RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 TRIM75PA6NK02 468 aa28.43■■■□□ 2.14
CPSF4-207ENST00000451876 AOC2O75106 756 aa28.43■■■□□ 2.14
CPSF4-207ENST00000451876 ICA1Q05084 483 aa28.43■■■□□ 2.14
CPSF4-207ENST00000451876 SPP2Q13103 211 aa28.43■■■□□ 2.14
CPSF4-207ENST00000451876 SIAH1Q8IUQ4 282 aa28.43■■■□□ 2.14
CPSF4-207ENST00000451876 ZNF280CQ8ND82 737 aa28.43■■■□□ 2.14
CPSF4-207ENST00000451876 CEP95Q96GE4 821 aa28.43■■■□□ 2.14
CPSF4-207ENST00000451876 KRT23Q9C075 422 aa28.43■■■□□ 2.14
CPSF4-207ENST00000451876 IL17RBQ9NRM6 502 aa28.43■■■□□ 2.14
CPSF4-207ENST00000451876 WDR33Q9C0J8 1336 aaKnown RBP28.43■■■□□ 2.14
CPSF4-207ENST00000451876 LOC285556D6RIA3 1793 aa28.42■■■□□ 2.14
CPSF4-207ENST00000451876 ECE1P42892 770 aa28.42■■■□□ 2.14
CPSF4-207ENST00000451876 ADCK5Q3MIX3 580 aa28.42■■■□□ 2.14
CPSF4-207ENST00000451876 ACER1Q8TDN7 264 aa28.42■■■□□ 2.14
CPSF4-207ENST00000451876 WDR18Q9BV38 432 aa28.42■■■□□ 2.14
CPSF4-207ENST00000451876 ZSWIM5Q9P217 1185 aa28.42■■■□□ 2.14
CPSF4-207ENST00000451876 SNX14Q9Y5W7 946 aa28.42■■■□□ 2.14
CPSF4-207ENST00000451876 A0A1W2PRG0 241 aa28.41■■■□□ 2.14
CPSF4-207ENST00000451876 ZKSCAN1P17029 563 aaPredicted RBP28.41■■■□□ 2.14
CPSF4-207ENST00000451876 TRDNQ13061 729 aa28.41■■■□□ 2.14
CPSF4-207ENST00000451876 TSGA10IPQ3SY00 556 aa28.41■■■□□ 2.14
CPSF4-207ENST00000451876 CYB5R4Q7L1T6 521 aa28.41■■■□□ 2.14
CPSF4-207ENST00000451876 NCOA7Q8NI08 942 aa28.41■■■□□ 2.14
CPSF4-207ENST00000451876 ZKSCAN3Q9BRR0 538 aa28.41■■■□□ 2.14
CPSF4-207ENST00000451876 KANSL2Q9H9L4 492 aa28.41■■■□□ 2.14
CPSF4-207ENST00000451876 AS3MTQ9HBK9 375 aa28.41■■■□□ 2.14
CPSF4-207ENST00000451876 KCNH4Q9UQ05 1017 aa28.41■■■□□ 2.14
CPSF4-207ENST00000451876 DGKZQ13574 1117 aa28.4■■■□□ 2.14
CPSF4-207ENST00000451876 RALYLQ86SE5 291 aaKnown RBP28.4■■■□□ 2.14
CPSF4-207ENST00000451876 MS4A4AQ96JQ5 239 aa28.4■■■□□ 2.14
CPSF4-207ENST00000451876 EIF5BO60841 1220 aaKnown RBP28.4■■■□□ 2.14
CPSF4-207ENST00000451876 EEF2P13639 858 aaKnown RBP28.4■■■□□ 2.14
CPSF4-207ENST00000451876 MTMR2Q13614 643 aa28.4■■■□□ 2.14
CPSF4-207ENST00000451876 MB21D2Q8IYB1 491 aaPredicted RBP28.4■■■□□ 2.14
CPSF4-207ENST00000451876 TBC1D2Q9BYX2 928 aa28.4■■■□□ 2.14
CPSF4-207ENST00000451876 MTMR4Q9NYA4 1195 aa28.4■■■□□ 2.14
CPSF4-207ENST00000451876 NOGQ13253 232 aa28.39■■■□□ 2.13
CPSF4-207ENST00000451876 ATP2B2Q01814 1243 aa28.38■■■□□ 2.13
CPSF4-207ENST00000451876 CHST3Q7LGC8 479 aa28.38■■■□□ 2.13
CPSF4-207ENST00000451876 DNAJC5GQ8N7S2 189 aa28.38■■■□□ 2.13
CPSF4-207ENST00000451876 MCCP23508 829 aa28.37■■■□□ 2.13
CPSF4-207ENST00000451876 BACH2Q9BYV9 841 aa28.37■■■□□ 2.13
CPSF4-207ENST00000451876 USP17L10C9JJH3 530 aa28.36■■■□□ 2.13
CPSF4-207ENST00000451876 CXCL11O14625 94 aa28.36■■■□□ 2.13
CPSF4-207ENST00000451876 NT5C2P49902 561 aa28.36■■■□□ 2.13
CPSF4-207ENST00000451876 HMGCS2P54868 508 aa28.36■■■□□ 2.13
CPSF4-207ENST00000451876 BACE1P56817 501 aa28.36■■■□□ 2.13
CPSF4-207ENST00000451876 ANTXR2P58335 489 aa28.36■■■□□ 2.13
CPSF4-207ENST00000451876 KIF23Q02241 960 aaPredicted RBP28.36■■■□□ 2.13
CPSF4-207ENST00000451876 SNAPC2Q13487 334 aa28.36■■■□□ 2.13
CPSF4-207ENST00000451876 ZYXQ15942 572 aaKnown RBP28.36■■■□□ 2.13
CPSF4-207ENST00000451876 FEZ1Q99689 392 aa28.36■■■□□ 2.13
CPSF4-207ENST00000451876 TCP11L1Q9NUJ3 509 aa28.36■■■□□ 2.13
CPSF4-207ENST00000451876 STX8Q9UNK0 236 aa28.36■■■□□ 2.13
CPSF4-207ENST00000451876 A0A0G2JLL6 359 aaPredicted RBP28.36■■■□□ 2.13
CPSF4-207ENST00000451876 GTF2A2P52657 109 aa28.36■■■□□ 2.13
CPSF4-207ENST00000451876 PRRT2Q7Z6L0 340 aaPredicted RBP28.36■■■□□ 2.13
CPSF4-207ENST00000451876 NEK1Q96PY6 1258 aa28.36■■■□□ 2.13
CPSF4-207ENST00000451876 ARHGEF10LQ9HCE6 1279 aa28.36■■■□□ 2.13
CPSF4-207ENST00000451876 NYAP2Q9P242 653 aa28.36■■■□□ 2.13
CPSF4-207ENST00000451876 CLIP2Q9UDT6 1046 aa28.36■■■□□ 2.13
CPSF4-207ENST00000451876 TTLL1O95922 423 aa28.35■■■□□ 2.13
CPSF4-207ENST00000451876 NOVP48745 357 aa28.35■■■□□ 2.13
CPSF4-207ENST00000451876 MOGSQ13724 837 aa28.35■■■□□ 2.13
CPSF4-207ENST00000451876 KRT32Q14532 448 aa28.35■■■□□ 2.13
CPSF4-207ENST00000451876 RCSD1Q6JBY9 416 aa28.35■■■□□ 2.13
CPSF4-207ENST00000451876 IQCA1Q86XH1 822 aa28.35■■■□□ 2.13
CPSF4-207ENST00000451876 BRI3BPQ8WY22 251 aa28.35■■■□□ 2.13
CPSF4-207ENST00000451876 KIAA1683Q9H0B3 1180 aa28.35■■■□□ 2.13
CPSF4-207ENST00000451876 TMX2Q9Y320 296 aa28.35■■■□□ 2.13
CPSF4-207ENST00000451876 TNKSO95271 1327 aa28.34■■■□□ 2.13
CPSF4-207ENST00000451876 CCL15-CCL14A0A0B4J2E2 113 aa28.34■■■□□ 2.13
CPSF4-207ENST00000451876 CCL15Q16663 113 aa28.34■■■□□ 2.13
CPSF4-207ENST00000451876 JAKMIP1Q96N16 626 aaKnown RBP28.34■■■□□ 2.13
CPSF4-207ENST00000451876 ZSCAN10Q96SZ4 725 aaPredicted RBP28.34■■■□□ 2.13
CPSF4-207ENST00000451876 MANSC4A6NHS7 340 aaPredicted RBP28.33■■■□□ 2.13
CPSF4-207ENST00000451876 SH3D19Q5HYK7 790 aa28.33■■■□□ 2.13
CPSF4-207ENST00000451876 LRRC47Q8N1G4 583 aaKnown RBP28.33■■■□□ 2.13
CPSF4-207ENST00000451876 KIAA1755Q5JYT7 1200 aa28.32■■■□□ 2.12
CPSF4-207ENST00000451876 ENAHQ8N8S7 591 aaPredicted RBP28.32■■■□□ 2.12
CPSF4-207ENST00000451876 PTPN18Q99952 460 aa28.32■■■□□ 2.12
CPSF4-207ENST00000451876 UBAC1Q9BSL1 405 aa28.32■■■□□ 2.12
CPSF4-207ENST00000451876 EMILIN3Q9NT22 766 aa28.32■■■□□ 2.12
CPSF4-207ENST00000451876 TESPA1A2RU30 521 aaPredicted RBP28.32■■■□□ 2.12
CPSF4-207ENST00000451876 CETPP11597 493 aa28.32■■■□□ 2.12
CPSF4-207ENST00000451876 CPA1P15085 419 aa28.32■■■□□ 2.12
CPSF4-207ENST00000451876 MAP2K2P36507 400 aa28.32■■■□□ 2.12
CPSF4-207ENST00000451876 C19orf81C9J6K1 198 aa28.31■■■□□ 2.12
CPSF4-207ENST00000451876 PRC1O43663 620 aa28.31■■■□□ 2.12
CPSF4-207ENST00000451876 MCM5P33992 734 aa28.31■■■□□ 2.12
CPSF4-207ENST00000451876 SEC23AQ15436 765 aa28.31■■■□□ 2.12
CPSF4-207ENST00000451876 GADL1Q6ZQY3 521 aa28.31■■■□□ 2.12
CPSF4-207ENST00000451876 MKL1Q969V6 931 aa28.31■■■□□ 2.12
CPSF4-207ENST00000451876 TCEANC2Q96MN5 208 aa28.31■■■□□ 2.12
CPSF4-207ENST00000451876 TMEM47Q9BQJ4 181 aa28.3■■■□□ 2.12
CPSF4-207ENST00000451876 SH2D4AQ9H788 454 aa28.3■■■□□ 2.12
CPSF4-207ENST00000451876 IGF2BP3O00425 579 aaKnown RBP eCLIP28.29■■■□□ 2.12
CPSF4-207ENST00000451876 TREML2Q5T2D2 321 aa28.29■■■□□ 2.12
CPSF4-207ENST00000451876 USP17L2Q6R6M4 530 aa28.29■■■□□ 2.12
CPSF4-207ENST00000451876 DGKHQ86XP1 1220 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms