH3-209ENST00000452660 SLC6A17Q9H1V8 727 aa4.53□□□□□ -1.68
LRCH3-209ENST00000452660 WWC3Q9ULE0 1092 aa4.53□□□□□ -1.68
LRCH3-209ENST00000452660 DNAJC25-GNG10A0A024R161 153 aa4.52□□□□□ -1.69
LRCH3-209ENST00000452660 P4HBP07237 508 aaKnown RBP4.52□□□□□ -1.69
LRCH3-209ENST00000452660 LIG3P49916 1009 aa4.52□□□□□ -1.69
LRCH3-209ENST00000452660 CHRNEQ04844 493 aa4.52□□□□□ -1.69
LRCH3-209ENST00000452660 CDH24Q86UP0 819 aa4.52□□□□□ -1.69
LRCH3-209ENST00000452660 TSPYL5Q86VY4 417 aaPredicted RBP4.52□□□□□ -1.69
LRCH3-209ENST00000452660 RNF141Q8WVD5 230 aa4.52□□□□□ -1.69
LRCH3-209ENST00000452660 Q96M66 194 aa4.52□□□□□ -1.69
LRCH3-209ENST00000452660 SETDB2Q96T68 719 aa4.52□□□□□ -1.69
LRCH3-209ENST00000452660 SP110Q9HB58 689 aa4.52□□□□□ -1.69
LRCH3-209ENST00000452660 NCANO14594 1321 aa4.51□□□□□ -1.69
LRCH3-209ENST00000452660 PRR36Q9H6K5 1346 aa4.51□□□□□ -1.69
LRCH3-209ENST00000452660 HRKO00198 91 aa4.51□□□□□ -1.69
LRCH3-209ENST00000452660 TPP2P29144 1249 aaPredicted RBP4.51□□□□□ -1.69
LRCH3-209ENST00000452660 YARSP54577 528 aaKnown RBP4.51□□□□□ -1.69
LRCH3-209ENST00000452660 RALGPS1Q5JS13 557 aa4.51□□□□□ -1.69
LRCH3-209ENST00000452660 ATG14Q6ZNE5 492 aa4.51□□□□□ -1.69
LRCH3-209ENST00000452660 SPPL2CQ8IUH8 684 aa4.51□□□□□ -1.69
LRCH3-209ENST00000452660 SLFN12Q8IYM2 578 aa4.51□□□□□ -1.69
LRCH3-209ENST00000452660 ENOX1Q8TC92 643 aaKnown RBP4.51□□□□□ -1.69
LRCH3-209ENST00000452660 PPP1R13LQ8WUF5 828 aa4.51□□□□□ -1.69
LRCH3-209ENST00000452660 SYTL4Q96C24 671 aaPredicted RBP4.51□□□□□ -1.69
LRCH3-209ENST00000452660 DIRC2Q96SL1 478 aa4.51□□□□□ -1.69
LRCH3-209ENST00000452660 RBM47A0AV96 593 aaKnown RBP4.5□□□□□ -1.69
LRCH3-209ENST00000452660 NPIPB6E9PJ23 425 aa4.5□□□□□ -1.69
LRCH3-209ENST00000452660 PRRG2O14669 202 aa4.5□□□□□ -1.69
LRCH3-209ENST00000452660 ZGLP1P0C6A0 271 aa4.5□□□□□ -1.69
LRCH3-209ENST00000452660 CDK8P49336 464 aa4.5□□□□□ -1.69
LRCH3-209ENST00000452660 DUSP4Q13115 394 aa4.5□□□□□ -1.69
LRCH3-209ENST00000452660 SEPT6Q14141 434 aa4.5□□□□□ -1.69
LRCH3-209ENST00000452660 CREG2Q8IUH2 290 aa4.5□□□□□ -1.69
LRCH3-209ENST00000452660 ACSF2Q96CM8 615 aaPredicted RBP4.5□□□□□ -1.69
LRCH3-209ENST00000452660 ASPNQ9BXN1 380 aa4.5□□□□□ -1.69
LRCH3-209ENST00000452660 DUSP13Q9UII6 198 aa4.5□□□□□ -1.69
LRCH3-209ENST00000452660 SMG5Q9UPR3 1016 aaKnown RBP4.5□□□□□ -1.69
LRCH3-209ENST00000452660 ZNF281Q9Y2X9 895 aa4.5□□□□□ -1.69
LRCH3-209ENST00000452660 PCDHB5Q9Y5E4 795 aa4.5□□□□□ -1.69
LRCH3-209ENST00000452660 IVNS1ABPQ9Y6Y0 642 aa4.5□□□□□ -1.69
LRCH3-209ENST00000452660 ETV2O00321 342 aaPredicted RBP4.49□□□□□ -1.69
LRCH3-209ENST00000452660 TFE3P19532 575 aaPredicted RBP4.49□□□□□ -1.69
LRCH3-209ENST00000452660 ITGAEP38570 1179 aa4.49□□□□□ -1.69
LRCH3-209ENST00000452660 LINC00310P59036 64 aa4.49□□□□□ -1.69
LRCH3-209ENST00000452660 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
LRCH3-209ENST00000452660 ANKS4BQ8N8V4 417 aa4.49□□□□□ -1.69
LRCH3-209ENST00000452660 DTWD2Q8NBA8 298 aa4.49□□□□□ -1.69
LRCH3-209ENST00000452660 KCNN1Q92952 543 aa4.49□□□□□ -1.69
LRCH3-209ENST00000452660 ARID3AQ99856 593 aa4.49□□□□□ -1.69
LRCH3-209ENST00000452660 ADAMTS10Q9H324 1103 aa4.49□□□□□ -1.69
LRCH3-209ENST00000452660 ZNF552Q9H707 407 aaPredicted RBP4.49□□□□□ -1.69
LRCH3-209ENST00000452660 YBX2Q9Y2T7 364 aaKnown RBP4.49□□□□□ -1.69
LRCH3-209ENST00000452660 USP31Q70CQ4 1352 aa4.49□□□□□ -1.69
LRCH3-209ENST00000452660 TEX51A0A1B0GUA7 166 aa4.48□□□□□ -1.69
LRCH3-209ENST00000452660 CILPO75339 1184 aa4.48□□□□□ -1.69
LRCH3-209ENST00000452660 HK2P52789 917 aa4.48□□□□□ -1.69
LRCH3-209ENST00000452660 LMNB2Q03252 620 aa4.48□□□□□ -1.69
LRCH3-209ENST00000452660 EGR3Q06889 387 aa4.48□□□□□ -1.69
LRCH3-209ENST00000452660 TAF1CQ15572 869 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-209ENST00000452660 BAHD1Q8TBE0 780 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-209ENST00000452660 XAGE3Q8WTP9 111 aa4.48□□□□□ -1.69
LRCH3-209ENST00000452660 RNF32Q9H0A6 362 aa4.48□□□□□ -1.69
LRCH3-209ENST00000452660 B8ZZF3 427 aa4.47□□□□□ -1.69
LRCH3-209ENST00000452660 NUAK1O60285 661 aa4.47□□□□□ -1.69
LRCH3-209ENST00000452660 BPNT1O95861 308 aa4.47□□□□□ -1.69
LRCH3-209ENST00000452660 ERVFC1P60507 584 aa4.47□□□□□ -1.69
LRCH3-209ENST00000452660 DLG4P78352 724 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms