RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 C17orf99Q6UX52 265 aa14.28□□□□□ -0.12
LSP1P3-201ENST00000449530 C16orf86Q6ZW13 317 aa14.28□□□□□ -0.12
LSP1P3-201ENST00000449530 CLEC10AQ8IUN9 316 aa14.28□□□□□ -0.12
LSP1P3-201ENST00000449530 STK11IPQ8N1F8 1099 aa14.28□□□□□ -0.12
LSP1P3-201ENST00000449530 RILPL2Q969X0 211 aa14.28□□□□□ -0.12
LSP1P3-201ENST00000449530 ROBO3Q96MS0 1386 aa14.28□□□□□ -0.12
LSP1P3-201ENST00000449530 TAOK2Q9UL54 1235 aa14.28□□□□□ -0.12
LSP1P3-201ENST00000449530 A0A0D9SFI3 127 aa14.27□□□□□ -0.13
LSP1P3-201ENST00000449530 C19orf81C9J6K1 198 aa14.27□□□□□ -0.13
LSP1P3-201ENST00000449530 BCRP11274 1271 aa14.27□□□□□ -0.13
LSP1P3-201ENST00000449530 USP17L2Q6R6M4 530 aa14.27□□□□□ -0.13
LSP1P3-201ENST00000449530 ACER1Q8TDN7 264 aa14.27□□□□□ -0.13
LSP1P3-201ENST00000449530 OSBPP22059 807 aa14.26□□□□□ -0.13
LSP1P3-201ENST00000449530 PDE4AP27815 886 aa14.26□□□□□ -0.13
LSP1P3-201ENST00000449530 IRX3P78415 501 aaPredicted RBP14.26□□□□□ -0.13
LSP1P3-201ENST00000449530 SBK1Q52WX2 424 aa14.26□□□□□ -0.13
LSP1P3-201ENST00000449530 HABP4Q5JVS0 413 aaKnown RBP14.26□□□□□ -0.13
LSP1P3-201ENST00000449530 TMEM179Q6ZVK1 233 aa14.26□□□□□ -0.13
LSP1P3-201ENST00000449530 IFNL3Q8IZI9 196 aa14.26□□□□□ -0.13
LSP1P3-201ENST00000449530 FAM227BQ96M60 508 aa14.26□□□□□ -0.13
LSP1P3-201ENST00000449530 NACAP1Q9BZK3 213 aa14.26□□□□□ -0.13
LSP1P3-201ENST00000449530 NAPBQ9H115 298 aa14.26□□□□□ -0.13
LSP1P3-201ENST00000449530 ASCC2Q9H1I8 757 aaPredicted RBP14.26□□□□□ -0.13
LSP1P3-201ENST00000449530 OSBPL3Q9H4L5 887 aa14.26□□□□□ -0.13
LSP1P3-201ENST00000449530 LAMA4Q16363 1823 aa14.25□□□□□ -0.13
LSP1P3-201ENST00000449530 PATL2C9JE40 543 aaKnown RBP14.25□□□□□ -0.13
LSP1P3-201ENST00000449530 CTGFP29279 349 aa14.25□□□□□ -0.13
LSP1P3-201ENST00000449530 USP14P54578 494 aa14.25□□□□□ -0.13
LSP1P3-201ENST00000449530 ICA1Q05084 483 aa14.25□□□□□ -0.13
LSP1P3-201ENST00000449530 NMIQ13287 307 aaPredicted RBP14.25□□□□□ -0.13
LSP1P3-201ENST00000449530 ARHGEF6Q15052 776 aa14.25□□□□□ -0.13
LSP1P3-201ENST00000449530 ANKRD13CQ8N6S4 541 aa14.25□□□□□ -0.13
LSP1P3-201ENST00000449530 TRIM47Q96LD4 638 aa14.25□□□□□ -0.13
LSP1P3-201ENST00000449530 CCDC17Q96LX7 622 aa14.25□□□□□ -0.13
LSP1P3-201ENST00000449530 KIAA1683Q9H0B3 1180 aa14.25□□□□□ -0.13
LSP1P3-201ENST00000449530 HELLSQ9NRZ9 838 aa14.25□□□□□ -0.13
LSP1P3-201ENST00000449530 EMILIN3Q9NT22 766 aa14.25□□□□□ -0.13
LSP1P3-201ENST00000449530 PTPN22Q9Y2R2 807 aa14.25□□□□□ -0.13
LSP1P3-201ENST00000449530 MYH4Q9Y623 1939 aa14.25□□□□□ -0.13
LSP1P3-201ENST00000449530 FOXP2O15409 715 aa14.24□□□□□ -0.13
LSP1P3-201ENST00000449530 VCAM1P19320 739 aa14.24□□□□□ -0.13
LSP1P3-201ENST00000449530 PSMC4P43686 418 aa14.24□□□□□ -0.13
LSP1P3-201ENST00000449530 VPS53Q5VIR6 699 aa14.24□□□□□ -0.13
LSP1P3-201ENST00000449530 C12orf42Q96LP6 360 aa14.24□□□□□ -0.13
LSP1P3-201ENST00000449530 PTCH2Q9Y6C5 1203 aa14.24□□□□□ -0.13
LSP1P3-201ENST00000449530 PARP14Q460N5 1801 aa14.24□□□□□ -0.13
LSP1P3-201ENST00000449530 A0A0G2JMZ2 1700 aa14.24□□□□□ -0.13
LSP1P3-201ENST00000449530 A0A1W2PRG0 241 aa14.23□□□□□ -0.13
LSP1P3-201ENST00000449530 FMNL1O95466 1100 aaPredicted RBP14.23□□□□□ -0.13
LSP1P3-201ENST00000449530 RASA1P20936 1047 aa14.23□□□□□ -0.13
LSP1P3-201ENST00000449530 HOXA7P31268 230 aaPredicted RBP14.23□□□□□ -0.13
LSP1P3-201ENST00000449530 GCLCP48506 637 aaPredicted RBP14.23□□□□□ -0.13
LSP1P3-201ENST00000449530 FCGRTP55899 365 aa14.23□□□□□ -0.13
LSP1P3-201ENST00000449530 ATP2B2Q01814 1243 aa14.23□□□□□ -0.13
LSP1P3-201ENST00000449530 PPARAQ07869 468 aa14.23□□□□□ -0.13
LSP1P3-201ENST00000449530 FAM110CQ1W6H9 321 aa14.23□□□□□ -0.13
LSP1P3-201ENST00000449530 MCMDC2Q4G0Z9 681 aa14.23□□□□□ -0.13
LSP1P3-201ENST00000449530 ZNF589Q86UQ0 364 aaPredicted RBP14.23□□□□□ -0.13
LSP1P3-201ENST00000449530 MKNK2Q9HBH9 465 aa14.23□□□□□ -0.13
LSP1P3-201ENST00000449530 ARHGEF10LQ9HCE6 1279 aa14.23□□□□□ -0.13
LSP1P3-201ENST00000449530 RBBP6Q7Z6E9 1792 aaKnown RBP14.22□□□□□ -0.13
LSP1P3-201ENST00000449530 CCDC171Q6TFL3 1326 aa14.22□□□□□ -0.13
LSP1P3-201ENST00000449530 MYPNQ86TC9 1320 aa14.22□□□□□ -0.13
LSP1P3-201ENST00000449530 PRDM1O75626 825 aa14.22□□□□□ -0.13
LSP1P3-201ENST00000449530 GNRH1P01148 92 aa14.22□□□□□ -0.13
LSP1P3-201ENST00000449530 SDSP20132 328 aa14.22□□□□□ -0.13
LSP1P3-201ENST00000449530 HERVK_113P62684 666 aa14.22□□□□□ -0.13
LSP1P3-201ENST00000449530 TTC22Q5TAA0 569 aa14.22□□□□□ -0.13
LSP1P3-201ENST00000449530 TICAM2Q86XR7 235 aa14.22□□□□□ -0.13
LSP1P3-201ENST00000449530 P2RX7Q99572 595 aaKnown RBP14.22□□□□□ -0.13
LSP1P3-201ENST00000449530 RPAP3Q9H6T3 665 aaPredicted RBP14.22□□□□□ -0.13
LSP1P3-201ENST00000449530 DIAPH3Q9NSV4 1193 aa14.22□□□□□ -0.13
LSP1P3-201ENST00000449530 HTTP42858 3142 aa14.21□□□□□ -0.13
LSP1P3-201ENST00000449530 USP17L15C9J2P7 530 aa14.21□□□□□ -0.13
LSP1P3-201ENST00000449530 USP17L13C9JLJ4 530 aa14.21□□□□□ -0.13
LSP1P3-201ENST00000449530 USP17L11C9JVI0 530 aa14.21□□□□□ -0.13
LSP1P3-201ENST00000449530 USP17L18D6R9N7 530 aa14.21□□□□□ -0.13
LSP1P3-201ENST00000449530 USP17L22D6RA61 530 aa14.21□□□□□ -0.13
LSP1P3-201ENST00000449530 USP17L17D6RBQ6 530 aa14.21□□□□□ -0.13
LSP1P3-201ENST00000449530 USP17L19D6RCP7 530 aa14.21□□□□□ -0.13
LSP1P3-201ENST00000449530 USP17L20D6RJB6 530 aa14.21□□□□□ -0.13
LSP1P3-201ENST00000449530 TNPO2O14787 897 aaKnown RBP14.21□□□□□ -0.13
LSP1P3-201ENST00000449530 PEX10O60683 326 aa14.21□□□□□ -0.13
LSP1P3-201ENST00000449530 SLC3A2P08195 630 aaKnown RBP14.21□□□□□ -0.13
LSP1P3-201ENST00000449530 GSPT1P15170 499 aaKnown RBP14.21□□□□□ -0.13
LSP1P3-201ENST00000449530 USP17L24Q0WX57 530 aa14.21□□□□□ -0.13
LSP1P3-201ENST00000449530 SH2D4AQ9H788 454 aa14.21□□□□□ -0.13
LSP1P3-201ENST00000449530 ZNF287Q9HBT7 754 aa14.21□□□□□ -0.13
LSP1P3-201ENST00000449530 RLFQ13129 1914 aa14.21□□□□□ -0.14
LSP1P3-201ENST00000449530 EEF2P13639 858 aaKnown RBP14.2□□□□□ -0.14
LSP1P3-201ENST00000449530 PRKCZQ05513 592 aa14.2□□□□□ -0.14
LSP1P3-201ENST00000449530 PDE4BQ07343 736 aa14.2□□□□□ -0.14
LSP1P3-201ENST00000449530 SLC9C1Q4G0N8 1177 aa14.2□□□□□ -0.14
LSP1P3-201ENST00000449530 CWC27Q6UX04 472 aaKnown RBP14.2□□□□□ -0.14
LSP1P3-201ENST00000449530 SIAH1Q8IUQ4 282 aa14.2□□□□□ -0.14
LSP1P3-201ENST00000449530 SPICE1Q8N0Z3 855 aa14.2□□□□□ -0.14
LSP1P3-201ENST00000449530 PAGR1Q9BTK6 254 aa14.2□□□□□ -0.14
LSP1P3-201ENST00000449530 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.2□□□□□ -0.14
LSP1P3-201ENST00000449530 TANGO6Q9C0B7 1094 aa14.2□□□□□ -0.14
LSP1P3-201ENST00000449530 KANSL2Q9H9L4 492 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms