RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 CCL5P13501 91 aa14.91□□□□□ -0.02
MSH5-209ENST00000450148 Q3C1V9 767 aa14.91□□□□□ -0.02
MSH5-209ENST00000450148 C12orf60Q5U649 245 aa14.91□□□□□ -0.02
MSH5-209ENST00000450148 KBTBD3Q8NAB2 608 aa14.91□□□□□ -0.02
MSH5-209ENST00000450148 COA7Q96BR5 231 aa14.91□□□□□ -0.02
MSH5-209ENST00000450148 CABP5Q9NP86 173 aa14.91□□□□□ -0.02
MSH5-209ENST00000450148 MKI67P46013 3256 aaKnown RBP14.91□□□□□ -0.02
MSH5-209ENST00000450148 USP17L12C9JPN9 530 aa14.9□□□□□ -0.02
MSH5-209ENST00000450148 USP17L21D6R901 530 aa14.9□□□□□ -0.02
MSH5-209ENST00000450148 CNMDO75829 334 aa14.9□□□□□ -0.02
MSH5-209ENST00000450148 GJB1P08034 283 aa14.9□□□□□ -0.02
MSH5-209ENST00000450148 GJA8P48165 433 aa14.9□□□□□ -0.02
MSH5-209ENST00000450148 UBXN2AP68543 259 aa14.9□□□□□ -0.02
MSH5-209ENST00000450148 ZYXQ15942 572 aaKnown RBP14.9□□□□□ -0.02
MSH5-209ENST00000450148 CATSPERGQ6ZRH7 1159 aa14.9□□□□□ -0.02
MSH5-209ENST00000450148 UBE2Q1Q7Z7E8 422 aa14.9□□□□□ -0.02
MSH5-209ENST00000450148 SIAH1Q8IUQ4 282 aa14.9□□□□□ -0.02
MSH5-209ENST00000450148 OTUD7AQ8TE49 926 aaPredicted RBP14.9□□□□□ -0.02
MSH5-209ENST00000450148 CRBNQ96SW2 442 aa14.9□□□□□ -0.02
MSH5-209ENST00000450148 UNC93B1Q9H1C4 597 aa14.9□□□□□ -0.02
MSH5-209ENST00000450148 SWAP70Q9UH65 585 aa14.9□□□□□ -0.02
MSH5-209ENST00000450148 TAOK2Q9UL54 1235 aa14.9□□□□□ -0.02
MSH5-209ENST00000450148 SALL3Q9BXA9 1300 aa14.9□□□□□ -0.02
MSH5-209ENST00000450148 A0A0G2JMZ2 1700 aa14.89□□□□□ -0.03
MSH5-209ENST00000450148 INHAP05111 366 aa14.89□□□□□ -0.03
MSH5-209ENST00000450148 VCAM1P19320 739 aa14.89□□□□□ -0.03
MSH5-209ENST00000450148 USP14P54578 494 aa14.89□□□□□ -0.03
MSH5-209ENST00000450148 ERVK-9P63128 1117 aa14.89□□□□□ -0.03
MSH5-209ENST00000450148 ERVK-24P63145 666 aa14.89□□□□□ -0.03
MSH5-209ENST00000450148 ZSCAN25Q6NSZ9 544 aa14.89□□□□□ -0.03
MSH5-209ENST00000450148 PI4K2BQ8TCG2 481 aa14.89□□□□□ -0.03
MSH5-209ENST00000450148 OSBP2Q969R2 916 aa14.89□□□□□ -0.03
MSH5-209ENST00000450148 STRBPQ96SI9 672 aaKnown RBP14.89□□□□□ -0.03
MSH5-209ENST00000450148 FEZ1Q99689 392 aa14.89□□□□□ -0.03
MSH5-209ENST00000450148 RNF208Q9H0X6 261 aa14.89□□□□□ -0.03
MSH5-209ENST00000450148 SLC4A4Q9Y6R1 1079 aa14.89□□□□□ -0.03
MSH5-209ENST00000450148 TTC41PQ6P2S7 1318 aa14.89□□□□□ -0.03
MSH5-209ENST00000450148 USP17L15C9J2P7 530 aa14.88□□□□□ -0.03
MSH5-209ENST00000450148 USP17L13C9JLJ4 530 aa14.88□□□□□ -0.03
MSH5-209ENST00000450148 USP17L11C9JVI0 530 aa14.88□□□□□ -0.03
MSH5-209ENST00000450148 USP17L18D6R9N7 530 aa14.88□□□□□ -0.03
MSH5-209ENST00000450148 USP17L22D6RA61 530 aa14.88□□□□□ -0.03
MSH5-209ENST00000450148 USP17L17D6RBQ6 530 aa14.88□□□□□ -0.03
MSH5-209ENST00000450148 USP17L19D6RCP7 530 aa14.88□□□□□ -0.03
MSH5-209ENST00000450148 USP17L20D6RJB6 530 aa14.88□□□□□ -0.03
MSH5-209ENST00000450148 AKR1B1P15121 316 aa14.88□□□□□ -0.03
MSH5-209ENST00000450148 CDK8P49336 464 aa14.88□□□□□ -0.03
MSH5-209ENST00000450148 USP17L24Q0WX57 530 aa14.88□□□□□ -0.03
MSH5-209ENST00000450148 KIAA1755Q5JYT7 1200 aa14.88□□□□□ -0.03
MSH5-209ENST00000450148 CTR9Q6PD62 1173 aa14.88□□□□□ -0.03
MSH5-209ENST00000450148 LBX2Q6XYB7 198 aa14.88□□□□□ -0.03
MSH5-209ENST00000450148 C16orf86Q6ZW13 317 aa14.88□□□□□ -0.03
MSH5-209ENST00000450148 GPRC5AQ8NFJ5 357 aa14.88□□□□□ -0.03
MSH5-209ENST00000450148 GTF3C2Q8WUA4 911 aaPredicted RBP14.88□□□□□ -0.03
MSH5-209ENST00000450148 APPBP2Q92624 585 aa14.88□□□□□ -0.03
MSH5-209ENST00000450148 PORCNQ9H237 461 aa14.88□□□□□ -0.03
MSH5-209ENST00000450148 BIN2Q9UBW5 565 aaPredicted RBP14.88□□□□□ -0.03
MSH5-209ENST00000450148 GSG1L2A8MUP6 293 aa14.87□□□□□ -0.03
MSH5-209ENST00000450148 RNF113AO15541 343 aaKnown RBP14.87□□□□□ -0.03
MSH5-209ENST00000450148 TMEM179Q6ZVK1 233 aa14.87□□□□□ -0.03
MSH5-209ENST00000450148 CLEC10AQ8IUN9 316 aa14.87□□□□□ -0.03
MSH5-209ENST00000450148 NKX2-3Q8TAU0 364 aa14.87□□□□□ -0.03
MSH5-209ENST00000450148 U2AF1L4Q8WU68 220 aaKnown RBP14.87□□□□□ -0.03
MSH5-209ENST00000450148 USP6NLQ92738 828 aa14.87□□□□□ -0.03
MSH5-209ENST00000450148 GPATCH3Q96I76 525 aa14.87□□□□□ -0.03
MSH5-209ENST00000450148 RPAP3Q9H6T3 665 aaPredicted RBP14.87□□□□□ -0.03
MSH5-209ENST00000450148 PAK6Q9NQU5 681 aaPredicted RBP14.87□□□□□ -0.03
MSH5-209ENST00000450148 RABGAP1Q9Y3P9 1069 aa14.87□□□□□ -0.03
MSH5-209ENST00000450148 ALPK3Q96L96 1907 aa14.86□□□□□ -0.03
MSH5-209ENST00000450148 SPDYE16A6NNV3 312 aaPredicted RBP14.86□□□□□ -0.03
MSH5-209ENST00000450148 MPHOSPH10O00566 681 aaKnown RBP14.86□□□□□ -0.03
MSH5-209ENST00000450148 SGPL1O95470 568 aa14.86□□□□□ -0.03
MSH5-209ENST00000450148 TRIM32Q13049 653 aa14.86□□□□□ -0.03
MSH5-209ENST00000450148 SBK1Q52WX2 424 aa14.86□□□□□ -0.03
MSH5-209ENST00000450148 TRIB2Q92519 343 aa14.86□□□□□ -0.03
MSH5-209ENST00000450148 CCDC17Q96LX7 622 aa14.86□□□□□ -0.03
MSH5-209ENST00000450148 YTHDC1Q96MU7 727 aaKnown RBP14.86□□□□□ -0.03
MSH5-209ENST00000450148 PAGR1Q9BTK6 254 aa14.86□□□□□ -0.03
MSH5-209ENST00000450148 EPB41L4AQ9HCS5 686 aaPredicted RBP14.86□□□□□ -0.03
MSH5-209ENST00000450148 BTBD7Q9P203 1132 aa14.86□□□□□ -0.03
MSH5-209ENST00000450148 COL11A1P12107 1806 aaPredicted RBP14.86□□□□□ -0.03
MSH5-209ENST00000450148 M0R2C6 588 aa14.85□□□□□ -0.03
MSH5-209ENST00000450148 HMGCRP04035 888 aa14.85□□□□□ -0.03
MSH5-209ENST00000450148 ZFYP08048 801 aaPredicted RBP14.85□□□□□ -0.03
MSH5-209ENST00000450148 MAPK4P31152 587 aa14.85□□□□□ -0.03
MSH5-209ENST00000450148 MORN1Q5T089 497 aa14.85□□□□□ -0.03
MSH5-209ENST00000450148 GIMAP6Q6P9H5 292 aa14.85□□□□□ -0.03
MSH5-209ENST00000450148 GPR142Q7Z601 462 aa14.85□□□□□ -0.03
MSH5-209ENST00000450148 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.85□□□□□ -0.03
MSH5-209ENST00000450148 ARPP21Q9UBL0 812 aaPredicted RBP14.85□□□□□ -0.03
MSH5-209ENST00000450148 TMX2Q9Y320 296 aa14.85□□□□□ -0.03
MSH5-209ENST00000450148 ROBO3Q96MS0 1386 aa14.85□□□□□ -0.03
MSH5-209ENST00000450148 ZNFX1Q9P2E3 1918 aaKnown RBP14.84□□□□□ -0.03
MSH5-209ENST00000450148 MYH4Q9Y623 1939 aa14.84□□□□□ -0.03
MSH5-209ENST00000450148 GPAA1O43292 621 aa14.84□□□□□ -0.03
MSH5-209ENST00000450148 GLRX3O76003 335 aaKnown RBP14.84□□□□□ -0.03
MSH5-209ENST00000450148 SLC34A2O95436 690 aa14.84□□□□□ -0.03
MSH5-209ENST00000450148 XRCC5P13010 732 aaKnown RBP14.84□□□□□ -0.03
MSH5-209ENST00000450148 CYP2B6P20813 491 aa14.84□□□□□ -0.03
MSH5-209ENST00000450148 HDAC1Q13547 482 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms