RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 GJA5P36382 358 aa14.04□□□□□ -0.16
LINC00339-205ENST00000452322 ICA1Q05084 483 aa14.04□□□□□ -0.16
LINC00339-205ENST00000452322 PPP4R3BQ5MIZ7 849 aa14.04□□□□□ -0.16
LINC00339-205ENST00000452322 CYP4F22Q6NT55 531 aa14.04□□□□□ -0.16
LINC00339-205ENST00000452322 CCDC84Q86UT8 332 aaPredicted RBP14.04□□□□□ -0.16
LINC00339-205ENST00000452322 ZNF280CQ8ND82 737 aa14.04□□□□□ -0.16
LINC00339-205ENST00000452322 CAPNS2Q96L46 248 aa14.04□□□□□ -0.16
LINC00339-205ENST00000452322 BACH2Q9BYV9 841 aa14.04□□□□□ -0.16
LINC00339-205ENST00000452322 TCP11L1Q9NUJ3 509 aa14.04□□□□□ -0.16
LINC00339-205ENST00000452322 KCNH4Q9UQ05 1017 aa14.04□□□□□ -0.16
LINC00339-205ENST00000452322 AFG3L2Q9Y4W6 797 aa14.04□□□□□ -0.16
LINC00339-205ENST00000452322 SNX14Q9Y5W7 946 aa14.04□□□□□ -0.16
LINC00339-205ENST00000452322 IQCA1Q86XH1 822 aa14.03□□□□□ -0.16
LINC00339-205ENST00000452322 MB21D2Q8IYB1 491 aaPredicted RBP14.03□□□□□ -0.16
LINC00339-205ENST00000452322 NKX2-3Q8TAU0 364 aa14.03□□□□□ -0.16
LINC00339-205ENST00000452322 CEP95Q96GE4 821 aa14.03□□□□□ -0.16
LINC00339-205ENST00000452322 ZSWIM5Q9P217 1185 aa14.03□□□□□ -0.16
LINC00339-205ENST00000452322 CXCL11O14625 94 aa14.02□□□□□ -0.17
LINC00339-205ENST00000452322 NOVP48745 357 aa14.02□□□□□ -0.17
LINC00339-205ENST00000452322 ANAPC15P60006 121 aa14.02□□□□□ -0.17
LINC00339-205ENST00000452322 SPP2Q13103 211 aa14.02□□□□□ -0.17
LINC00339-205ENST00000452322 NOGQ13253 232 aa14.02□□□□□ -0.17
LINC00339-205ENST00000452322 CCDC178Q5BJE1 867 aa14.02□□□□□ -0.17
LINC00339-205ENST00000452322 CLEC10AQ8IUN9 316 aa14.02□□□□□ -0.17
LINC00339-205ENST00000452322 NEK1Q96PY6 1258 aa14.02□□□□□ -0.17
LINC00339-205ENST00000452322 SH2D4AQ9H788 454 aa14.02□□□□□ -0.17
LINC00339-205ENST00000452322 UPF2Q9HAU5 1272 aaKnown RBP14.02□□□□□ -0.17
LINC00339-205ENST00000452322 ARHGEF10LQ9HCE6 1279 aa14.02□□□□□ -0.17
LINC00339-205ENST00000452322 IL17RBQ9NRM6 502 aa14.02□□□□□ -0.17
LINC00339-205ENST00000452322 MTMR4Q9NYA4 1195 aa14.02□□□□□ -0.17
LINC00339-205ENST00000452322 NYAP2Q9P242 653 aa14.02□□□□□ -0.17
LINC00339-205ENST00000452322 CEP350Q5VT06 3117 aa14.02□□□□□ -0.17
LINC00339-205ENST00000452322 PTPRFP10586 1907 aa14.02□□□□□ -0.17
LINC00339-205ENST00000452322 THSD7BQ9C0I4 1608 aa14.01□□□□□ -0.17
LINC00339-205ENST00000452322 TRIM75PA6NK02 468 aa14.01□□□□□ -0.17
LINC00339-205ENST00000452322 USP17L10C9JJH3 530 aa14.01□□□□□ -0.17
LINC00339-205ENST00000452322 TTLL1O95922 423 aa14.01□□□□□ -0.17
LINC00339-205ENST00000452322 HMGB1P09429 215 aaKnown RBP14.01□□□□□ -0.17
LINC00339-205ENST00000452322 EEF2P13639 858 aaKnown RBP14.01□□□□□ -0.17
LINC00339-205ENST00000452322 GTF2A2P52657 109 aa14.01□□□□□ -0.17
LINC00339-205ENST00000452322 BACE1P56817 501 aa14.01□□□□□ -0.17
LINC00339-205ENST00000452322 MKRN3Q13064 507 aaKnown RBP14.01□□□□□ -0.17
LINC00339-205ENST00000452322 GRM1Q13255 1194 aa14.01□□□□□ -0.17
LINC00339-205ENST00000452322 SNAPC2Q13487 334 aa14.01□□□□□ -0.17
LINC00339-205ENST00000452322 ADCK5Q3MIX3 580 aa14.01□□□□□ -0.17
LINC00339-205ENST00000452322 CYB5R4Q7L1T6 521 aa14.01□□□□□ -0.17
LINC00339-205ENST00000452322 SIAH1Q8IUQ4 282 aa14.01□□□□□ -0.17
LINC00339-205ENST00000452322 FEZ1Q99689 392 aa14.01□□□□□ -0.17
LINC00339-205ENST00000452322 MTA3Q9BTC8 594 aa14.01□□□□□ -0.17
LINC00339-205ENST00000452322 SYNPO2Q9UMS6 1093 aa14.01□□□□□ -0.17
LINC00339-205ENST00000452322 WDR33Q9C0J8 1336 aaKnown RBP14.01□□□□□ -0.17
LINC00339-205ENST00000452322 A0A0G2JLL6 359 aaPredicted RBP14□□□□□ -0.17
LINC00339-205ENST00000452322 A0A1W2PRG0 241 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 MANSC4A6NHS7 340 aaPredicted RBP14□□□□□ -0.17
LINC00339-205ENST00000452322 C19orf81C9J6K1 198 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 NMT2O60551 498 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 PSMA5P28066 241 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 MCM5P33992 734 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 VEGFBP49765 207 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 USP14P54578 494 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 MTMR2Q13614 643 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 SH3D19Q5HYK7 790 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 PRRT2Q7Z6L0 340 aaPredicted RBP14□□□□□ -0.17
LINC00339-205ENST00000452322 DGKHQ86XP1 1220 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 ACER1Q8TDN7 264 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 MKL1Q969V6 931 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 IL17RAQ96F46 866 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 MS4A4AQ96JQ5 239 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 JAKMIP1Q96N16 626 aaKnown RBP14□□□□□ -0.17
LINC00339-205ENST00000452322 TTC14Q96N46 770 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 ZSCAN10Q96SZ4 725 aaPredicted RBP14□□□□□ -0.17
LINC00339-205ENST00000452322 ZKSCAN3Q9BRR0 538 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 UBAC1Q9BSL1 405 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 KIAA1683Q9H0B3 1180 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 STX8Q9UNK0 236 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 TMX2Q9Y320 296 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 TNKSO95271 1327 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 WDR19Q8NEZ3 1342 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 MYH4Q9Y623 1939 aa14□□□□□ -0.17
LINC00339-205ENST00000452322 LOC285556D6RIA3 1793 aa13.99□□□□□ -0.17
LINC00339-205ENST00000452322 TESPA1A2RU30 521 aaPredicted RBP13.99□□□□□ -0.17
LINC00339-205ENST00000452322 CETPP11597 493 aa13.99□□□□□ -0.17
LINC00339-205ENST00000452322 MAP2K2P36507 400 aa13.99□□□□□ -0.17
LINC00339-205ENST00000452322 ANTXR2P58335 489 aa13.99□□□□□ -0.17
LINC00339-205ENST00000452322 ATP2B2Q01814 1243 aa13.99□□□□□ -0.17
LINC00339-205ENST00000452322 SART3Q15020 963 aaKnown RBP13.99□□□□□ -0.17
LINC00339-205ENST00000452322 REM2Q8IYK8 340 aaPredicted RBP13.99□□□□□ -0.17
LINC00339-205ENST00000452322 C12orf42Q96LP6 360 aa13.99□□□□□ -0.17
LINC00339-205ENST00000452322 C22orf23Q9BZE7 217 aa13.99□□□□□ -0.17
LINC00339-205ENST00000452322 TM6SF1Q9BZW5 370 aa13.99□□□□□ -0.17
LINC00339-205ENST00000452322 CLIP2Q9UDT6 1046 aa13.99□□□□□ -0.17
LINC00339-205ENST00000452322 ERICH2A1L162 156 aa13.98□□□□□ -0.17
LINC00339-205ENST00000452322 PRC1O43663 620 aa13.98□□□□□ -0.17
LINC00339-205ENST00000452322 AOC2O75106 756 aa13.98□□□□□ -0.17
LINC00339-205ENST00000452322 RBM25P49756 843 aaKnown RBP13.98□□□□□ -0.17
LINC00339-205ENST00000452322 HMGCS2P54868 508 aa13.98□□□□□ -0.17
LINC00339-205ENST00000452322 INHBEP58166 350 aa13.98□□□□□ -0.17
LINC00339-205ENST00000452322 KIF23Q02241 960 aaPredicted RBP13.98□□□□□ -0.17
LINC00339-205ENST00000452322 SREBF2Q12772 1141 aa13.98□□□□□ -0.17
LINC00339-205ENST00000452322 COL9A3Q14050 684 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms