RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 PLEKHM2Q8IWE5 1019 aa20.45■□□□□ 0.86
PRPF40A-204ENST00000450303 ACER1Q8TDN7 264 aa20.45■□□□□ 0.86
PRPF40A-204ENST00000450303 FEZ1Q99689 392 aa20.45■□□□□ 0.86
PRPF40A-204ENST00000450303 STAP2Q9UGK3 403 aa20.45■□□□□ 0.86
PRPF40A-204ENST00000450303 SLC4A4Q9Y6R1 1079 aa20.45■□□□□ 0.86
PRPF40A-204ENST00000450303 MPHOSPH10O00566 681 aaKnown RBP20.44■□□□□ 0.86
PRPF40A-204ENST00000450303 GRK4P32298 578 aa20.44■□□□□ 0.86
PRPF40A-204ENST00000450303 GUCY1A2P33402 732 aa20.44■□□□□ 0.86
PRPF40A-204ENST00000450303 GCLCP48506 637 aaPredicted RBP20.44■□□□□ 0.86
PRPF40A-204ENST00000450303 PDE1AP54750 535 aa20.44■□□□□ 0.86
PRPF40A-204ENST00000450303 SEPT2Q15019 361 aa20.44■□□□□ 0.86
PRPF40A-204ENST00000450303 MTFR1Q15390 333 aa20.44■□□□□ 0.86
PRPF40A-204ENST00000450303 FAM110CQ1W6H9 321 aa20.44■□□□□ 0.86
PRPF40A-204ENST00000450303 OSBPL3Q9H4L5 887 aa20.44■□□□□ 0.86
PRPF40A-204ENST00000450303 ATP8A2Q9NTI2 1148 aa20.44■□□□□ 0.86
PRPF40A-204ENST00000450303 BIN2Q9UBW5 565 aaPredicted RBP20.44■□□□□ 0.86
PRPF40A-204ENST00000450303 MYH8P13535 1937 aa20.43■□□□□ 0.86
PRPF40A-204ENST00000450303 CENPFP49454 3210 aa20.43■□□□□ 0.86
PRPF40A-204ENST00000450303 GLRX3O76003 335 aaKnown RBP20.43■□□□□ 0.86
PRPF40A-204ENST00000450303 HOXA7P31268 230 aaPredicted RBP20.43■□□□□ 0.86
PRPF40A-204ENST00000450303 FLT3LGP49771 235 aa20.43■□□□□ 0.86
PRPF40A-204ENST00000450303 KBTBD3Q8NAB2 608 aa20.43■□□□□ 0.86
PRPF40A-204ENST00000450303 TAOK2Q9UL54 1235 aa20.43■□□□□ 0.86
PRPF40A-204ENST00000450303 SALL3Q9BXA9 1300 aa20.43■□□□□ 0.86
PRPF40A-204ENST00000450303 PDE4DIPQ5VU43 2346 aa20.42■□□□□ 0.86
PRPF40A-204ENST00000450303 USP17L12C9JPN9 530 aa20.42■□□□□ 0.86
PRPF40A-204ENST00000450303 USP17L21D6R901 530 aa20.42■□□□□ 0.86
PRPF40A-204ENST00000450303 ADCY3O60266 1144 aa20.41■□□□□ 0.86
PRPF40A-204ENST00000450303 ELNP15502 786 aa20.41■□□□□ 0.86
PRPF40A-204ENST00000450303 HERVK_113P62684 666 aa20.41■□□□□ 0.86
PRPF40A-204ENST00000450303 C12orf60Q5U649 245 aa20.41■□□□□ 0.86
PRPF40A-204ENST00000450303 OSBP2Q969R2 916 aa20.41■□□□□ 0.86
PRPF40A-204ENST00000450303 COA7Q96BR5 231 aa20.41■□□□□ 0.86
PRPF40A-204ENST00000450303 STRBPQ96SI9 672 aaKnown RBP20.41■□□□□ 0.86
PRPF40A-204ENST00000450303 TXNRD2Q9NNW7 524 aa20.41■□□□□ 0.86
PRPF40A-204ENST00000450303 RNF113AO15541 343 aaKnown RBP20.4■□□□□ 0.86
PRPF40A-204ENST00000450303 AKR1B1P15121 316 aa20.4■□□□□ 0.86
PRPF40A-204ENST00000450303 CTR9Q6PD62 1173 aa20.4■□□□□ 0.86
PRPF40A-204ENST00000450303 PI4K2BQ8TCG2 481 aa20.4■□□□□ 0.86
PRPF40A-204ENST00000450303 DDRGK1Q96HY6 314 aa20.4■□□□□ 0.86
PRPF40A-204ENST00000450303 A0A1W2PRG0 241 aa20.39■□□□□ 0.85
PRPF40A-204ENST00000450303 CDK8P49336 464 aa20.39■□□□□ 0.85
PRPF40A-204ENST00000450303 Q3C1V9 767 aa20.39■□□□□ 0.85
PRPF40A-204ENST00000450303 CLEC10AQ8IUN9 316 aa20.39■□□□□ 0.85
PRPF40A-204ENST00000450303 AMOTL1Q8IY63 956 aa20.39■□□□□ 0.85
PRPF40A-204ENST00000450303 STK11IPQ8N1F8 1099 aa20.39■□□□□ 0.85
PRPF40A-204ENST00000450303 SLAIN1Q8ND83 568 aa20.39■□□□□ 0.85
PRPF40A-204ENST00000450303 APPBP2Q92624 585 aa20.39■□□□□ 0.85
PRPF40A-204ENST00000450303 C12orf42Q96LP6 360 aa20.39■□□□□ 0.85
PRPF40A-204ENST00000450303 PAGR1Q9BTK6 254 aa20.39■□□□□ 0.85
PRPF40A-204ENST00000450303 KIAA1683Q9H0B3 1180 aa20.39■□□□□ 0.85
PRPF40A-204ENST00000450303 RBPJLQ9UBG7 517 aa20.39■□□□□ 0.85
PRPF40A-204ENST00000450303 MORF4L1Q9UBU8 362 aa20.39■□□□□ 0.85
PRPF40A-204ENST00000450303 SWAP70Q9UH65 585 aa20.39■□□□□ 0.85
PRPF40A-204ENST00000450303 USP17L15C9J2P7 530 aa20.38■□□□□ 0.85
PRPF40A-204ENST00000450303 USP17L13C9JLJ4 530 aa20.38■□□□□ 0.85
PRPF40A-204ENST00000450303 USP17L11C9JVI0 530 aa20.38■□□□□ 0.85
PRPF40A-204ENST00000450303 USP17L18D6R9N7 530 aa20.38■□□□□ 0.85
PRPF40A-204ENST00000450303 USP17L22D6RA61 530 aa20.38■□□□□ 0.85
PRPF40A-204ENST00000450303 USP17L17D6RBQ6 530 aa20.38■□□□□ 0.85
PRPF40A-204ENST00000450303 USP17L19D6RCP7 530 aa20.38■□□□□ 0.85
PRPF40A-204ENST00000450303 USP17L20D6RJB6 530 aa20.38■□□□□ 0.85
PRPF40A-204ENST00000450303 CCL5P13501 91 aa20.38■□□□□ 0.85
PRPF40A-204ENST00000450303 USP14P54578 494 aa20.38■□□□□ 0.85
PRPF40A-204ENST00000450303 USP17L24Q0WX57 530 aa20.38■□□□□ 0.85
PRPF40A-204ENST00000450303 POTEEQ6S8J3 1075 aa20.38■□□□□ 0.85
PRPF40A-204ENST00000450303 GPRC5AQ8NFJ5 357 aa20.38■□□□□ 0.85
PRPF40A-204ENST00000450303 GSG1L2A8MUP6 293 aa20.37■□□□□ 0.85
PRPF40A-204ENST00000450303 M0R2C6 588 aa20.37■□□□□ 0.85
PRPF40A-204ENST00000450303 VCAM1P19320 739 aa20.37■□□□□ 0.85
PRPF40A-204ENST00000450303 UBXN2AP68543 259 aa20.37■□□□□ 0.85
PRPF40A-204ENST00000450303 IRF5Q13568 498 aa20.37■□□□□ 0.85
PRPF40A-204ENST00000450303 TTC22Q5TAA0 569 aa20.37■□□□□ 0.85
PRPF40A-204ENST00000450303 CATSPERGQ6ZRH7 1159 aa20.37■□□□□ 0.85
PRPF40A-204ENST00000450303 TMEM179Q6ZVK1 233 aa20.37■□□□□ 0.85
PRPF40A-204ENST00000450303 SKAP1Q86WV1 359 aa20.37■□□□□ 0.85
PRPF40A-204ENST00000450303 RNF208Q9H0X6 261 aa20.37■□□□□ 0.85
PRPF40A-204ENST00000450303 ZFYP08048 801 aaPredicted RBP20.36■□□□□ 0.85
PRPF40A-204ENST00000450303 C16orf86Q6ZW13 317 aa20.36■□□□□ 0.85
PRPF40A-204ENST00000450303 SEC62Q99442 399 aaKnown RBP20.36■□□□□ 0.85
PRPF40A-204ENST00000450303 FSD1Q9BTV5 496 aa20.36■□□□□ 0.85
PRPF40A-204ENST00000450303 UNC93B1Q9H1C4 597 aa20.36■□□□□ 0.85
PRPF40A-204ENST00000450303 RPAP3Q9H6T3 665 aaPredicted RBP20.36■□□□□ 0.85
PRPF40A-204ENST00000450303 PLXNB2O15031 1838 aa20.36■□□□□ 0.85
PRPF40A-204ENST00000450303 MINDY4BA8MYZ0 360 aa20.35■□□□□ 0.85
PRPF40A-204ENST00000450303 TRIM6-TRIM34B2RNG4 842 aa20.35■□□□□ 0.85
PRPF40A-204ENST00000450303 GPAA1O43292 621 aa20.35■□□□□ 0.85
PRPF40A-204ENST00000450303 INHAP05111 366 aa20.35■□□□□ 0.85
PRPF40A-204ENST00000450303 ERVK-9P63128 1117 aa20.35■□□□□ 0.85
PRPF40A-204ENST00000450303 ERVK-24P63145 666 aa20.35■□□□□ 0.85
PRPF40A-204ENST00000450303 SIAH1Q8IUQ4 282 aa20.35■□□□□ 0.85
PRPF40A-204ENST00000450303 PXYLP1Q8TE99 480 aa20.35■□□□□ 0.85
PRPF40A-204ENST00000450303 GJD2Q9UKL4 321 aa20.35■□□□□ 0.85
PRPF40A-204ENST00000450303 APPP05067 770 aa20.34■□□□□ 0.85
PRPF40A-204ENST00000450303 KIAA1755Q5JYT7 1200 aa20.34■□□□□ 0.85
PRPF40A-204ENST00000450303 PORCNQ9H237 461 aa20.34■□□□□ 0.85
PRPF40A-204ENST00000450303 ARPP21Q9UBL0 812 aaPredicted RBP20.34■□□□□ 0.85
PRPF40A-204ENST00000450303 CNMDO75829 334 aa20.33■□□□□ 0.85
PRPF40A-204ENST00000450303 CYP2B6P20813 491 aa20.33■□□□□ 0.85
PRPF40A-204ENST00000450303 ATP2B2Q01814 1243 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms