RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 ICA1Q05084 483 aa15.39■□□□□ 0.05
VPS33A-202ENST00000451053 SPP2Q13103 211 aa15.39■□□□□ 0.05
VPS33A-202ENST00000451053 COL9A3Q14050 684 aaPredicted RBP15.39■□□□□ 0.05
VPS33A-202ENST00000451053 SIAH1Q8IUQ4 282 aa15.39■□□□□ 0.05
VPS33A-202ENST00000451053 ZNF280CQ8ND82 737 aa15.39■□□□□ 0.05
VPS33A-202ENST00000451053 ACER1Q8TDN7 264 aa15.39■□□□□ 0.05
VPS33A-202ENST00000451053 ESR2Q92731 530 aa15.39■□□□□ 0.05
VPS33A-202ENST00000451053 CEP95Q96GE4 821 aa15.39■□□□□ 0.05
VPS33A-202ENST00000451053 WDR18Q9BV38 432 aa15.39■□□□□ 0.05
VPS33A-202ENST00000451053 KRT23Q9C075 422 aa15.39■□□□□ 0.05
VPS33A-202ENST00000451053 CNNM2Q9H8M5 875 aa15.39■□□□□ 0.05
VPS33A-202ENST00000451053 AS3MTQ9HBK9 375 aa15.39■□□□□ 0.05
VPS33A-202ENST00000451053 IL17RBQ9NRM6 502 aa15.39■□□□□ 0.05
VPS33A-202ENST00000451053 KCNH4Q9UQ05 1017 aa15.39■□□□□ 0.05
VPS33A-202ENST00000451053 EEF2P13639 858 aaKnown RBP15.38■□□□□ 0.05
VPS33A-202ENST00000451053 DGKZQ13574 1117 aa15.38■□□□□ 0.05
VPS33A-202ENST00000451053 ADCK5Q3MIX3 580 aa15.38■□□□□ 0.05
VPS33A-202ENST00000451053 TSGA10IPQ3SY00 556 aa15.38■□□□□ 0.05
VPS33A-202ENST00000451053 CYB5R4Q7L1T6 521 aa15.38■□□□□ 0.05
VPS33A-202ENST00000451053 RALYLQ86SE5 291 aaKnown RBP15.38■□□□□ 0.05
VPS33A-202ENST00000451053 NCOA7Q8NI08 942 aa15.38■□□□□ 0.05
VPS33A-202ENST00000451053 MS4A4AQ96JQ5 239 aa15.38■□□□□ 0.05
VPS33A-202ENST00000451053 TBC1D2Q9BYX2 928 aa15.38■□□□□ 0.05
VPS33A-202ENST00000451053 C22orf23Q9BZE7 217 aa15.38■□□□□ 0.05
VPS33A-202ENST00000451053 KANSL2Q9H9L4 492 aa15.38■□□□□ 0.05
VPS33A-202ENST00000451053 TSHZ2Q9NRE2 1034 aa15.38■□□□□ 0.05
VPS33A-202ENST00000451053 ZSWIM5Q9P217 1185 aa15.38■□□□□ 0.05
VPS33A-202ENST00000451053 SNX14Q9Y5W7 946 aa15.38■□□□□ 0.05
VPS33A-202ENST00000451053 THSD7BQ9C0I4 1608 aa15.38■□□□□ 0.05
VPS33A-202ENST00000451053 A0A1W2PRG0 241 aa15.37■□□□□ 0.05
VPS33A-202ENST00000451053 ZKSCAN1P17029 563 aaPredicted RBP15.37■□□□□ 0.05
VPS33A-202ENST00000451053 ATP2B2Q01814 1243 aa15.37■□□□□ 0.05
VPS33A-202ENST00000451053 KIF23Q02241 960 aaPredicted RBP15.37■□□□□ 0.05
VPS33A-202ENST00000451053 TRDNQ13061 729 aa15.37■□□□□ 0.05
VPS33A-202ENST00000451053 NOGQ13253 232 aa15.37■□□□□ 0.05
VPS33A-202ENST00000451053 SNAPC2Q13487 334 aa15.37■□□□□ 0.05
VPS33A-202ENST00000451053 MTMR2Q13614 643 aa15.37■□□□□ 0.05
VPS33A-202ENST00000451053 MB21D2Q8IYB1 491 aaPredicted RBP15.37■□□□□ 0.05
VPS33A-202ENST00000451053 DNAJC5GQ8N7S2 189 aa15.37■□□□□ 0.05
VPS33A-202ENST00000451053 ZKSCAN3Q9BRR0 538 aa15.37■□□□□ 0.05
VPS33A-202ENST00000451053 MTMR4Q9NYA4 1195 aa15.37■□□□□ 0.05
VPS33A-202ENST00000451053 PTPRFP10586 1907 aa15.37■□□□□ 0.05
VPS33A-202ENST00000451053 A0A0G2JLL6 359 aaPredicted RBP15.36■□□□□ 0.05
VPS33A-202ENST00000451053 USP17L10C9JJH3 530 aa15.36■□□□□ 0.05
VPS33A-202ENST00000451053 CXCL11O14625 94 aa15.36■□□□□ 0.05
VPS33A-202ENST00000451053 NT5C2P49902 561 aa15.36■□□□□ 0.05
VPS33A-202ENST00000451053 GTF2A2P52657 109 aa15.36■□□□□ 0.05
VPS33A-202ENST00000451053 HMGCS2P54868 508 aa15.36■□□□□ 0.05
VPS33A-202ENST00000451053 BACE1P56817 501 aa15.36■□□□□ 0.05
VPS33A-202ENST00000451053 ANTXR2P58335 489 aa15.36■□□□□ 0.05
VPS33A-202ENST00000451053 MOGSQ13724 837 aa15.36■□□□□ 0.05
VPS33A-202ENST00000451053 ZYXQ15942 572 aaKnown RBP15.36■□□□□ 0.05
VPS33A-202ENST00000451053 PRRT2Q7Z6L0 340 aaPredicted RBP15.36■□□□□ 0.05
VPS33A-202ENST00000451053 BRI3BPQ8WY22 251 aa15.36■□□□□ 0.05
VPS33A-202ENST00000451053 TBC1D32Q96NH3 1257 aa15.36■□□□□ 0.05
VPS33A-202ENST00000451053 FEZ1Q99689 392 aa15.36■□□□□ 0.05
VPS33A-202ENST00000451053 ARHGEF10LQ9HCE6 1279 aa15.36■□□□□ 0.05
VPS33A-202ENST00000451053 TCP11L1Q9NUJ3 509 aa15.36■□□□□ 0.05
VPS33A-202ENST00000451053 NYAP2Q9P242 653 aa15.36■□□□□ 0.05
VPS33A-202ENST00000451053 CLIP2Q9UDT6 1046 aa15.36■□□□□ 0.05
VPS33A-202ENST00000451053 CCL15-CCL14A0A0B4J2E2 113 aa15.35■□□□□ 0.05
VPS33A-202ENST00000451053 MANSC4A6NHS7 340 aaPredicted RBP15.35■□□□□ 0.05
VPS33A-202ENST00000451053 TTLL1O95922 423 aa15.35■□□□□ 0.05
VPS33A-202ENST00000451053 CETPP11597 493 aa15.35■□□□□ 0.05
VPS33A-202ENST00000451053 RBM25P49756 843 aaKnown RBP15.35■□□□□ 0.05
VPS33A-202ENST00000451053 KRT32Q14532 448 aa15.35■□□□□ 0.05
VPS33A-202ENST00000451053 CCL15Q16663 113 aa15.35■□□□□ 0.05
VPS33A-202ENST00000451053 CHST3Q7LGC8 479 aa15.35■□□□□ 0.05
VPS33A-202ENST00000451053 NEK1Q96PY6 1258 aa15.35■□□□□ 0.05
VPS33A-202ENST00000451053 ZSCAN10Q96SZ4 725 aaPredicted RBP15.35■□□□□ 0.05
VPS33A-202ENST00000451053 KIAA1683Q9H0B3 1180 aa15.35■□□□□ 0.05
VPS33A-202ENST00000451053 LOC285556D6RIA3 1793 aa15.34■□□□□ 0.05
VPS33A-202ENST00000451053 TESPA1A2RU30 521 aaPredicted RBP15.34■□□□□ 0.05
VPS33A-202ENST00000451053 NOVP48745 357 aa15.34■□□□□ 0.05
VPS33A-202ENST00000451053 SH3D19Q5HYK7 790 aa15.34■□□□□ 0.05
VPS33A-202ENST00000451053 KIAA1755Q5JYT7 1200 aa15.34■□□□□ 0.05
VPS33A-202ENST00000451053 RCSD1Q6JBY9 416 aa15.34■□□□□ 0.05
VPS33A-202ENST00000451053 GADL1Q6ZQY3 521 aa15.34■□□□□ 0.05
VPS33A-202ENST00000451053 IQCA1Q86XH1 822 aa15.34■□□□□ 0.05
VPS33A-202ENST00000451053 LRRC47Q8N1G4 583 aaKnown RBP15.34■□□□□ 0.05
VPS33A-202ENST00000451053 JAKMIP1Q96N16 626 aaKnown RBP15.34■□□□□ 0.05
VPS33A-202ENST00000451053 EMILIN3Q9NT22 766 aa15.34■□□□□ 0.05
VPS33A-202ENST00000451053 STX8Q9UNK0 236 aa15.34■□□□□ 0.05
VPS33A-202ENST00000451053 TMX2Q9Y320 296 aa15.34■□□□□ 0.05
VPS33A-202ENST00000451053 TNKSO95271 1327 aa15.34■□□□□ 0.05
VPS33A-202ENST00000451053 MYH4Q9Y623 1939 aa15.33■□□□□ 0.05
VPS33A-202ENST00000451053 C19orf81C9J6K1 198 aa15.33■□□□□ 0.04
VPS33A-202ENST00000451053 PRC1O43663 620 aa15.33■□□□□ 0.04
VPS33A-202ENST00000451053 CPA1P15085 419 aa15.33■□□□□ 0.04
VPS33A-202ENST00000451053 MAP2K2P36507 400 aa15.33■□□□□ 0.04
VPS33A-202ENST00000451053 SEC23AQ15436 765 aa15.33■□□□□ 0.04
VPS33A-202ENST00000451053 USP17L2Q6R6M4 530 aa15.33■□□□□ 0.04
VPS33A-202ENST00000451053 ENAHQ8N8S7 591 aaPredicted RBP15.33■□□□□ 0.04
VPS33A-202ENST00000451053 MKL1Q969V6 931 aa15.33■□□□□ 0.04
VPS33A-202ENST00000451053 PTPN18Q99952 460 aa15.33■□□□□ 0.04
VPS33A-202ENST00000451053 UBAC1Q9BSL1 405 aa15.33■□□□□ 0.04
VPS33A-202ENST00000451053 SH2D4AQ9H788 454 aa15.33■□□□□ 0.04
VPS33A-202ENST00000451053 BTBD19C9JJ37 291 aa15.32■□□□□ 0.04
VPS33A-202ENST00000451053 IGF2BP3O00425 579 aaKnown RBP eCLIP15.32■□□□□ 0.04
VPS33A-202ENST00000451053 MCM5P33992 734 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms