RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 ZNF444Q8N0Y2 327 aaPredicted RBP18.7■□□□□ 0.58
TOP3B-211ENST00000449704 ZNF296Q8WUU4 475 aaPredicted RBP18.7■□□□□ 0.58
TOP3B-211ENST00000449704 RUFY2Q8WXA3 655 aa18.7■□□□□ 0.58
TOP3B-211ENST00000449704 AGTPBP1Q9UPW5 1226 aa18.7■□□□□ 0.58
TOP3B-211ENST00000449704 ROBO3Q96MS0 1386 aa18.69■□□□□ 0.58
TOP3B-211ENST00000449704 BAZ2AQ9UIF9 1905 aaKnown RBP18.69■□□□□ 0.58
TOP3B-211ENST00000449704 FKTNO75072 461 aa18.69■□□□□ 0.58
TOP3B-211ENST00000449704 SLC34A2O95436 690 aa18.69■□□□□ 0.58
TOP3B-211ENST00000449704 CYP2C8P10632 490 aa18.69■□□□□ 0.58
TOP3B-211ENST00000449704 RASA1P20936 1047 aa18.69■□□□□ 0.58
TOP3B-211ENST00000449704 USP17L2Q6R6M4 530 aa18.69■□□□□ 0.58
TOP3B-211ENST00000449704 PARK7Q99497 189 aaKnown RBP18.69■□□□□ 0.58
TOP3B-211ENST00000449704 TLR2O60603 784 aa18.68■□□□□ 0.58
TOP3B-211ENST00000449704 HAND2P61296 217 aa18.68■□□□□ 0.58
TOP3B-211ENST00000449704 ATP2B2Q01814 1243 aa18.68■□□□□ 0.58
TOP3B-211ENST00000449704 ICA1Q05084 483 aa18.68■□□□□ 0.58
TOP3B-211ENST00000449704 CLEC10AQ8IUN9 316 aa18.68■□□□□ 0.58
TOP3B-211ENST00000449704 IL25Q9H293 177 aa18.68■□□□□ 0.58
TOP3B-211ENST00000449704 EMILIN3Q9NT22 766 aa18.68■□□□□ 0.58
TOP3B-211ENST00000449704 USP14P54578 494 aa18.67■□□□□ 0.58
TOP3B-211ENST00000449704 PABPC4Q13310 644 aaKnown RBP eCLIP18.67■□□□□ 0.58
TOP3B-211ENST00000449704 NOM1Q5C9Z4 860 aaKnown RBP18.67■□□□□ 0.58
TOP3B-211ENST00000449704 BMP2KLQ5H9B9 411 aa18.67■□□□□ 0.58
TOP3B-211ENST00000449704 KIAA1683Q9H0B3 1180 aa18.67■□□□□ 0.58
TOP3B-211ENST00000449704 KANSL2Q9H9L4 492 aa18.67■□□□□ 0.58
TOP3B-211ENST00000449704 ARHGEF10LQ9HCE6 1279 aa18.67■□□□□ 0.58
TOP3B-211ENST00000449704 INCENPQ9NQS7 918 aa18.67■□□□□ 0.58
TOP3B-211ENST00000449704 CPA4Q9UI42 421 aa18.67■□□□□ 0.58
TOP3B-211ENST00000449704 ANAPC4Q9UJX5 808 aa18.67■□□□□ 0.58
TOP3B-211ENST00000449704 SLC45A1Q9Y2W3 748 aa18.67■□□□□ 0.58
TOP3B-211ENST00000449704 A0A1W2PRG0 241 aa18.66■□□□□ 0.58
TOP3B-211ENST00000449704 SP3Q02447 781 aa18.66■□□□□ 0.58
TOP3B-211ENST00000449704 FAM47AQ5JRC9 791 aa18.66■□□□□ 0.58
TOP3B-211ENST00000449704 DSCC1Q9BVC3 393 aa18.66■□□□□ 0.58
TOP3B-211ENST00000449704 TOMM22Q9NS69 142 aa18.66■□□□□ 0.58
TOP3B-211ENST00000449704 PNMA3Q9UL41 463 aa18.66■□□□□ 0.58
TOP3B-211ENST00000449704 RAD50Q92878 1312 aa18.66■□□□□ 0.58
TOP3B-211ENST00000449704 EEF2P13639 858 aaKnown RBP18.65■□□□□ 0.58
TOP3B-211ENST00000449704 OSBPP22059 807 aa18.65■□□□□ 0.58
TOP3B-211ENST00000449704 TFAP4Q01664 338 aa18.65■□□□□ 0.58
TOP3B-211ENST00000449704 SIAH1Q8IUQ4 282 aa18.65■□□□□ 0.58
TOP3B-211ENST00000449704 SMCR8Q8TEV9 937 aaPredicted RBP18.65■□□□□ 0.58
TOP3B-211ENST00000449704 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.65■□□□□ 0.58
TOP3B-211ENST00000449704 ZMYM6O95789 1325 aa18.65■□□□□ 0.58
TOP3B-211ENST00000449704 ZNF213O14771 459 aa18.64■□□□□ 0.57
TOP3B-211ENST00000449704 TSPY3P0CV98 308 aa18.64■□□□□ 0.57
TOP3B-211ENST00000449704 TSPY8P0CW00 308 aa18.64■□□□□ 0.57
TOP3B-211ENST00000449704 IRX3P78415 501 aaPredicted RBP18.64■□□□□ 0.57
TOP3B-211ENST00000449704 RRP12Q5JTH9 1297 aaKnown RBP18.64■□□□□ 0.57
TOP3B-211ENST00000449704 C17orf99Q6UX52 265 aa18.64■□□□□ 0.57
TOP3B-211ENST00000449704 C12orf42Q96LP6 360 aa18.64■□□□□ 0.57
TOP3B-211ENST00000449704 ASCC2Q9H1I8 757 aaPredicted RBP18.64■□□□□ 0.57
TOP3B-211ENST00000449704 SH2D4AQ9H788 454 aa18.64■□□□□ 0.57
TOP3B-211ENST00000449704 CTNNA3Q9UI47 895 aa18.64■□□□□ 0.57
TOP3B-211ENST00000449704 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.64■□□□□ 0.57
TOP3B-211ENST00000449704 TACC3Q9Y6A5 838 aa18.64■□□□□ 0.57
TOP3B-211ENST00000449704 TSPY2A6NKD2 308 aa18.63■□□□□ 0.57
TOP3B-211ENST00000449704 SGSM2O43147 1006 aa18.63■□□□□ 0.57
TOP3B-211ENST00000449704 RANBP6O60518 1105 aaKnown RBP18.63■□□□□ 0.57
TOP3B-211ENST00000449704 NEDD1Q8NHV4 660 aa18.63■□□□□ 0.57
TOP3B-211ENST00000449704 CD99L2Q8TCZ2 262 aa18.63■□□□□ 0.57
TOP3B-211ENST00000449704 ERO1AQ96HE7 468 aa18.63■□□□□ 0.57
TOP3B-211ENST00000449704 ORC4O43929 436 aa18.62■□□□□ 0.57
TOP3B-211ENST00000449704 RAD21O60216 631 aa18.62■□□□□ 0.57
TOP3B-211ENST00000449704 ECM2O94769 699 aaPredicted RBP18.62■□□□□ 0.57
TOP3B-211ENST00000449704 VCAM1P19320 739 aa18.62■□□□□ 0.57
TOP3B-211ENST00000449704 HOXA7P31268 230 aaPredicted RBP18.62■□□□□ 0.57
TOP3B-211ENST00000449704 IMMTQ16891 758 aaKnown RBP18.62■□□□□ 0.57
TOP3B-211ENST00000449704 AKNAD1Q5T1N1 836 aa18.62■□□□□ 0.57
TOP3B-211ENST00000449704 MFSD6Q6ZSS7 791 aa18.62■□□□□ 0.57
TOP3B-211ENST00000449704 CTU1Q7Z7A3 348 aaKnown RBP18.62■□□□□ 0.57
TOP3B-211ENST00000449704 SPICE1Q8N0Z3 855 aa18.62■□□□□ 0.57
TOP3B-211ENST00000449704 P2RX7Q99572 595 aaKnown RBP18.62■□□□□ 0.57
TOP3B-211ENST00000449704 CLIP2Q9UDT6 1046 aa18.62■□□□□ 0.57
TOP3B-211ENST00000449704 TMX2Q9Y320 296 aa18.62■□□□□ 0.57
TOP3B-211ENST00000449704 ADGRA2Q96PE1 1338 aa18.62■□□□□ 0.57
TOP3B-211ENST00000449704 PHIPQ8WWQ0 1821 aa18.62■□□□□ 0.57
TOP3B-211ENST00000449704 ATAD5Q96QE3 1844 aa18.62■□□□□ 0.57
TOP3B-211ENST00000449704 CASP8AP2Q9UKL3 1982 aa18.61■□□□□ 0.57
TOP3B-211ENST00000449704 IGKV6D-41A0A0C4DH26 115 aa18.61■□□□□ 0.57
TOP3B-211ENST00000449704 USP17L15C9J2P7 530 aa18.61■□□□□ 0.57
TOP3B-211ENST00000449704 USP17L13C9JLJ4 530 aa18.61■□□□□ 0.57
TOP3B-211ENST00000449704 USP17L11C9JVI0 530 aa18.61■□□□□ 0.57
TOP3B-211ENST00000449704 USP17L18D6R9N7 530 aa18.61■□□□□ 0.57
TOP3B-211ENST00000449704 USP17L22D6RA61 530 aa18.61■□□□□ 0.57
TOP3B-211ENST00000449704 USP17L17D6RBQ6 530 aa18.61■□□□□ 0.57
TOP3B-211ENST00000449704 USP17L19D6RCP7 530 aa18.61■□□□□ 0.57
TOP3B-211ENST00000449704 USP17L20D6RJB6 530 aa18.61■□□□□ 0.57
TOP3B-211ENST00000449704 PTH1RQ03431 593 aa18.61■□□□□ 0.57
TOP3B-211ENST00000449704 USP17L24Q0WX57 530 aa18.61■□□□□ 0.57
TOP3B-211ENST00000449704 KIAA1755Q5JYT7 1200 aa18.61■□□□□ 0.57
TOP3B-211ENST00000449704 KIAA1211Q6ZU35 1233 aa18.61■□□□□ 0.57
TOP3B-211ENST00000449704 TBC1D10CQ8IV04 446 aa18.61■□□□□ 0.57
TOP3B-211ENST00000449704 ANKRD13CQ8N6S4 541 aa18.61■□□□□ 0.57
TOP3B-211ENST00000449704 CEP95Q96GE4 821 aa18.61■□□□□ 0.57
TOP3B-211ENST00000449704 NBPF3Q9H094 633 aa18.61■□□□□ 0.57
TOP3B-211ENST00000449704 RNF41Q9H4P4 317 aaPredicted RBP18.61■□□□□ 0.57
TOP3B-211ENST00000449704 RPAP3Q9H6T3 665 aaPredicted RBP18.61■□□□□ 0.57
TOP3B-211ENST00000449704 VCPKMTQ9H867 229 aa18.61■□□□□ 0.57
TOP3B-211ENST00000449704 MTMR4Q9NYA4 1195 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms