RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.67□□□□□ -0.38
DDR1-239ENST00000452441 TFAP4Q01664 338 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 FBXO38Q6PIJ6 1188 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 SHC4Q6S5L8 630 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 MB21D2Q8IYB1 491 aaPredicted RBP12.67□□□□□ -0.38
DDR1-239ENST00000452441 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.67□□□□□ -0.38
DDR1-239ENST00000452441 ZC3H12CQ9C0D7 883 aaKnown RBP12.67□□□□□ -0.38
DDR1-239ENST00000452441 DDX41Q9UJV9 622 aaKnown RBP12.67□□□□□ -0.38
DDR1-239ENST00000452441 KIF20AO95235 890 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 YEATS4O95619 227 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 EVCP57679 992 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 PTPROQ16827 1216 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 LETM2Q2VYF4 491 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 NYAP1Q6ZVC0 841 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 IGSF22Q8N9C0 903 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 CCDC150Q8NCX0 1101 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 DYNLL2Q96FJ2 89 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 ZNF142P52746 1687 aaPredicted RBP12.67□□□□□ -0.38
DDR1-239ENST00000452441 CMA1P23946 247 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 GYS2P54840 703 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 GTF2IP78347 998 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 MRPS25P82663 173 aaKnown RBP12.67□□□□□ -0.38
DDR1-239ENST00000452441 EVX2Q03828 476 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 SYCP1Q15431 976 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 ATL3Q6DD88 541 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 KRT222Q8N1A0 295 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 DEF6Q9H4E7 631 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 CEP131Q9UPN4 1083 aa12.67□□□□□ -0.38
DDR1-239ENST00000452441 ZMYM6O95789 1325 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 ERVV-1B6SEH8 477 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 SH2B2O14492 632 aaPredicted RBP12.66□□□□□ -0.38
DDR1-239ENST00000452441 ZSCAN12O43309 604 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 NOM1Q5C9Z4 860 aaKnown RBP12.66□□□□□ -0.38
DDR1-239ENST00000452441 KIAA1328Q86T90 577 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 ERO1AQ96HE7 468 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 TRIM47Q96LD4 638 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 DACH1Q9UI36 760 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 HPS5Q9UPZ3 1129 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 ALS2Q96Q42 1657 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 STAT6P42226 847 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 ST5P78524 1137 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 MTF1Q14872 753 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 KRBA2Q6ZNG9 492 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 NBPF11Q86T75 865 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 TMTC2Q8N394 836 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 PPP1R13BQ96KQ4 1090 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 MROH7-TTC4A0A0A0MT08 1334 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 KRT18P05783 430 aaKnown RBP12.66□□□□□ -0.38
DDR1-239ENST00000452441 USP17L8P0C7I0 530 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 KRT2P35908 639 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 ZYXQ15942 572 aaKnown RBP12.66□□□□□ -0.38
DDR1-239ENST00000452441 GLI3P10071 1580 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 ARFGEF2Q9Y6D5 1785 aa12.66□□□□□ -0.38
DDR1-239ENST00000452441 CSF1RP07333 972 aa12.65□□□□□ -0.38
DDR1-239ENST00000452441 KLRK1P26718 216 aa12.65□□□□□ -0.38
DDR1-239ENST00000452441 RNASE9P60153 205 aaKnown RBP12.65□□□□□ -0.38
DDR1-239ENST00000452441 TRIM28Q13263 835 aaKnown RBP12.65□□□□□ -0.38
DDR1-239ENST00000452441 ARMCX5Q6P1M9 558 aa12.65□□□□□ -0.38
DDR1-239ENST00000452441 TEX11Q8IYF3 940 aa12.65□□□□□ -0.38
DDR1-239ENST00000452441 SLC44A5Q8NCS7 719 aa12.65□□□□□ -0.38
DDR1-239ENST00000452441 GPCPD1Q9NPB8 672 aa12.65□□□□□ -0.38
DDR1-239ENST00000452441 KIF5CO60282 957 aa12.65□□□□□ -0.38
DDR1-239ENST00000452441 PTGDRQ13258 359 aa12.65□□□□□ -0.38
DDR1-239ENST00000452441 NKX1-1Q15270 411 aaPredicted RBP12.65□□□□□ -0.38
DDR1-239ENST00000452441 JAKMIP3Q5VZ66 844 aa12.65□□□□□ -0.38
DDR1-239ENST00000452441 E4F1Q66K89 784 aaPredicted RBP12.65□□□□□ -0.38
DDR1-239ENST00000452441 SLF1Q9BQI6 1058 aa12.65□□□□□ -0.38
DDR1-239ENST00000452441 UBA5Q9GZZ9 404 aa12.65□□□□□ -0.38
DDR1-239ENST00000452441 SEC63Q9UGP8 760 aaKnown RBP12.65□□□□□ -0.38
DDR1-239ENST00000452441 UBXN1Q04323 297 aa12.65□□□□□ -0.38
DDR1-239ENST00000452441 LRRN4CLQ8ND94 238 aa12.65□□□□□ -0.38
DDR1-239ENST00000452441 SYMPKQ92797 1274 aaKnown RBP12.65□□□□□ -0.38
DDR1-239ENST00000452441 FBXO3Q9UK99 471 aa12.65□□□□□ -0.38
DDR1-239ENST00000452441 MINPP1Q9UNW1 487 aa12.65□□□□□ -0.38
DDR1-239ENST00000452441 DEXIO95424 95 aa12.64□□□□□ -0.39
DDR1-239ENST00000452441 MTIF2P46199 727 aaKnown RBP12.64□□□□□ -0.39
DDR1-239ENST00000452441 CENPHQ9H3R5 247 aa12.64□□□□□ -0.39
DDR1-239ENST00000452441 ZCCHC17Q9NP64 241 aaKnown RBP12.64□□□□□ -0.39
DDR1-239ENST00000452441 COL18A1P39060 1754 aa12.64□□□□□ -0.39
DDR1-239ENST00000452441 SALL1Q9NSC2 1324 aa12.64□□□□□ -0.39
DDR1-239ENST00000452441 KIF2AO00139 706 aaPredicted RBP12.64□□□□□ -0.39
DDR1-239ENST00000452441 SPTY2D1Q68D10 685 aaPredicted RBP12.64□□□□□ -0.39
DDR1-239ENST00000452441 POLD4Q9HCU8 107 aa12.64□□□□□ -0.39
DDR1-239ENST00000452441 TBC1D7Q9P0N9 293 aa12.64□□□□□ -0.39
DDR1-239ENST00000452441 CPDO75976 1380 aa12.64□□□□□ -0.39
DDR1-239ENST00000452441 RFX7Q2KHR2 1363 aa12.64□□□□□ -0.39
DDR1-239ENST00000452441 ZNF804BA4D1E1 1349 aa12.64□□□□□ -0.39
DDR1-239ENST00000452441 SOWAHDA6NJG2 315 aa12.64□□□□□ -0.39
DDR1-239ENST00000452441 GSG1L2A8MUP6 293 aa12.64□□□□□ -0.39
DDR1-239ENST00000452441 TEX33O43247 280 aa12.64□□□□□ -0.39
DDR1-239ENST00000452441 CACNB3P54284 484 aa12.64□□□□□ -0.39
DDR1-239ENST00000452441 C3orf67Q6ZVT6 689 aa12.64□□□□□ -0.39
DDR1-239ENST00000452441 DYMQ7RTS9 669 aa12.64□□□□□ -0.39
DDR1-239ENST00000452441 ZNF804AQ7Z570 1209 aa12.64□□□□□ -0.39
DDR1-239ENST00000452441 CCDC47Q96A33 483 aaKnown RBP12.64□□□□□ -0.39
DDR1-239ENST00000452441 EPB41L4AQ9HCS5 686 aaPredicted RBP12.64□□□□□ -0.39
DDR1-239ENST00000452441 POLR3EQ9NVU0 708 aa12.64□□□□□ -0.39
DDR1-239ENST00000452441 CTDP1Q9Y5B0 961 aaPredicted RBP12.64□□□□□ -0.39
DDR1-239ENST00000452441 A0A1W2PQ27 194 aa12.63□□□□□ -0.39
DDR1-239ENST00000452441 A0A1W2PQ64 194 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms