RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 SLC44A5Q8NCS7 719 aa14.33□□□□□ -0.12
SMPD4-212ENST00000451542 KANSL2Q9H9L4 492 aa14.33□□□□□ -0.12
SMPD4-212ENST00000451542 EPB41L4AQ9HCS5 686 aaPredicted RBP14.33□□□□□ -0.12
SMPD4-212ENST00000451542 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.33□□□□□ -0.12
SMPD4-212ENST00000451542 ROBO3Q96MS0 1386 aa14.33□□□□□ -0.12
SMPD4-212ENST00000451542 GCLCP48506 637 aaPredicted RBP14.32□□□□□ -0.12
SMPD4-212ENST00000451542 ICA1Q05084 483 aa14.32□□□□□ -0.12
SMPD4-212ENST00000451542 DGKZQ13574 1117 aa14.32□□□□□ -0.12
SMPD4-212ENST00000451542 MOGSQ13724 837 aa14.32□□□□□ -0.12
SMPD4-212ENST00000451542 SEPT2Q15019 361 aa14.32□□□□□ -0.12
SMPD4-212ENST00000451542 GPAT2Q6NUI2 795 aa14.32□□□□□ -0.12
SMPD4-212ENST00000451542 KIAA1683Q9H0B3 1180 aa14.32□□□□□ -0.12
SMPD4-212ENST00000451542 RAD50Q92878 1312 aa14.32□□□□□ -0.12
SMPD4-212ENST00000451542 HSPD1P10809 573 aaKnown RBP14.31□□□□□ -0.12
SMPD4-212ENST00000451542 AKR1B1P15121 316 aa14.31□□□□□ -0.12
SMPD4-212ENST00000451542 JAG1P78504 1218 aa14.31□□□□□ -0.12
SMPD4-212ENST00000451542 STK11IPQ8N1F8 1099 aa14.31□□□□□ -0.12
SMPD4-212ENST00000451542 GTF3C2Q8WUA4 911 aaPredicted RBP14.31□□□□□ -0.12
SMPD4-212ENST00000451542 C12orf42Q96LP6 360 aa14.31□□□□□ -0.12
SMPD4-212ENST00000451542 R3HDMLQ9H3Y0 253 aa14.31□□□□□ -0.12
SMPD4-212ENST00000451542 CTNNA3Q9UI47 895 aa14.31□□□□□ -0.12
SMPD4-212ENST00000451542 ZMYM6O95789 1325 aa14.31□□□□□ -0.12
SMPD4-212ENST00000451542 GNRH1P01148 92 aa14.3□□□□□ -0.12
SMPD4-212ENST00000451542 TSPY3P0CV98 308 aa14.3□□□□□ -0.12
SMPD4-212ENST00000451542 TSPY8P0CW00 308 aa14.3□□□□□ -0.12
SMPD4-212ENST00000451542 PCP11498 1178 aaKnown RBP14.3□□□□□ -0.12
SMPD4-212ENST00000451542 GSPT1P15170 499 aaKnown RBP14.3□□□□□ -0.12
SMPD4-212ENST00000451542 HOXD10P28358 340 aa14.3□□□□□ -0.12
SMPD4-212ENST00000451542 HOXA7P31268 230 aaPredicted RBP14.3□□□□□ -0.12
SMPD4-212ENST00000451542 NT5C2P49902 561 aa14.3□□□□□ -0.12
SMPD4-212ENST00000451542 ATP2B2Q01814 1243 aa14.3□□□□□ -0.12
SMPD4-212ENST00000451542 LPAR1Q92633 364 aa14.3□□□□□ -0.12
SMPD4-212ENST00000451542 RNF41Q9H4P4 317 aaPredicted RBP14.3□□□□□ -0.12
SMPD4-212ENST00000451542 EFCC1Q9HA90 598 aa14.3□□□□□ -0.12
SMPD4-212ENST00000451542 PPP4R2Q9NY27 417 aa14.3□□□□□ -0.12
SMPD4-212ENST00000451542 USP17L15C9J2P7 530 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 USP17L13C9JLJ4 530 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 USP17L11C9JVI0 530 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 USP17L18D6R9N7 530 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 USP17L22D6RA61 530 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 USP17L17D6RBQ6 530 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 USP17L19D6RCP7 530 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 USP17L20D6RJB6 530 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 FGAP02671 866 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 CYP2C8P10632 490 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 RASA1P20936 1047 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 EVX2Q03828 476 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 USP17L24Q0WX57 530 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 ZYXQ15942 572 aaKnown RBP14.29□□□□□ -0.12
SMPD4-212ENST00000451542 TREML2Q5T2D2 321 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 VPS53Q5VIR6 699 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 CASC1Q6TDU7 716 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 C17orf99Q6UX52 265 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 DSCC1Q9BVC3 393 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 GOPCQ9HD26 462 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 TOMM22Q9NS69 142 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 CPA4Q9UI42 421 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 ANAPC4Q9UJX5 808 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 TRIM17Q9Y577 477 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 LOC285556D6RIA3 1793 aa14.29□□□□□ -0.12
SMPD4-212ENST00000451542 TSPY2A6NKD2 308 aa14.28□□□□□ -0.12
SMPD4-212ENST00000451542 ZNF213O14771 459 aa14.28□□□□□ -0.12
SMPD4-212ENST00000451542 GUCY1A2P33402 732 aa14.28□□□□□ -0.12
SMPD4-212ENST00000451542 PRMT2P55345 433 aa14.28□□□□□ -0.12
SMPD4-212ENST00000451542 SHROOM1Q2M3G4 852 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-212ENST00000451542 ZNF589Q86UQ0 364 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-212ENST00000451542 CD99L2Q8TCZ2 262 aa14.28□□□□□ -0.12
SMPD4-212ENST00000451542 ACER1Q8TDN7 264 aa14.28□□□□□ -0.12
SMPD4-212ENST00000451542 MCOLN1Q9GZU1 580 aa14.28□□□□□ -0.12
SMPD4-212ENST00000451542 ASCC2Q9H1I8 757 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-212ENST00000451542 EMILIN3Q9NT22 766 aa14.28□□□□□ -0.12
SMPD4-212ENST00000451542 TMX2Q9Y320 296 aa14.28□□□□□ -0.12
SMPD4-212ENST00000451542 PRDM1O75626 825 aa14.27□□□□□ -0.13
SMPD4-212ENST00000451542 EEF2P13639 858 aaKnown RBP14.27□□□□□ -0.13
SMPD4-212ENST00000451542 CHMLP26374 656 aa14.27□□□□□ -0.13
SMPD4-212ENST00000451542 FCGRTP55899 365 aa14.27□□□□□ -0.13
SMPD4-212ENST00000451542 LACTBP83111 547 aaPredicted RBP14.27□□□□□ -0.13
SMPD4-212ENST00000451542 TFAP4Q01664 338 aa14.27□□□□□ -0.13
SMPD4-212ENST00000451542 IMMTQ16891 758 aaKnown RBP14.27□□□□□ -0.13
SMPD4-212ENST00000451542 FAM110CQ1W6H9 321 aa14.27□□□□□ -0.13
SMPD4-212ENST00000451542 BMP2KLQ5H9B9 411 aa14.27□□□□□ -0.13
SMPD4-212ENST00000451542 FBXO46Q6PJ61 603 aaPredicted RBP14.27□□□□□ -0.13
SMPD4-212ENST00000451542 MFSD6Q6ZSS7 791 aa14.27□□□□□ -0.13
SMPD4-212ENST00000451542 KIAA1211Q6ZU35 1233 aa14.27□□□□□ -0.13
SMPD4-212ENST00000451542 CCAR1Q8IX12 1150 aaKnown RBP14.27□□□□□ -0.13
SMPD4-212ENST00000451542 NEDD1Q8NHV4 660 aa14.27□□□□□ -0.13
SMPD4-212ENST00000451542 NYAP2Q9P242 653 aa14.27□□□□□ -0.13
SMPD4-212ENST00000451542 SYNPO2Q9UMS6 1093 aa14.27□□□□□ -0.13
SMPD4-212ENST00000451542 PCNTO95613 3336 aa14.26□□□□□ -0.13
SMPD4-212ENST00000451542 ORC4O43929 436 aa14.26□□□□□ -0.13
SMPD4-212ENST00000451542 RAD21O60216 631 aa14.26□□□□□ -0.13
SMPD4-212ENST00000451542 RANBP6O60518 1105 aaKnown RBP14.26□□□□□ -0.13
SMPD4-212ENST00000451542 FMNL1O95466 1100 aaPredicted RBP14.26□□□□□ -0.13
SMPD4-212ENST00000451542 TTLL1O95922 423 aa14.26□□□□□ -0.13
SMPD4-212ENST00000451542 BCRP11274 1271 aa14.26□□□□□ -0.13
SMPD4-212ENST00000451542 VCAM1P19320 739 aa14.26□□□□□ -0.13
SMPD4-212ENST00000451542 CTDSPL2Q05D32 466 aa14.26□□□□□ -0.13
SMPD4-212ENST00000451542 VCPKMTQ9H867 229 aa14.26□□□□□ -0.13
SMPD4-212ENST00000451542 HOXC10Q9NYD6 342 aa14.26□□□□□ -0.13
SMPD4-212ENST00000451542 ADGRA2Q96PE1 1338 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms